RNA–Protein interactions for RNA: ENSMUST00000022328.13

Ldb3-202, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 2,468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-202ENSMUST00000022328 Ipo8Q7TMY7 1010 aa13.93□□□□□ -0.18
Ldb3-202ENSMUST00000022328 Ccdc60Q8C4J0 545 aa13.93□□□□□ -0.18
Ldb3-202ENSMUST00000022328 Sirt1Q923E4 737 aa13.93□□□□□ -0.18
Ldb3-202ENSMUST00000022328 Ppp1r3fQ9JIG4 799 aa13.93□□□□□ -0.18
Ldb3-202ENSMUST00000022328 Uhrf1bp1lA2RSJ4 1457 aa13.92□□□□□ -0.18
Ldb3-202ENSMUST00000022328 Trim30dE9PWL0 497 aa13.92□□□□□ -0.18
Ldb3-202ENSMUST00000022328 Dnajc5gQ8C632 165 aa13.92□□□□□ -0.18
Ldb3-202ENSMUST00000022328 Atl3Q91YH5 541 aa13.92□□□□□ -0.18
Ldb3-202ENSMUST00000022328 Ak7Q9D2H2 614 aa13.92□□□□□ -0.18
Ldb3-202ENSMUST00000022328 PzpQ61838 1495 aa13.92□□□□□ -0.18
Ldb3-202ENSMUST00000022328 Ccdc183A2AJB1 534 aa13.92□□□□□ -0.18
Ldb3-202ENSMUST00000022328 AU015836B2RUM3 263 aa13.91□□□□□ -0.18
Ldb3-202ENSMUST00000022328 Taok2Q6ZQ29 1240 aa13.91□□□□□ -0.18
Ldb3-202ENSMUST00000022328 Rsph6aQ8CDR2 708 aa13.91□□□□□ -0.18
Ldb3-202ENSMUST00000022328 Spef2Q8C9J3 1734 aa13.91□□□□□ -0.18
Ldb3-202ENSMUST00000022328 G3bp1P97855 465 aaKnown RBP13.9□□□□□ -0.18
Ldb3-202ENSMUST00000022328 Hs1bp3Q3TC93 395 aa13.9□□□□□ -0.18
Ldb3-202ENSMUST00000022328 HnrnpmQ9D0E1 729 aaKnown RBP13.9□□□□□ -0.18
Ldb3-202ENSMUST00000022328 Ppp2r3aB2RXC8 1150 aa13.9□□□□□ -0.18
Ldb3-202ENSMUST00000022328 Tnrc6bQ8BKI2 1810 aaKnown RBP13.9□□□□□ -0.18
Ldb3-202ENSMUST00000022328 Arap3Q8R5G7 1538 aa13.89□□□□□ -0.19
Ldb3-202ENSMUST00000022328 4930567H17RikQ3V0K5 233 aa13.89□□□□□ -0.19
Ldb3-202ENSMUST00000022328 Cdc37l1Q9CZP7 335 aa13.89□□□□□ -0.19
Ldb3-202ENSMUST00000022328 Maco1Q7TQE6 664 aaKnown RBP13.88□□□□□ -0.19
Ldb3-202ENSMUST00000022328 Armcx1Q9CX83 456 aa13.88□□□□□ -0.19
Ldb3-202ENSMUST00000022328 Znf335A2A5K6 1337 aa13.88□□□□□ -0.19
Ldb3-202ENSMUST00000022328 Astn2Q80Z10 1352 aa13.88□□□□□ -0.19
Ldb3-202ENSMUST00000022328 Gnai1B2RSH2 354 aa13.87□□□□□ -0.19
Ldb3-202ENSMUST00000022328 Gnai3Q9DC51 354 aa13.87□□□□□ -0.19
Ldb3-202ENSMUST00000022328 Mdc1Q5PSV9 1707 aa13.86□□□□□ -0.19
Ldb3-202ENSMUST00000022328 Vamp4O70480 141 aa13.86□□□□□ -0.19
Ldb3-202ENSMUST00000022328 Plekhm2Q80TQ5 1018 aa13.86□□□□□ -0.19
Ldb3-202ENSMUST00000022328 Rrp9Q91WM3 475 aaKnown RBP13.86□□□□□ -0.19
Ldb3-202ENSMUST00000022328 Chd4Q6PDQ2 1915 aaKnown RBP13.85□□□□□ -0.19
Ldb3-202ENSMUST00000022328 Hsp90ab1P11499 724 aaKnown RBP13.85□□□□□ -0.19
Ldb3-202ENSMUST00000022328 Q3UJC8 639 aa13.85□□□□□ -0.19
Ldb3-202ENSMUST00000022328 G430095P16RikE9Q913 147 aa13.85□□□□□ -0.19
Ldb3-202ENSMUST00000022328 Safb2Q80YR5 991 aaKnown RBP13.85□□□□□ -0.19
Ldb3-202ENSMUST00000022328 Aldh1l1Q8R0Y6 902 aa13.85□□□□□ -0.19
Ldb3-202ENSMUST00000022328 N4bp2F8VQG7 1678 aaKnown RBP13.85□□□□□ -0.19
Ldb3-202ENSMUST00000022328 Med1Q925J9 1575 aa13.85□□□□□ -0.19
Ldb3-202ENSMUST00000022328 Nsd3Q6P2L6 1439 aa13.84□□□□□ -0.19
Ldb3-202ENSMUST00000022328 Gm6268A2A3U9 297 aa13.84□□□□□ -0.19
Ldb3-202ENSMUST00000022328 Q3UPC7 1272 aa13.84□□□□□ -0.19
Ldb3-202ENSMUST00000022328 Cluap1Q8R3P7 413 aa13.84□□□□□ -0.19
Ldb3-202ENSMUST00000022328 Znf330Q922H9 316 aa13.84□□□□□ -0.19
Ldb3-202ENSMUST00000022328 Eif2s2Q99L45 331 aaKnown RBP13.84□□□□□ -0.19
Ldb3-202ENSMUST00000022328 KarsQ99MN1 595 aaKnown RBP13.84□□□□□ -0.19
Ldb3-202ENSMUST00000022328 Cabp2Q9JLK4 216 aa13.84□□□□□ -0.19
Ldb3-202ENSMUST00000022328 Phlpp2Q8BXA7 1320 aa13.84□□□□□ -0.19
Ldb3-202ENSMUST00000022328 CemipQ8BI06 1361 aa13.83□□□□□ -0.19
Ldb3-202ENSMUST00000022328 Rreb1Q3UH06 1700 aaKnown RBP13.83□□□□□ -0.19
Ldb3-202ENSMUST00000022328 AU019823E9PUQ3 292 aa13.83□□□□□ -0.2
Ldb3-202ENSMUST00000022328 Mcm10Q0VBD2 885 aa13.83□□□□□ -0.2
Ldb3-202ENSMUST00000022328 Sos1Q62245 1319 aa13.83□□□□□ -0.2
Ldb3-202ENSMUST00000022328 Eif4a2P10630 407 aa13.83□□□□□ -0.2
Ldb3-202ENSMUST00000022328 Ppp1r9bQ6R891 817 aaKnown RBP13.83□□□□□ -0.2
Ldb3-202ENSMUST00000022328 Cavin2Q63918 418 aaKnown RBP13.82□□□□□ -0.2
Ldb3-202ENSMUST00000022328 Tmco5bQ80X59 307 aa13.81□□□□□ -0.2
Ldb3-202ENSMUST00000022328 NalcnQ8BXR5 1738 aa13.81□□□□□ -0.2
Ldb3-202ENSMUST00000022328 Nectin2P32507 530 aa13.81□□□□□ -0.2
Ldb3-202ENSMUST00000022328 MvpQ9EQK5 861 aa13.81□□□□□ -0.2
Ldb3-202ENSMUST00000022328 Rims2Q9EQZ7 1530 aa13.8□□□□□ -0.2
Ldb3-202ENSMUST00000022328 Pnmal2G3X9N3 661 aa13.8□□□□□ -0.2
Ldb3-202ENSMUST00000022328 Usp16Q99LG0 825 aa13.8□□□□□ -0.2
Ldb3-202ENSMUST00000022328 Stk31Q99MW1 1018 aa13.8□□□□□ -0.2
Ldb3-202ENSMUST00000022328 Cdk12Q14AX6 1484 aaKnown RBP13.8□□□□□ -0.2
Ldb3-202ENSMUST00000022328 Rangap1P46061 589 aaKnown RBP13.8□□□□□ -0.2
Ldb3-202ENSMUST00000022328 Tbc1d32Q3URV1 1296 aa13.8□□□□□ -0.2
Ldb3-202ENSMUST00000022328 Nutm1Q8BHP2 1126 aa13.8□□□□□ -0.2
Ldb3-202ENSMUST00000022328 Chmp4bQ9D8B3 224 aaKnown RBP13.8□□□□□ -0.2
Ldb3-202ENSMUST00000022328 Lmtk3Q5XJV6 1424 aa13.79□□□□□ -0.2
Ldb3-202ENSMUST00000022328 Map7O88735 730 aa13.79□□□□□ -0.2
Ldb3-202ENSMUST00000022328 SkilQ60665 675 aa13.79□□□□□ -0.2
Ldb3-202ENSMUST00000022328 Ankrd44B2RXR6 993 aa13.79□□□□□ -0.2
Ldb3-202ENSMUST00000022328 DmtnQ9WV69 405 aa13.78□□□□□ -0.2
Ldb3-202ENSMUST00000022328 Abcc10Q8R4P9 1501 aa13.78□□□□□ -0.2
Ldb3-202ENSMUST00000022328 D430041D05RikF6ZGR6 1678 aa13.78□□□□□ -0.2
Ldb3-202ENSMUST00000022328 MpripP97434 1024 aa13.78□□□□□ -0.2
Ldb3-202ENSMUST00000022328 MarsQ68FL6 902 aaKnown RBP13.78□□□□□ -0.2
Ldb3-202ENSMUST00000022328 Phf14Q9D4H9 881 aa13.78□□□□□ -0.2
Ldb3-202ENSMUST00000022328 Wwc1Q5SXA9 1104 aa13.77□□□□□ -0.21
Ldb3-202ENSMUST00000022328 Htatsf1Q8BGC0 757 aa13.77□□□□□ -0.21
Ldb3-202ENSMUST00000022328 Mon2Q80TL7 1715 aa13.77□□□□□ -0.21
Ldb3-202ENSMUST00000022328 Zfp777B9EKF4 885 aa13.76□□□□□ -0.21
Ldb3-202ENSMUST00000022328 Pik3c2aQ61194 1686 aa13.76□□□□□ -0.21
Ldb3-202ENSMUST00000022328 Col16a1Q8BLX7 1580 aa13.76□□□□□ -0.21
Ldb3-202ENSMUST00000022328 4933402E13RikQ9D4D2 429 aa13.76□□□□□ -0.21
Ldb3-202ENSMUST00000022328 Brd1E9PZ26 1189 aaKnown RBP13.75□□□□□ -0.21
Ldb3-202ENSMUST00000022328 Kif20aP97329 887 aa13.75□□□□□ -0.21
Ldb3-202ENSMUST00000022328 Znf692Q3U381 531 aa13.75□□□□□ -0.21
Ldb3-202ENSMUST00000022328 Kif18aQ91WD7 886 aa13.75□□□□□ -0.21
Ldb3-202ENSMUST00000022328 Ubr1O70481 1757 aa13.75□□□□□ -0.21
Ldb3-202ENSMUST00000022328 C5P06684 1680 aa13.75□□□□□ -0.21
Ldb3-202ENSMUST00000022328 U2surpQ6NV83 1029 aaKnown RBP13.75□□□□□ -0.21
Ldb3-202ENSMUST00000022328 Plin1Q8CGN5 517 aa13.75□□□□□ -0.21
Ldb3-202ENSMUST00000022328 NgefQ8CHT1 710 aa13.75□□□□□ -0.21
Ldb3-202ENSMUST00000022328 Als2Q920R0 1651 aa13.75□□□□□ -0.21
Ldb3-202ENSMUST00000022328 Sptbn5F6UCX4 1208 aa13.74□□□□□ -0.21
Ldb3-202ENSMUST00000022328 Rabep1O35551 862 aa13.74□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 34.3 ms