RNA–Protein interactions for RNA: ENSMUST00000111043.8

Bdnf-203, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,839 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-203ENSMUST00000111043 Dusp27Q148W8 1138 aa9.43□□□□□ -0.9
Bdnf-203ENSMUST00000111043 Ksr2Q3UVC0 959 aa9.43□□□□□ -0.9
Bdnf-203ENSMUST00000111043 Dennd6aQ8BH65 605 aa9.43□□□□□ -0.9
Bdnf-203ENSMUST00000111043 Adgrl1Q80TR1 1466 aa9.43□□□□□ -0.9
Bdnf-203ENSMUST00000111043 Pibf1E9Q6K3 756 aa9.43□□□□□ -0.9
Bdnf-203ENSMUST00000111043 Fyb1O35601 819 aa9.43□□□□□ -0.9
Bdnf-203ENSMUST00000111043 DmtnQ9WV69 405 aa9.43□□□□□ -0.9
Bdnf-203ENSMUST00000111043 Ythdc1E9Q5K9 736 aaKnown RBP9.42□□□□□ -0.9
Bdnf-203ENSMUST00000111043 AampJ3QN89 436 aa9.42□□□□□ -0.9
Bdnf-203ENSMUST00000111043 NktrP30415 1453 aa9.42□□□□□ -0.9
Bdnf-203ENSMUST00000111043 Uspl1Q3ULM6 1089 aa9.42□□□□□ -0.9
Bdnf-203ENSMUST00000111043 Cabp2Q9JLK4 216 aa9.41□□□□□ -0.9
Bdnf-203ENSMUST00000111043 AcrbpQ3V140 540 aa9.41□□□□□ -0.9
Bdnf-203ENSMUST00000111043 Rapgef3Q8VCC8 918 aa9.41□□□□□ -0.9
Bdnf-203ENSMUST00000111043 Usp19Q3UJD6 1360 aa9.41□□□□□ -0.9
Bdnf-203ENSMUST00000111043 Rabep1O35551 862 aa9.41□□□□□ -0.9
Bdnf-203ENSMUST00000111043 U2surpQ6NV83 1029 aaKnown RBP9.41□□□□□ -0.9
Bdnf-203ENSMUST00000111043 Atf3Q60765 181 aa9.4□□□□□ -0.9
Bdnf-203ENSMUST00000111043 Alpk3Q924C5 1678 aa9.4□□□□□ -0.9
Bdnf-203ENSMUST00000111043 Slit3Q9WVB4 1523 aa9.4□□□□□ -0.9
Bdnf-203ENSMUST00000111043 Frmpd2A0A140LI67 1392 aa9.4□□□□□ -0.9
Bdnf-203ENSMUST00000111043 Eif2ak4Q9QZ05 1648 aa9.4□□□□□ -0.9
Bdnf-203ENSMUST00000111043 Ccne1Q61457 408 aa9.4□□□□□ -0.9
Bdnf-203ENSMUST00000111043 Smc5Q8CG46 1101 aaKnown RBP9.4□□□□□ -0.9
Bdnf-203ENSMUST00000111043 Tmc1Q8R4P5 757 aa9.4□□□□□ -0.9
Bdnf-203ENSMUST00000111043 Armcx1Q9CX83 456 aa9.4□□□□□ -0.9
Bdnf-203ENSMUST00000111043 Ift172Q6VH22 1749 aa9.4□□□□□ -0.9
Bdnf-203ENSMUST00000111043 Larp1bA0A0A6YXJ7 370 aaKnown RBP9.4□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Ppp1r9bQ6R891 817 aaKnown RBP9.4□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Atf7ipQ7TT18 1306 aa9.39□□□□□ -0.91
Bdnf-203ENSMUST00000111043 PtmaP26350 111 aa9.39□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Nlgn1Q99K10 843 aa9.39□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Pik3c2bE9QAN8 1632 aa9.39□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Tnnt2P50752 301 aa9.39□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Isy1Q69ZQ2 285 aaKnown RBP9.39□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Znf330Q922H9 316 aa9.39□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Uhrf1bp1lA2RSJ4 1457 aa9.39□□□□□ -0.91
Bdnf-203ENSMUST00000111043 SlkO54988 1233 aa9.39□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Tpm2P58774 284 aa9.39□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Nwd1A6H603 1563 aa9.39□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Gemin5Q8BX17 1502 aaKnown RBP9.38□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Eif4a2P10630 407 aa9.38□□□□□ -0.91
Bdnf-203ENSMUST00000111043 VgfQ0VGU4 617 aa9.38□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Tns3Q5SSZ5 1440 aa9.38□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Nrxn1Q9CS84 1514 aa9.38□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Topaz1E5FYH1 1653 aa9.38□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Slc34a2Q9DBP0 697 aa9.38□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Pik3r4Q8VD65 1358 aa9.38□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Snap23O09044 210 aa9.38□□□□□ -0.91
Bdnf-203ENSMUST00000111043 PtpruB1AUH1 1446 aa9.37□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Rsph6aQ8CDR2 708 aa9.37□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Acsbg1Q99PU5 721 aa9.37□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Ciz1Q8VEH2 845 aa9.37□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Mfap1aC0HKD8 439 aaKnown RBP9.36□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Mfap1bC0HKD9 439 aaKnown RBP9.36□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Sptbn5F6UCX4 1208 aa9.36□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Ralbp1Q62172 648 aa9.36□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Amigo3Q8C2S7 508 aa9.36□□□□□ -0.91
Bdnf-203ENSMUST00000111043 TatQ8QZR1 454 aa9.36□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Farp2Q91VS8 1065 aa9.36□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Klhdc4Q921I2 584 aa9.36□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Rims2Q9EQZ7 1530 aa9.36□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Usp32F8VPZ3 1604 aa9.36□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Ppp1r15aP17564 657 aa9.36□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Nectin2P32507 530 aa9.36□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Trim28Q62318 834 aa9.36□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Paxip1Q6NZQ4 1056 aa9.36□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Erich6bQ9D4S6 220 aa9.36□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Rreb1Q3UH06 1700 aaKnown RBP9.36□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Map4k4P97820 1233 aaKnown RBP9.36□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Tmco5bQ80X59 307 aa9.36□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Pank1Q8K4K6 548 aa9.36□□□□□ -0.91
Bdnf-203ENSMUST00000111043 KnstrnQ9D9Z1 312 aaKnown RBP9.36□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Trim58Q5NCC9 485 aa9.35□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Bcl11bQ99PV8 884 aa9.35□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Cps1Q8C196 1500 aa9.35□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Gpatch11Q3UFS4 262 aa9.35□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Stk31Q99MW1 1018 aa9.35□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Zmym3Q9JLM4 1370 aa9.35□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Tnpo1Q8BFY9 898 aaKnown RBP9.35□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Dnajc10Q9DC23 793 aa9.35□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Bcl9Q9D219 1425 aa9.34□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Cavin4A2AMM0 362 aa9.34□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Rsph3aQ3UFY4 516 aa9.34□□□□□ -0.91
Bdnf-203ENSMUST00000111043 FancaQ9JL70 1439 aa9.34□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Dixdc1Q80Y83 711 aa9.34□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Ush1cQ9ES64 910 aa9.34□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Nutm1Q8BHP2 1126 aa9.34□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Atl3Q91YH5 541 aa9.34□□□□□ -0.91
Bdnf-203ENSMUST00000111043 KarsQ99MN1 595 aaKnown RBP9.34□□□□□ -0.91
Bdnf-203ENSMUST00000111043 Chd4Q6PDQ2 1915 aaKnown RBP9.33□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Ppp2r3aB2RXC8 1150 aa9.33□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Tnnt1O88346 262 aa9.33□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Ggnbp2Q5SV77 696 aa9.33□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Ccdc60Q8C4J0 545 aa9.33□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Amotl2Q8K371 772 aa9.33□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Sirt1Q923E4 737 aa9.33□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Med1Q925J9 1575 aa9.33□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Eya1P97767 591 aa9.33□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Kiaa1211Q5PR69 1207 aa9.33□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 20.7 ms