RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Slx1bQ8BX32 270 aa19.54■□□□□ 0.72
Ercc1-201ENSMUST00000003645 Slit2Q9R1B9 1521 aa19.53■□□□□ 0.72
Ercc1-201ENSMUST00000003645 Golga2Q921M4 999 aa19.53■□□□□ 0.72
Ercc1-201ENSMUST00000003645 Eya1P97767 591 aa19.52■□□□□ 0.72
Ercc1-201ENSMUST00000003645 Stra8P70278 393 aa19.51■□□□□ 0.71
Ercc1-201ENSMUST00000003645 Ddx54Q8K4L0 874 aaKnown RBP19.5■□□□□ 0.71
Ercc1-201ENSMUST00000003645 Pard3Q99NH2 1333 aa19.5■□□□□ 0.71
Ercc1-201ENSMUST00000003645 Znf541Q0GGX2 1363 aa19.49■□□□□ 0.71
Ercc1-201ENSMUST00000003645 Usp19Q3UJD6 1360 aa19.49■□□□□ 0.71
Ercc1-201ENSMUST00000003645 MpripP97434 1024 aa19.49■□□□□ 0.71
Ercc1-201ENSMUST00000003645 Uspl1Q3ULM6 1089 aa19.49■□□□□ 0.71
Ercc1-201ENSMUST00000003645 Tcerg1Q8CGF7 1100 aaKnown RBP19.48■□□□□ 0.71
Ercc1-201ENSMUST00000003645 OptnQ8K3K8 584 aa19.48■□□□□ 0.71
Ercc1-201ENSMUST00000003645 CrklP47941 303 aa19.47■□□□□ 0.71
Ercc1-201ENSMUST00000003645 Q4VA45 678 aa19.47■□□□□ 0.71
Ercc1-201ENSMUST00000003645 Spef2Q8C9J3 1734 aa19.47■□□□□ 0.71
Ercc1-201ENSMUST00000003645 Parp14Q2EMV9 1817 aa19.47■□□□□ 0.71
Ercc1-201ENSMUST00000003645 Kdm6aO70546 1401 aa19.46■□□□□ 0.71
Ercc1-201ENSMUST00000003645 Rtl5Q5DTT4 599 aa19.46■□□□□ 0.71
Ercc1-201ENSMUST00000003645 RgmbQ7TQ33 436 aa19.46■□□□□ 0.71
Ercc1-201ENSMUST00000003645 Col15a1O35206 1367 aa19.46■□□□□ 0.71
Ercc1-201ENSMUST00000003645 Apaf1O88879 1249 aa19.45■□□□□ 0.7
Ercc1-201ENSMUST00000003645 Slit1Q80TR4 1531 aa19.45■□□□□ 0.7
Ercc1-201ENSMUST00000003645 Nyap1Q6PFX7 833 aa19.44■□□□□ 0.7
Ercc1-201ENSMUST00000003645 Ncbp3Q8BZR9 615 aaKnown RBP19.44■□□□□ 0.7
Ercc1-201ENSMUST00000003645 TkfcQ8VC30 578 aa19.44■□□□□ 0.7
Ercc1-201ENSMUST00000003645 Sema6bO54951 886 aa19.44■□□□□ 0.7
Ercc1-201ENSMUST00000003645 Mcm10Q0VBD2 885 aa19.44■□□□□ 0.7
Ercc1-201ENSMUST00000003645 TnikP83510 1323 aa19.43■□□□□ 0.7
Ercc1-201ENSMUST00000003645 Cntnap1O54991 1385 aa19.42■□□□□ 0.7
Ercc1-201ENSMUST00000003645 Ggt6Q6PDE7 497 aa19.42■□□□□ 0.7
Ercc1-201ENSMUST00000003645 Ppp1r37Q8BKR5 712 aa19.42■□□□□ 0.7
Ercc1-201ENSMUST00000003645 Ecm2Q5FW85 670 aa19.41■□□□□ 0.7
Ercc1-201ENSMUST00000003645 Stk31Q99MW1 1018 aa19.4■□□□□ 0.7
Ercc1-201ENSMUST00000003645 Mapk8ip3Q9ESN9 1337 aa19.4■□□□□ 0.7
Ercc1-201ENSMUST00000003645 Simc1E9Q6E9 1354 aa19.4■□□□□ 0.7
Ercc1-201ENSMUST00000003645 Nhsl1Q8CAF4 1587 aa19.4■□□□□ 0.7
Ercc1-201ENSMUST00000003645 Plekhd1B2RPU2 505 aa19.39■□□□□ 0.69
Ercc1-201ENSMUST00000003645 Emilin2Q8K482 1074 aa19.39■□□□□ 0.69
Ercc1-201ENSMUST00000003645 Ciz1Q8VEH2 845 aa19.39■□□□□ 0.69
Ercc1-201ENSMUST00000003645 FocadA2AKG8 1798 aa19.38■□□□□ 0.69
Ercc1-201ENSMUST00000003645 Cavin4A2AMM0 362 aa19.38■□□□□ 0.69
Ercc1-201ENSMUST00000003645 CrbnQ8C7D2 445 aa19.38■□□□□ 0.69
Ercc1-201ENSMUST00000003645 Rab11fip3Q8CHD8 1047 aa19.38■□□□□ 0.69
Ercc1-201ENSMUST00000003645 Gsdma3Q5Y4Y6 464 aa19.37■□□□□ 0.69
Ercc1-201ENSMUST00000003645 Fnbp4Q6ZQ03 1031 aa19.37■□□□□ 0.69
Ercc1-201ENSMUST00000003645 MypopQ8R4U1 393 aa19.37■□□□□ 0.69
Ercc1-201ENSMUST00000003645 Iqcf3Q9D498 203 aa19.37■□□□□ 0.69
Ercc1-201ENSMUST00000003645 Uhrf1bp1B2KF50 1429 aa19.36■□□□□ 0.69
Ercc1-201ENSMUST00000003645 Cypt2Q6P924 180 aa19.36■□□□□ 0.69
Ercc1-201ENSMUST00000003645 Plin1Q8CGN5 517 aa19.36■□□□□ 0.69
Ercc1-201ENSMUST00000003645 HypkQ9CR41 129 aa19.36■□□□□ 0.69
Ercc1-201ENSMUST00000003645 Zeb2Q9R0G7 1215 aa19.36■□□□□ 0.69
Ercc1-201ENSMUST00000003645 Lrp6O88572 1613 aa19.36■□□□□ 0.69
Ercc1-201ENSMUST00000003645 Cabp2Q9JLK4 216 aa19.35■□□□□ 0.69
Ercc1-201ENSMUST00000003645 Gm10471E9Q1C7 252 aa19.34■□□□□ 0.69
Ercc1-201ENSMUST00000003645 Dusp27Q148W8 1138 aa19.34■□□□□ 0.69
Ercc1-201ENSMUST00000003645 Zfp444Q3TDV8 331 aaKnown RBP19.34■□□□□ 0.69
Ercc1-201ENSMUST00000003645 Zranb3Q6NZP1 1069 aa19.34■□□□□ 0.69
Ercc1-201ENSMUST00000003645 Ofd1Q80Z25 1017 aa19.34■□□□□ 0.69
Ercc1-201ENSMUST00000003645 Shank2Q80Z38 1476 aa19.34■□□□□ 0.69
Ercc1-201ENSMUST00000003645 TmpoQ61033 693 aaKnown RBP19.33■□□□□ 0.69
Ercc1-201ENSMUST00000003645 Speer4f1Q9D5Q6 258 aa19.33■□□□□ 0.69
Ercc1-201ENSMUST00000003645 Ralbp1Q62172 648 aa19.32■□□□□ 0.68
Ercc1-201ENSMUST00000003645 Zpr1Q62384 459 aa19.32■□□□□ 0.68
Ercc1-201ENSMUST00000003645 Amotl1Q9D4H4 968 aa19.32■□□□□ 0.68
Ercc1-201ENSMUST00000003645 Swt1Q9DBQ9 907 aa19.32■□□□□ 0.68
Ercc1-201ENSMUST00000003645 Pak3Q61036 559 aa19.32■□□□□ 0.68
Ercc1-201ENSMUST00000003645 Trpm3Q5F4S9 1721 aa19.31■□□□□ 0.68
Ercc1-201ENSMUST00000003645 Rad21Q61550 635 aaKnown RBP19.31■□□□□ 0.68
Ercc1-201ENSMUST00000003645 ThemisQ8BGW0 636 aa19.31■□□□□ 0.68
Ercc1-201ENSMUST00000003645 Larp1bA0A0A6YXJ7 370 aaKnown RBP19.3■□□□□ 0.68
Ercc1-201ENSMUST00000003645 InhbeO08717 350 aa19.3■□□□□ 0.68
Ercc1-201ENSMUST00000003645 Znf710Q3U288 666 aa19.3■□□□□ 0.68
Ercc1-201ENSMUST00000003645 Psrc1Q9D0P7 329 aa19.3■□□□□ 0.68
Ercc1-201ENSMUST00000003645 Ccdc129Q14B48 1034 aa19.29■□□□□ 0.68
Ercc1-201ENSMUST00000003645 Nup153E9Q3G8 1462 aaKnown RBP19.29■□□□□ 0.68
Ercc1-201ENSMUST00000003645 Aplp2Q06335 707 aa19.28■□□□□ 0.68
Ercc1-201ENSMUST00000003645 Cc2d1aQ8K1A6 943 aa19.28■□□□□ 0.68
Ercc1-201ENSMUST00000003645 Ahnak2E9PYB0 1738 aaKnown RBP19.27■□□□□ 0.68
Ercc1-201ENSMUST00000003645 Arfgef2A2A5R2 1792 aa19.26■□□□□ 0.67
Ercc1-201ENSMUST00000003645 Adgrb1Q3UHD1 1582 aa19.26■□□□□ 0.67
Ercc1-201ENSMUST00000003645 Neurod2Q62414 383 aa19.26■□□□□ 0.67
Ercc1-201ENSMUST00000003645 Eno4Q8C042 619 aa19.26■□□□□ 0.67
Ercc1-201ENSMUST00000003645 Pm20d1Q8C165 503 aa19.26■□□□□ 0.67
Ercc1-201ENSMUST00000003645 4930572O03RikQ8C5Y0 211 aa19.26■□□□□ 0.67
Ercc1-201ENSMUST00000003645 Ccdc30Q8BVF4 654 aa19.25■□□□□ 0.67
Ercc1-201ENSMUST00000003645 Atxn3Q9CVD2 355 aa19.24■□□□□ 0.67
Ercc1-201ENSMUST00000003645 Tns2Q8CGB6 1400 aa19.24■□□□□ 0.67
Ercc1-201ENSMUST00000003645 Aox2Q5SGK3 1345 aa19.24■□□□□ 0.67
Ercc1-201ENSMUST00000003645 Fam50bQ9WTJ8 334 aa19.23■□□□□ 0.67
Ercc1-201ENSMUST00000003645 Anks4bQ8K3X6 423 aa19.22■□□□□ 0.67
Ercc1-201ENSMUST00000003645 Tnks1bp1P58871 1720 aa19.22■□□□□ 0.67
Ercc1-201ENSMUST00000003645 Sf3b2Q3UJB0 878 aaKnown RBP19.21■□□□□ 0.67
Ercc1-201ENSMUST00000003645 Kcnh4A2A5F7 1018 aa19.2■□□□□ 0.66
Ercc1-201ENSMUST00000003645 Rtf1A2AQ19 715 aaKnown RBP19.2■□□□□ 0.66
Ercc1-201ENSMUST00000003645 Snap23O09044 210 aa19.2■□□□□ 0.66
Ercc1-201ENSMUST00000003645 Fer1l6E0CZ42 1862 aa19.2■□□□□ 0.66
Ercc1-201ENSMUST00000003645 Vps33bP59016 617 aa19.19■□□□□ 0.66
Ercc1-201ENSMUST00000003645 Mst1rQ62190 1378 aa19.19■□□□□ 0.66
Retrieved 100 of 22,080 RNA–protein pairs in 27.3 ms