RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Sart3Q9JLI8 962 aaKnown RBP19.75■□□□□ 0.75
Vcan-201ENSMUST00000109543 Pnmal2G3X9N3 661 aa19.74■□□□□ 0.75
Vcan-201ENSMUST00000109543 Tmc1Q8R4P5 757 aa19.74■□□□□ 0.75
Vcan-201ENSMUST00000109543 Q3UPC7 1272 aa19.73■□□□□ 0.75
Vcan-201ENSMUST00000109543 Usp16Q99LG0 825 aa19.73■□□□□ 0.75
Vcan-201ENSMUST00000109543 Znf335A2A5K6 1337 aa19.73■□□□□ 0.75
Vcan-201ENSMUST00000109543 Sox12Q04890 314 aa19.73■□□□□ 0.75
Vcan-201ENSMUST00000109543 U2surpQ6NV83 1029 aaKnown RBP19.73■□□□□ 0.75
Vcan-201ENSMUST00000109543 Stk31Q99MW1 1018 aa19.73■□□□□ 0.75
Vcan-201ENSMUST00000109543 Aldh1l1Q8R0Y6 902 aa19.72■□□□□ 0.75
Vcan-201ENSMUST00000109543 Hs1bp3Q3TC93 395 aa19.71■□□□□ 0.75
Vcan-201ENSMUST00000109543 Med1Q925J9 1575 aa19.7■□□□□ 0.74
Vcan-201ENSMUST00000109543 Klhdc4Q921I2 584 aa19.7■□□□□ 0.74
Vcan-201ENSMUST00000109543 Idi1P58044 227 aa19.69■□□□□ 0.74
Vcan-201ENSMUST00000109543 Abcc10Q8R4P9 1501 aa19.68■□□□□ 0.74
Vcan-201ENSMUST00000109543 MvpQ9EQK5 861 aa19.68■□□□□ 0.74
Vcan-201ENSMUST00000109543 CemipQ8BI06 1361 aa19.68■□□□□ 0.74
Vcan-201ENSMUST00000109543 D430041D05RikF6ZGR6 1678 aa19.67■□□□□ 0.74
Vcan-201ENSMUST00000109543 Phlpp2Q8BXA7 1320 aa19.67■□□□□ 0.74
Vcan-201ENSMUST00000109543 Sos1Q62245 1319 aa19.67■□□□□ 0.74
Vcan-201ENSMUST00000109543 Mdc1Q5PSV9 1707 aa19.67■□□□□ 0.74
Vcan-201ENSMUST00000109543 Cdk12Q14AX6 1484 aaKnown RBP19.66■□□□□ 0.74
Vcan-201ENSMUST00000109543 NalcnQ8BXR5 1738 aa19.66■□□□□ 0.74
Vcan-201ENSMUST00000109543 Mre11Q61216 706 aa19.66■□□□□ 0.74
Vcan-201ENSMUST00000109543 Pik3c2aQ61194 1686 aa19.66■□□□□ 0.74
Vcan-201ENSMUST00000109543 Gm10563F6WIE4 79 aa19.65■□□□□ 0.74
Vcan-201ENSMUST00000109543 Kif20bQ80WE4 1774 aaKnown RBP19.64■□□□□ 0.74
Vcan-201ENSMUST00000109543 Ankrd44B2RXR6 993 aa19.64■□□□□ 0.74
Vcan-201ENSMUST00000109543 Ppp1r9bQ6R891 817 aaKnown RBP19.64■□□□□ 0.74
Vcan-201ENSMUST00000109543 Dennd6aQ8BH65 605 aa19.64■□□□□ 0.74
Vcan-201ENSMUST00000109543 4930407I10RikD3Z5T8 1512 aa19.64■□□□□ 0.73
Vcan-201ENSMUST00000109543 SkilQ60665 675 aa19.64■□□□□ 0.73
Vcan-201ENSMUST00000109543 Ubr1O70481 1757 aa19.63■□□□□ 0.73
Vcan-201ENSMUST00000109543 C5P06684 1680 aa19.63■□□□□ 0.73
Vcan-201ENSMUST00000109543 ArxO35085 564 aa19.63■□□□□ 0.73
Vcan-201ENSMUST00000109543 Col16a1Q8BLX7 1580 aa19.62■□□□□ 0.73
Vcan-201ENSMUST00000109543 Map7O88735 730 aa19.62■□□□□ 0.73
Vcan-201ENSMUST00000109543 TmpoQ61033 693 aaKnown RBP19.62■□□□□ 0.73
Vcan-201ENSMUST00000109543 Cavin2Q63918 418 aaKnown RBP19.62■□□□□ 0.73
Vcan-201ENSMUST00000109543 Mon2Q80TL7 1715 aa19.62■□□□□ 0.73
Vcan-201ENSMUST00000109543 Hsp90aa1P07901 733 aaKnown RBP19.62■□□□□ 0.73
Vcan-201ENSMUST00000109543 Cabp4Q8VHC5 271 aa19.62■□□□□ 0.73
Vcan-201ENSMUST00000109543 Als2Q920R0 1651 aa19.62■□□□□ 0.73
Vcan-201ENSMUST00000109543 Tbc1d32Q3URV1 1296 aa19.61■□□□□ 0.73
Vcan-201ENSMUST00000109543 Kif18aQ91WD7 886 aa19.61■□□□□ 0.73
Vcan-201ENSMUST00000109543 Nlgn1Q99K10 843 aa19.61■□□□□ 0.73
Vcan-201ENSMUST00000109543 Ap3b2Q9JME5 1082 aa19.61■□□□□ 0.73
Vcan-201ENSMUST00000109543 FancaQ9JL70 1439 aa19.61■□□□□ 0.73
Vcan-201ENSMUST00000109543 1700019A02RikA0A087WPV9 146 aa19.6■□□□□ 0.73
Vcan-201ENSMUST00000109543 Gm21190A0A0G2JGJ6 266 aa19.6■□□□□ 0.73
Vcan-201ENSMUST00000109543 Nckap5lQ6GQX2 1323 aa19.6■□□□□ 0.73
Vcan-201ENSMUST00000109543 Ric3Q8BPM6 367 aa19.6■□□□□ 0.73
Vcan-201ENSMUST00000109543 Chmp4bQ9D8B3 224 aaKnown RBP19.6■□□□□ 0.73
Vcan-201ENSMUST00000109543 Map2P20357 1828 aa19.6■□□□□ 0.73
Vcan-201ENSMUST00000109543 MarsQ68FL6 902 aaKnown RBP19.59■□□□□ 0.73
Vcan-201ENSMUST00000109543 Parp14Q2EMV9 1817 aa19.59■□□□□ 0.73
Vcan-201ENSMUST00000109543 Frmpd2A0A140LI67 1392 aa19.59■□□□□ 0.73
Vcan-201ENSMUST00000109543 Camta1A2A891 1682 aa19.59■□□□□ 0.73
Vcan-201ENSMUST00000109543 MyclP10166 368 aa19.58■□□□□ 0.73
Vcan-201ENSMUST00000109543 Tmem94Q7TSH8 1360 aa19.58■□□□□ 0.73
Vcan-201ENSMUST00000109543 Rims2Q9EQZ7 1530 aa19.58■□□□□ 0.73
Vcan-201ENSMUST00000109543 Mfap1aC0HKD8 439 aaKnown RBP19.58■□□□□ 0.72
Vcan-201ENSMUST00000109543 Mfap1bC0HKD9 439 aaKnown RBP19.58■□□□□ 0.72
Vcan-201ENSMUST00000109543 Brd1E9PZ26 1189 aaKnown RBP19.58■□□□□ 0.72
Vcan-201ENSMUST00000109543 GphnQ8BUV3 769 aaKnown RBP19.58■□□□□ 0.72
Vcan-201ENSMUST00000109543 Pibf1E9Q6K3 756 aa19.57■□□□□ 0.72
Vcan-201ENSMUST00000109543 Eya1P97767 591 aa19.56■□□□□ 0.72
Vcan-201ENSMUST00000109543 Ggnbp2Q5SV77 696 aa19.56■□□□□ 0.72
Vcan-201ENSMUST00000109543 Cog6Q8R3I3 657 aa19.56■□□□□ 0.72
Vcan-201ENSMUST00000109543 Sptbn5F6UCX4 1208 aa19.56■□□□□ 0.72
Vcan-201ENSMUST00000109543 Rabep1O35551 862 aa19.56■□□□□ 0.72
Vcan-201ENSMUST00000109543 Scn7aB1AYL1 1681 aa19.55■□□□□ 0.72
Vcan-201ENSMUST00000109543 Zfp777B9EKF4 885 aa19.55■□□□□ 0.72
Vcan-201ENSMUST00000109543 Aplp1Q03157 653 aa19.55■□□□□ 0.72
Vcan-201ENSMUST00000109543 Wwc1Q5SXA9 1104 aa19.55■□□□□ 0.72
Vcan-201ENSMUST00000109543 Kif24Q6NWW5 1356 aa19.55■□□□□ 0.72
Vcan-201ENSMUST00000109543 Aifm3Q3TY86 605 aa19.54■□□□□ 0.72
Vcan-201ENSMUST00000109543 Lmtk3Q5XJV6 1424 aa19.54■□□□□ 0.72
Vcan-201ENSMUST00000109543 Rtf1A2AQ19 715 aaKnown RBP19.53■□□□□ 0.72
Vcan-201ENSMUST00000109543 Chl1P70232 1209 aa19.53■□□□□ 0.72
Vcan-201ENSMUST00000109543 Ccne1Q61457 408 aa19.53■□□□□ 0.72
Vcan-201ENSMUST00000109543 Tnpo1Q8BFY9 898 aaKnown RBP19.53■□□□□ 0.72
Vcan-201ENSMUST00000109543 Slit2Q9R1B9 1521 aa19.53■□□□□ 0.72
Vcan-201ENSMUST00000109543 Snap23O09044 210 aa19.53■□□□□ 0.72
Vcan-201ENSMUST00000109543 Prim1P20664 417 aa19.53■□□□□ 0.72
Vcan-201ENSMUST00000109543 KnstrnQ9D9Z1 312 aaKnown RBP19.53■□□□□ 0.72
Vcan-201ENSMUST00000109543 DaxxO35613 739 aa19.52■□□□□ 0.72
Vcan-201ENSMUST00000109543 Bcl9Q9D219 1425 aa19.52■□□□□ 0.72
Vcan-201ENSMUST00000109543 Trim27Q62158 513 aa19.51■□□□□ 0.71
Vcan-201ENSMUST00000109543 Slc35g1Q8BY79 368 aa19.51■□□□□ 0.71
Vcan-201ENSMUST00000109543 Tet3Q8BG87 1668 aa19.51■□□□□ 0.71
Vcan-201ENSMUST00000109543 Adgrb1Q3UHD1 1582 aa19.51■□□□□ 0.71
Vcan-201ENSMUST00000109543 LifrP42703 1092 aa19.51■□□□□ 0.71
Vcan-201ENSMUST00000109543 Hoxc9P09633 260 aa19.5■□□□□ 0.71
Vcan-201ENSMUST00000109543 Cetn4Q8K4K1 168 aa19.5■□□□□ 0.71
Vcan-201ENSMUST00000109543 CarsQ9ER72 831 aaKnown RBP19.5■□□□□ 0.71
Vcan-201ENSMUST00000109543 PtprvP70289 1705 aa19.5■□□□□ 0.71
Vcan-201ENSMUST00000109543 Larp1bA0A0A6YXJ7 370 aaKnown RBP19.48■□□□□ 0.71
Vcan-201ENSMUST00000109543 Rab11fip3Q8CHD8 1047 aa19.48■□□□□ 0.71
Vcan-201ENSMUST00000109543 Aldh1l2Q8K009 923 aa19.48■□□□□ 0.71
Retrieved 100 of 22,080 RNA–protein pairs in 234.5 ms