RNA–Protein interactions for RNA: ENSMUST00000075084.4

Trim58-201, Transcript of E3 ubiquitin-protein ligase TRIM58, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim58, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58-201ENSMUST00000075084 Ccdc60Q8C4J0 545 aa23.53■■□□□ 1.36
Trim58-201ENSMUST00000075084 Ap3b2Q9JME5 1082 aa23.53■■□□□ 1.36
Trim58-201ENSMUST00000075084 Pik3c2aQ61194 1686 aa23.53■■□□□ 1.36
Trim58-201ENSMUST00000075084 Ccdc171E9Q1U1 1324 aa23.53■■□□□ 1.36
Trim58-201ENSMUST00000075084 Rlbp1Q9Z275 317 aa23.52■■□□□ 1.36
Trim58-201ENSMUST00000075084 CemipQ8BI06 1361 aa23.52■■□□□ 1.36
Trim58-201ENSMUST00000075084 Eif4a2P10630 407 aa23.51■■□□□ 1.35
Trim58-201ENSMUST00000075084 Ppp1r3fQ9JIG4 799 aa23.51■■□□□ 1.35
Trim58-201ENSMUST00000075084 Cdc37l1Q9CZP7 335 aa23.51■■□□□ 1.35
Trim58-201ENSMUST00000075084 Cabp2Q9JLK4 216 aa23.51■■□□□ 1.35
Trim58-201ENSMUST00000075084 Cdk12Q14AX6 1484 aaKnown RBP23.5■■□□□ 1.35
Trim58-201ENSMUST00000075084 Ubr1O70481 1757 aa23.5■■□□□ 1.35
Trim58-201ENSMUST00000075084 Col16a1Q8BLX7 1580 aa23.49■■□□□ 1.35
Trim58-201ENSMUST00000075084 Amigo3Q8C2S7 508 aa23.48■■□□□ 1.35
Trim58-201ENSMUST00000075084 G3bp1P97855 465 aaKnown RBP23.48■■□□□ 1.35
Trim58-201ENSMUST00000075084 Tmem2Q5FWI3 1383 aa23.47■■□□□ 1.35
Trim58-201ENSMUST00000075084 Gnai1B2RSH2 354 aa23.46■■□□□ 1.35
Trim58-201ENSMUST00000075084 MpripP97434 1024 aa23.46■■□□□ 1.35
Trim58-201ENSMUST00000075084 Gnai3Q9DC51 354 aa23.46■■□□□ 1.35
Trim58-201ENSMUST00000075084 Map2P20357 1828 aa23.45■■□□□ 1.35
Trim58-201ENSMUST00000075084 Gli3Q61602 1583 aa23.45■■□□□ 1.34
Trim58-201ENSMUST00000075084 Plin1Q8CGN5 517 aa23.45■■□□□ 1.34
Trim58-201ENSMUST00000075084 Gm6268A2A3U9 297 aa23.44■■□□□ 1.34
Trim58-201ENSMUST00000075084 Stk31Q99MW1 1018 aa23.44■■□□□ 1.34
Trim58-201ENSMUST00000075084 Scn7aB1AYL1 1681 aa23.43■■□□□ 1.34
Trim58-201ENSMUST00000075084 Rangap1P46061 589 aaKnown RBP23.43■■□□□ 1.34
Trim58-201ENSMUST00000075084 Iqcf3Q9D498 203 aa23.43■■□□□ 1.34
Trim58-201ENSMUST00000075084 Dennd6aQ8BH65 605 aa23.42■■□□□ 1.34
Trim58-201ENSMUST00000075084 Vamp4O70480 141 aa23.42■■□□□ 1.34
Trim58-201ENSMUST00000075084 Maco1Q7TQE6 664 aaKnown RBP23.41■■□□□ 1.34
Trim58-201ENSMUST00000075084 Armcx1Q9CX83 456 aa23.41■■□□□ 1.34
Trim58-201ENSMUST00000075084 Camta1A2A891 1682 aa23.41■■□□□ 1.34
Trim58-201ENSMUST00000075084 Znf330Q922H9 316 aa23.41■■□□□ 1.34
Trim58-201ENSMUST00000075084 Atf3Q60765 181 aa23.4■■□□□ 1.34
Trim58-201ENSMUST00000075084 Frmpd2A0A140LI67 1392 aa23.4■■□□□ 1.34
Trim58-201ENSMUST00000075084 Plekhm2Q80TQ5 1018 aa23.4■■□□□ 1.34
Trim58-201ENSMUST00000075084 Nlgn1Q99K10 843 aa23.4■■□□□ 1.34
Trim58-201ENSMUST00000075084 Nsd3Q6P2L6 1439 aa23.39■■□□□ 1.34
Trim58-201ENSMUST00000075084 FancaQ9JL70 1439 aa23.39■■□□□ 1.34
Trim58-201ENSMUST00000075084 Slc35g1Q8BY79 368 aa23.39■■□□□ 1.33
Trim58-201ENSMUST00000075084 Parp14Q2EMV9 1817 aa23.38■■□□□ 1.33
Trim58-201ENSMUST00000075084 Nectin2P32507 530 aa23.37■■□□□ 1.33
Trim58-201ENSMUST00000075084 Usp16Q99LG0 825 aa23.37■■□□□ 1.33
Trim58-201ENSMUST00000075084 Senp3Q9EP97 568 aaKnown RBP23.37■■□□□ 1.33
Trim58-201ENSMUST00000075084 Gm21190A0A0G2JGJ6 266 aa23.37■■□□□ 1.33
Trim58-201ENSMUST00000075084 Tmco5bQ80X59 307 aa23.37■■□□□ 1.33
Trim58-201ENSMUST00000075084 Cabp4Q8VHC5 271 aa23.37■■□□□ 1.33
Trim58-201ENSMUST00000075084 Kcna6Q61923 529 aa23.35■■□□□ 1.33
Trim58-201ENSMUST00000075084 Sos1Q62245 1319 aa23.35■■□□□ 1.33
Trim58-201ENSMUST00000075084 Nckap5lQ6GQX2 1323 aa23.35■■□□□ 1.33
Trim58-201ENSMUST00000075084 Wnk3Q80XP9 1757 aa23.34■■□□□ 1.33
Trim58-201ENSMUST00000075084 U2surpQ6NV83 1029 aaKnown RBP23.34■■□□□ 1.33
Trim58-201ENSMUST00000075084 Farp2Q91VS8 1065 aa23.34■■□□□ 1.33
Trim58-201ENSMUST00000075084 Q3UPC7 1272 aa23.34■■□□□ 1.33
Trim58-201ENSMUST00000075084 Nutm1Q8BHP2 1126 aa23.34■■□□□ 1.33
Trim58-201ENSMUST00000075084 PtprvP70289 1705 aa23.33■■□□□ 1.33
Trim58-201ENSMUST00000075084 ChgaP26339 463 aaKnown RBP23.33■■□□□ 1.33
Trim58-201ENSMUST00000075084 Brinp3Q499E0 766 aa23.33■■□□□ 1.33
Trim58-201ENSMUST00000075084 Aldh1l1Q8R0Y6 902 aa23.33■■□□□ 1.33
Trim58-201ENSMUST00000075084 Klhdc4Q921I2 584 aa23.33■■□□□ 1.33
Trim58-201ENSMUST00000075084 KarsQ99MN1 595 aaKnown RBP23.33■■□□□ 1.33
Trim58-201ENSMUST00000075084 Wdr17E9Q271 1322 aa23.33■■□□□ 1.33
Trim58-201ENSMUST00000075084 Slit2Q9R1B9 1521 aa23.32■■□□□ 1.32
Trim58-201ENSMUST00000075084 Zfp777B9EKF4 885 aa23.32■■□□□ 1.32
Trim58-201ENSMUST00000075084 Trim30dE9PWL0 497 aa23.32■■□□□ 1.32
Trim58-201ENSMUST00000075084 GnpatP98192 678 aa23.32■■□□□ 1.32
Trim58-201ENSMUST00000075084 Atl3Q91YH5 541 aa23.32■■□□□ 1.32
Trim58-201ENSMUST00000075084 Cluap1Q8R3P7 413 aa23.31■■□□□ 1.32
Trim58-201ENSMUST00000075084 4930567H17RikQ3V0K5 233 aa23.31■■□□□ 1.32
Trim58-201ENSMUST00000075084 TmpoQ61033 693 aaKnown RBP23.31■■□□□ 1.32
Trim58-201ENSMUST00000075084 Fyb1O35601 819 aa23.3■■□□□ 1.32
Trim58-201ENSMUST00000075084 Ptpn23Q6PB44 1692 aa23.29■■□□□ 1.32
Trim58-201ENSMUST00000075084 Eya1P97767 591 aa23.28■■□□□ 1.32
Trim58-201ENSMUST00000075084 Ppp2r3aB2RXC8 1150 aa23.28■■□□□ 1.32
Trim58-201ENSMUST00000075084 AU019823E9PUQ3 292 aa23.28■■□□□ 1.32
Trim58-201ENSMUST00000075084 Hs1bp3Q3TC93 395 aa23.28■■□□□ 1.32
Trim58-201ENSMUST00000075084 Cavin2Q63918 418 aaKnown RBP23.28■■□□□ 1.32
Trim58-201ENSMUST00000075084 Ccdc183A2AJB1 534 aa23.27■■□□□ 1.32
Trim58-201ENSMUST00000075084 Ak7Q9D2H2 614 aa23.27■■□□□ 1.32
Trim58-201ENSMUST00000075084 Nkx1-2P42580 305 aa23.27■■□□□ 1.32
Trim58-201ENSMUST00000075084 MvpQ9EQK5 861 aa23.27■■□□□ 1.32
Trim58-201ENSMUST00000075084 Ddx17Q501J6 650 aaKnown RBP23.26■■□□□ 1.31
Trim58-201ENSMUST00000075084 Rad17Q6NXW6 688 aa23.26■■□□□ 1.31
Trim58-201ENSMUST00000075084 Ipo8Q7TMY7 1010 aa23.26■■□□□ 1.31
Trim58-201ENSMUST00000075084 Tet3Q8BG87 1668 aa23.26■■□□□ 1.31
Trim58-201ENSMUST00000075084 Hoxc9P09633 260 aa23.25■■□□□ 1.31
Trim58-201ENSMUST00000075084 Ccne1Q61457 408 aa23.25■■□□□ 1.31
Trim58-201ENSMUST00000075084 TimelessQ9R1X4 1197 aa23.24■■□□□ 1.31
Trim58-201ENSMUST00000075084 Ankrd44B2RXR6 993 aa23.23■■□□□ 1.31
Trim58-201ENSMUST00000075084 MarsQ68FL6 902 aaKnown RBP23.23■■□□□ 1.31
Trim58-201ENSMUST00000075084 Trpm3Q5F4S9 1721 aa23.22■■□□□ 1.31
Trim58-201ENSMUST00000075084 CanxP35564 591 aaKnown RBP23.22■■□□□ 1.31
Trim58-201ENSMUST00000075084 Ano8Q6PB70 1060 aa23.22■■□□□ 1.31
Trim58-201ENSMUST00000075084 Adgrb1Q3UHD1 1582 aa23.21■■□□□ 1.31
Trim58-201ENSMUST00000075084 Scaf1Q5U4C3 1256 aaKnown RBP23.21■■□□□ 1.31
Trim58-201ENSMUST00000075084 Pnmal2G3X9N3 661 aa23.2■■□□□ 1.3
Trim58-201ENSMUST00000075084 Gimap6Q8K349 305 aa23.2■■□□□ 1.3
Trim58-201ENSMUST00000075084 Rtf1A2AQ19 715 aaKnown RBP23.2■■□□□ 1.3
Trim58-201ENSMUST00000075084 Ggnbp2Q5SV77 696 aa23.2■■□□□ 1.3
Trim58-201ENSMUST00000075084 Ncoa4Q5U4H9 625 aa23.2■■□□□ 1.3
Retrieved 100 of 22,080 RNA–protein pairs in 48.7 ms