RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 STPG1Q5TH74 334 aa18.28■□□□□ 0.52
SNRPA1-201ENST00000254193 AGBL4Q5VU57 503 aa18.28■□□□□ 0.52
SNRPA1-201ENST00000254193 KIAA0895LQ68EN5 471 aa18.28■□□□□ 0.52
SNRPA1-201ENST00000254193 TP53INP2Q8IXH6 220 aa18.28■□□□□ 0.52
SNRPA1-201ENST00000254193 RFFLQ8WZ73 363 aa18.28■□□□□ 0.52
SNRPA1-201ENST00000254193 FAM131CQ96AQ9 280 aa18.28■□□□□ 0.52
SNRPA1-201ENST00000254193 ARRDC3Q96B67 414 aa18.28■□□□□ 0.52
SNRPA1-201ENST00000254193 PANX2Q96RD6 677 aa18.28■□□□□ 0.52
SNRPA1-201ENST00000254193 ZDHHC6Q9H6R6 413 aa18.28■□□□□ 0.52
SNRPA1-201ENST00000254193 CAPN10Q9HC96 672 aa18.28■□□□□ 0.52
SNRPA1-201ENST00000254193 KLHL11Q9NVR0 708 aa18.28■□□□□ 0.52
SNRPA1-201ENST00000254193 DLL3Q9NYJ7 618 aa18.28■□□□□ 0.52
SNRPA1-201ENST00000254193 SUSD2Q9UGT4 822 aa18.28■□□□□ 0.52
SNRPA1-201ENST00000254193 TBC1D3DA0A087WVF3 549 aa18.27■□□□□ 0.52
SNRPA1-201ENST00000254193 TBC1D3IA0A087WXS9 549 aa18.27■□□□□ 0.52
SNRPA1-201ENST00000254193 TBC1D3EA0A087X179 549 aa18.27■□□□□ 0.52
SNRPA1-201ENST00000254193 TBC1D3KA0A087X1G2 549 aa18.27■□□□□ 0.52
SNRPA1-201ENST00000254193 TBC1D3FA6NER0 549 aaPredicted RBP18.27■□□□□ 0.52
SNRPA1-201ENST00000254193 ARHGAP42A6NI28 874 aa18.27■□□□□ 0.52
SNRPA1-201ENST00000254193 TBC1D3LB9A6J9 549 aa18.27■□□□□ 0.52
SNRPA1-201ENST00000254193 PRAMEF11O60813 436 aa18.27■□□□□ 0.52
SNRPA1-201ENST00000254193 CD48P09326 243 aa18.27■□□□□ 0.52
SNRPA1-201ENST00000254193 TBC1D3HP0C7X1 549 aa18.27■□□□□ 0.52
SNRPA1-201ENST00000254193 ENGP17813 658 aa18.27■□□□□ 0.52
SNRPA1-201ENST00000254193 IL4RP24394 825 aa18.27■□□□□ 0.52
SNRPA1-201ENST00000254193 MAGEA1P43355 309 aa18.27■□□□□ 0.52
SNRPA1-201ENST00000254193 MAPK8P45983 427 aa18.27■□□□□ 0.52
SNRPA1-201ENST00000254193 MMRN1Q13201 1228 aa18.27■□□□□ 0.52
SNRPA1-201ENST00000254193 CYTH1Q15438 398 aa18.27■□□□□ 0.52
SNRPA1-201ENST00000254193 INO80DQ53TQ3 878 aaPredicted RBP18.27■□□□□ 0.52
SNRPA1-201ENST00000254193 TBC1D3GQ6DHY5 549 aa18.27■□□□□ 0.52
SNRPA1-201ENST00000254193 TBC1D3CQ6IPX1 549 aa18.27■□□□□ 0.52
SNRPA1-201ENST00000254193 ARHGAP36Q6ZRI8 547 aa18.27■□□□□ 0.52
SNRPA1-201ENST00000254193 RABEPKQ7Z6M1 372 aa18.27■□□□□ 0.52
SNRPA1-201ENST00000254193 TBC1D3Q8IZP1 549 aaPredicted RBP18.27■□□□□ 0.52
SNRPA1-201ENST00000254193 OR2AP1Q8NGE2 309 aa18.27■□□□□ 0.52
SNRPA1-201ENST00000254193 C1orf216Q8TAB5 229 aa18.27■□□□□ 0.52
SNRPA1-201ENST00000254193 TSC1Q92574 1164 aa18.27■□□□□ 0.52
SNRPA1-201ENST00000254193 PDFQ9HBH1 243 aa18.27■□□□□ 0.52
SNRPA1-201ENST00000254193 UBA2Q9UBT2 640 aaPredicted RBP18.27■□□□□ 0.52
SNRPA1-201ENST00000254193 LCMT1Q9UIC8 334 aa18.27■□□□□ 0.52
SNRPA1-201ENST00000254193 INTUQ9ULD6 942 aa18.27■□□□□ 0.52
SNRPA1-201ENST00000254193 GON4LQ3T8J9 2241 aa18.27■□□□□ 0.52
SNRPA1-201ENST00000254193 SPAG17Q6Q759 2223 aa18.26■□□□□ 0.51
SNRPA1-201ENST00000254193 CEP250Q9BV73 2442 aa18.26■□□□□ 0.51
SNRPA1-201ENST00000254193 A0A1B0GTW7 788 aa18.26■□□□□ 0.51
SNRPA1-201ENST00000254193 SOWAHDA6NJG2 315 aa18.26■□□□□ 0.51
SNRPA1-201ENST00000254193 C4orf47A7E2U8 309 aa18.26■□□□□ 0.51
SNRPA1-201ENST00000254193 KRIT1O00522 736 aa18.26■□□□□ 0.51
SNRPA1-201ENST00000254193 SLC30A4O14863 429 aa18.26■□□□□ 0.51
SNRPA1-201ENST00000254193 BCAT2O15382 392 aaPredicted RBP18.26■□□□□ 0.51
SNRPA1-201ENST00000254193 SLC7A4O43246 635 aa18.26■□□□□ 0.51
SNRPA1-201ENST00000254193 MTA2O94776 668 aa18.26■□□□□ 0.51
SNRPA1-201ENST00000254193 GSRP00390 522 aa18.26■□□□□ 0.51
SNRPA1-201ENST00000254193 SDHBP21912 280 aa18.26■□□□□ 0.51
SNRPA1-201ENST00000254193 CD27P26842 260 aa18.26■□□□□ 0.51
SNRPA1-201ENST00000254193 MAN1A1P33908 653 aa18.26■□□□□ 0.51
SNRPA1-201ENST00000254193 ARSEP51690 589 aa18.26■□□□□ 0.51
SNRPA1-201ENST00000254193 LIMK1P53667 647 aa18.26■□□□□ 0.51
SNRPA1-201ENST00000254193 RHOAP61586 193 aa18.26■□□□□ 0.51
SNRPA1-201ENST00000254193 SNRPD1P62314 119 aaKnown RBP18.26■□□□□ 0.51
SNRPA1-201ENST00000254193 PUM1Q14671 1186 aaKnown RBP eCLIP18.26■□□□□ 0.51
SNRPA1-201ENST00000254193 MYLK3Q32MK0 819 aa18.26■□□□□ 0.51
SNRPA1-201ENST00000254193 PIP5KL1Q5T9C9 394 aa18.26■□□□□ 0.51
SNRPA1-201ENST00000254193 TMCO3Q6UWJ1 677 aa18.26■□□□□ 0.51
SNRPA1-201ENST00000254193 RHOT2Q8IXI1 618 aa18.26■□□□□ 0.51
SNRPA1-201ENST00000254193 PLPP6Q8IY26 295 aa18.26■□□□□ 0.51
SNRPA1-201ENST00000254193 CCDC170Q8IYT3 715 aa18.26■□□□□ 0.51
SNRPA1-201ENST00000254193 KCTD6Q8NC69 237 aa18.26■□□□□ 0.51
SNRPA1-201ENST00000254193 FAM71BQ8TC56 605 aa18.26■□□□□ 0.51
SNRPA1-201ENST00000254193 CASKIN2Q8WXE0 1202 aa18.26■□□□□ 0.51
SNRPA1-201ENST00000254193 ORAI3Q9BRQ5 295 aa18.26■□□□□ 0.51
SNRPA1-201ENST00000254193 ANP32EQ9BTT0 268 aa18.26■□□□□ 0.51
SNRPA1-201ENST00000254193 GTPBP2Q9BX10 602 aaKnown RBP18.26■□□□□ 0.51
SNRPA1-201ENST00000254193 DYRK4Q9NR20 520 aa18.26■□□□□ 0.51
SNRPA1-201ENST00000254193 TFR2Q9UP52 801 aa18.26■□□□□ 0.51
SNRPA1-201ENST00000254193 PCDHA13Q9Y5I0 950 aa18.26■□□□□ 0.51
SNRPA1-201ENST00000254193 THADAQ6YHU6 1953 aa18.26■□□□□ 0.51
SNRPA1-201ENST00000254193 C10orf142B7Z368 130 aa18.25■□□□□ 0.51
SNRPA1-201ENST00000254193 CDX4O14627 284 aaPredicted RBP18.25■□□□□ 0.51
SNRPA1-201ENST00000254193 PLRG1O43660 514 aaKnown RBP18.25■□□□□ 0.51
SNRPA1-201ENST00000254193 LCA5LO95447 670 aa18.25■□□□□ 0.51
SNRPA1-201ENST00000254193 ARHGAP25P42331 645 aa18.25■□□□□ 0.51
SNRPA1-201ENST00000254193 TAS2R38P59533 333 aa18.25■□□□□ 0.51
SNRPA1-201ENST00000254193 PPP2CBP62714 309 aa18.25■□□□□ 0.51
SNRPA1-201ENST00000254193 PPP2CAP67775 309 aa18.25■□□□□ 0.51
SNRPA1-201ENST00000254193 DPYSL3Q14195 570 aa18.25■□□□□ 0.51
SNRPA1-201ENST00000254193 SPA17Q15506 151 aa18.25■□□□□ 0.51
SNRPA1-201ENST00000254193 LZTR1Q8N653 840 aa18.25■□□□□ 0.51
SNRPA1-201ENST00000254193 SPC24Q8NBT2 197 aa18.25■□□□□ 0.51
SNRPA1-201ENST00000254193 OR2I1PQ8NGU4 316 aa18.25■□□□□ 0.51
SNRPA1-201ENST00000254193 VOPP1Q96AW1 172 aa18.25■□□□□ 0.51
SNRPA1-201ENST00000254193 GDAP1L1Q96MZ0 367 aa18.25■□□□□ 0.51
SNRPA1-201ENST00000254193 CALN1Q9BXU9 219 aa18.25■□□□□ 0.51
SNRPA1-201ENST00000254193 EBF2Q9HAK2 575 aa18.25■□□□□ 0.51
SNRPA1-201ENST00000254193 TM9SF3Q9HD45 589 aa18.25■□□□□ 0.51
SNRPA1-201ENST00000254193 TMEM9BQ9NQ34 198 aa18.25■□□□□ 0.51
SNRPA1-201ENST00000254193 EPN1Q9Y6I3 576 aaPredicted RBP18.25■□□□□ 0.51
SNRPA1-201ENST00000254193 PLXND1Q9Y4D7 1925 aa18.24■□□□□ 0.51
SNRPA1-201ENST00000254193 DCDC2BA2VCK2 349 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms