RNA–Protein interactions for RNA: ENSMUST00000087158.10

Trim40-201, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Trim40, Length 2,117 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-201ENSMUST00000087158 Pik3c2aQ61194 1686 aa9.76□□□□□ -0.85
Trim40-201ENSMUST00000087158 Kcnh8P59111 1102 aa9.76□□□□□ -0.85
Trim40-201ENSMUST00000087158 Q4VA45 678 aa9.76□□□□□ -0.85
Trim40-201ENSMUST00000087158 Rsph6aQ8CDR2 708 aa9.76□□□□□ -0.85
Trim40-201ENSMUST00000087158 Unc13bQ9Z1N9 1602 aa9.76□□□□□ -0.85
Trim40-201ENSMUST00000087158 Gas2l2Q5SSG4 860 aa9.76□□□□□ -0.85
Trim40-201ENSMUST00000087158 C3P01027 1663 aa9.76□□□□□ -0.85
Trim40-201ENSMUST00000087158 Ltbp4Q8K4G1 1666 aa9.76□□□□□ -0.85
Trim40-201ENSMUST00000087158 Ubr1O70481 1757 aa9.75□□□□□ -0.85
Trim40-201ENSMUST00000087158 Col16a1Q8BLX7 1580 aa9.75□□□□□ -0.85
Trim40-201ENSMUST00000087158 Phlpp1Q8CHE4 1687 aa9.75□□□□□ -0.85
Trim40-201ENSMUST00000087158 Nrxn3Q6P9K9 1571 aa9.75□□□□□ -0.85
Trim40-201ENSMUST00000087158 Ksr2Q3UVC0 959 aa9.74□□□□□ -0.85
Trim40-201ENSMUST00000087158 Scaf1Q5U4C3 1256 aaKnown RBP9.74□□□□□ -0.85
Trim40-201ENSMUST00000087158 Swt1Q9DBQ9 907 aa9.74□□□□□ -0.85
Trim40-201ENSMUST00000087158 Ccar1Q8CH18 1146 aaKnown RBP9.74□□□□□ -0.85
Trim40-201ENSMUST00000087158 Ccdc9Q8VC31 543 aaKnown RBP9.74□□□□□ -0.85
Trim40-201ENSMUST00000087158 Map2P20357 1828 aa9.73□□□□□ -0.85
Trim40-201ENSMUST00000087158 Zfp777B9EKF4 885 aa9.73□□□□□ -0.85
Trim40-201ENSMUST00000087158 Slc4a3P16283 1227 aa9.73□□□□□ -0.85
Trim40-201ENSMUST00000087158 Atp7bQ64446 1462 aa9.73□□□□□ -0.85
Trim40-201ENSMUST00000087158 Scn7aB1AYL1 1681 aa9.73□□□□□ -0.85
Trim40-201ENSMUST00000087158 Apbb1Q9QXJ1 710 aa9.73□□□□□ -0.85
Trim40-201ENSMUST00000087158 Sipa1l2Q80TE4 1722 aa9.72□□□□□ -0.85
Trim40-201ENSMUST00000087158 Dennd6aQ8BH65 605 aa9.72□□□□□ -0.85
Trim40-201ENSMUST00000087158 Q8BT18 775 aa9.72□□□□□ -0.85
Trim40-201ENSMUST00000087158 Frmpd2A0A140LI67 1392 aa9.72□□□□□ -0.85
Trim40-201ENSMUST00000087158 Ttc21aQ8C0S4 1314 aa9.72□□□□□ -0.85
Trim40-201ENSMUST00000087158 Tmem2Q5FWI3 1383 aa9.71□□□□□ -0.85
Trim40-201ENSMUST00000087158 Eif4a2P10630 407 aa9.71□□□□□ -0.85
Trim40-201ENSMUST00000087158 Rad17Q6NXW6 688 aa9.71□□□□□ -0.85
Trim40-201ENSMUST00000087158 Nlgn1Q99K10 843 aa9.71□□□□□ -0.85
Trim40-201ENSMUST00000087158 Ankrd50F7BE84 1390 aa9.71□□□□□ -0.86
Trim40-201ENSMUST00000087158 NudcO35685 332 aaKnown RBP9.71□□□□□ -0.86
Trim40-201ENSMUST00000087158 Iqcf3Q9D498 203 aa9.71□□□□□ -0.86
Trim40-201ENSMUST00000087158 Trim58Q5NCC9 485 aa9.7□□□□□ -0.86
Trim40-201ENSMUST00000087158 Camta1A2A891 1682 aa9.7□□□□□ -0.86
Trim40-201ENSMUST00000087158 Gm21190A0A0G2JGJ6 266 aa9.7□□□□□ -0.86
Trim40-201ENSMUST00000087158 Cabp4Q8VHC5 271 aa9.7□□□□□ -0.86
Trim40-201ENSMUST00000087158 CastP51125 788 aa9.69□□□□□ -0.86
Trim40-201ENSMUST00000087158 FancaQ9JL70 1439 aa9.68□□□□□ -0.86
Trim40-201ENSMUST00000087158 Rbm25B2RY56 838 aaKnown RBP9.68□□□□□ -0.86
Trim40-201ENSMUST00000087158 AampJ3QN89 436 aa9.68□□□□□ -0.86
Trim40-201ENSMUST00000087158 Ano8Q6PB70 1060 aa9.68□□□□□ -0.86
Trim40-201ENSMUST00000087158 Stk31Q99MW1 1018 aa9.68□□□□□ -0.86
Trim40-201ENSMUST00000087158 Parp14Q2EMV9 1817 aa9.68□□□□□ -0.86
Trim40-201ENSMUST00000087158 Hspa1lP16627 641 aa9.68□□□□□ -0.86
Trim40-201ENSMUST00000087158 Skap1Q3UUV5 355 aa9.68□□□□□ -0.86
Trim40-201ENSMUST00000087158 Polr3glQ8R0C0 218 aa9.68□□□□□ -0.86
Trim40-201ENSMUST00000087158 Ccdc171E9Q1U1 1324 aa9.68□□□□□ -0.86
Trim40-201ENSMUST00000087158 Gnai1B2RSH2 354 aa9.67□□□□□ -0.86
Trim40-201ENSMUST00000087158 MpripP97434 1024 aa9.67□□□□□ -0.86
Trim40-201ENSMUST00000087158 Mcm10Q0VBD2 885 aa9.67□□□□□ -0.86
Trim40-201ENSMUST00000087158 Slc35g1Q8BY79 368 aa9.67□□□□□ -0.86
Trim40-201ENSMUST00000087158 Slain2Q8CI08 581 aa9.67□□□□□ -0.86
Trim40-201ENSMUST00000087158 Gimap6Q8K349 305 aa9.67□□□□□ -0.86
Trim40-201ENSMUST00000087158 Trim26Q99PN3 545 aa9.67□□□□□ -0.86
Trim40-201ENSMUST00000087158 Gnai3Q9DC51 354 aa9.67□□□□□ -0.86
Trim40-201ENSMUST00000087158 Cabp2Q9JLK4 216 aa9.67□□□□□ -0.86
Trim40-201ENSMUST00000087158 Znf521Q6KAS7 1311 aa9.67□□□□□ -0.86
Trim40-201ENSMUST00000087158 Kdm2bQ6P1G2 1309 aa9.67□□□□□ -0.86
Trim40-201ENSMUST00000087158 Zmym3Q9JLM4 1370 aa9.67□□□□□ -0.86
Trim40-201ENSMUST00000087158 Ncoa4Q5U4H9 625 aa9.67□□□□□ -0.86
Trim40-201ENSMUST00000087158 Pank1Q8K4K6 548 aa9.67□□□□□ -0.86
Trim40-201ENSMUST00000087158 Nckap5lQ6GQX2 1323 aa9.66□□□□□ -0.86
Trim40-201ENSMUST00000087158 Ptpn23Q6PB44 1692 aa9.66□□□□□ -0.86
Trim40-201ENSMUST00000087158 Ncapd2Q8K2Z4 1392 aa9.66□□□□□ -0.86
Trim40-201ENSMUST00000087158 Slit2Q9R1B9 1521 aa9.66□□□□□ -0.86
Trim40-201ENSMUST00000087158 PtprvP70289 1705 aa9.66□□□□□ -0.86
Trim40-201ENSMUST00000087158 Gli3Q61602 1583 aa9.66□□□□□ -0.86
Trim40-201ENSMUST00000087158 Col18a1P39061 1774 aa9.65□□□□□ -0.86
Trim40-201ENSMUST00000087158 Fyb1O35601 819 aa9.65□□□□□ -0.86
Trim40-201ENSMUST00000087158 Cdc37l1Q9CZP7 335 aa9.65□□□□□ -0.86
Trim40-201ENSMUST00000087158 TimelessQ9R1X4 1197 aa9.65□□□□□ -0.86
Trim40-201ENSMUST00000087158 Wdr17E9Q271 1322 aa9.65□□□□□ -0.86
Trim40-201ENSMUST00000087158 Wnk3Q80XP9 1757 aa9.65□□□□□ -0.86
Trim40-201ENSMUST00000087158 Hoxc9P09633 260 aa9.65□□□□□ -0.86
Trim40-201ENSMUST00000087158 Ccdc60Q8C4J0 545 aa9.65□□□□□ -0.86
Trim40-201ENSMUST00000087158 Rapgef3Q8VCC8 918 aa9.65□□□□□ -0.86
Trim40-201ENSMUST00000087158 Bcl11bQ99PV8 884 aa9.65□□□□□ -0.86
Trim40-201ENSMUST00000087158 Hsp90aa1P07901 733 aaKnown RBP9.64□□□□□ -0.87
Trim40-201ENSMUST00000087158 Tspyl2Q7TQI8 677 aa9.64□□□□□ -0.87
Trim40-201ENSMUST00000087158 Plin1Q8CGN5 517 aa9.64□□□□□ -0.87
Trim40-201ENSMUST00000087158 Sos1Q62245 1319 aa9.64□□□□□ -0.87
Trim40-201ENSMUST00000087158 Eya1P97767 591 aa9.64□□□□□ -0.87
Trim40-201ENSMUST00000087158 TmpoQ61033 693 aaKnown RBP9.64□□□□□ -0.87
Trim40-201ENSMUST00000087158 Rab11fip3Q8CHD8 1047 aa9.64□□□□□ -0.87
Trim40-201ENSMUST00000087158 G3bp1P97855 465 aaKnown RBP9.63□□□□□ -0.87
Trim40-201ENSMUST00000087158 Ccne1Q61457 408 aa9.63□□□□□ -0.87
Trim40-201ENSMUST00000087158 Kcna6Q61923 529 aa9.63□□□□□ -0.87
Trim40-201ENSMUST00000087158 Ppp6r1Q7TSI3 856 aa9.63□□□□□ -0.87
Trim40-201ENSMUST00000087158 Kcnh5Q920E3 988 aa9.63□□□□□ -0.87
Trim40-201ENSMUST00000087158 Nfat5Q9WV30 1534 aa9.62□□□□□ -0.87
Trim40-201ENSMUST00000087158 Evi5lH3BKQ3 813 aa9.62□□□□□ -0.87
Trim40-201ENSMUST00000087158 Vamp4O70480 141 aa9.62□□□□□ -0.87
Trim40-201ENSMUST00000087158 Gtf3c3Q3TMP1 882 aa9.62□□□□□ -0.87
Trim40-201ENSMUST00000087158 Robo1O89026 1612 aa9.61□□□□□ -0.87
Trim40-201ENSMUST00000087158 TatQ8QZR1 454 aa9.61□□□□□ -0.87
Trim40-201ENSMUST00000087158 Farp2Q91VS8 1065 aa9.61□□□□□ -0.87
Trim40-201ENSMUST00000087158 Usp16Q99LG0 825 aa9.61□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 7.4 ms