RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 SOG2Q08817 791 aa1.42□□□□□ -2.18
snR50snR50 HXT5P38695 592 aa1.41□□□□□ -2.18
snR50snR50 LGE1Q02796 332 aaKnown RBP1.41□□□□□ -2.18
snR50snR50 NTH2P35172 780 aa1.4□□□□□ -2.19
snR50snR50 GPT2P36148 743 aa1.4□□□□□ -2.19
snR50snR50 ETP1P38748 585 aaKnown RBP1.4□□□□□ -2.19
snR50snR50 INP51P40559 946 aaKnown RBP1.4□□□□□ -2.19
snR50snR50 LEM3P42838 414 aa1.4□□□□□ -2.19
snR50snR50 IOC3P43596 787 aa1.4□□□□□ -2.19
snR50snR50 YJL181WP46987 611 aa1.4□□□□□ -2.19
snR50snR50 BIO5P53744 561 aaKnown RBP1.4□□□□□ -2.19
snR50snR50 YDR132CQ03900 495 aa1.4□□□□□ -2.19
snR50snR50 TRE1Q08919 783 aa1.39□□□□□ -2.19
snR50snR50 BOI1P38041 980 aaKnown RBP1.38□□□□□ -2.19
snR50snR50 PPT1P53043 513 aa1.38□□□□□ -2.19
snR50snR50 SPO71Q03868 1245 aa1.38□□□□□ -2.19
snR50snR50 YDJ1P25491 409 aaKnown RBP1.37□□□□□ -2.19
snR50snR50 QDR2P40474 542 aa1.37□□□□□ -2.19
snR50snR50 ALD3P54114 506 aa1.37□□□□□ -2.19
snR50snR50 EAR1Q03212 550 aa1.37□□□□□ -2.19
snR50snR50 PPM2Q08282 695 aa1.37□□□□□ -2.19
snR50snR50 PRO1P32264 428 aa1.36□□□□□ -2.19
snR50snR50 ATG3P40344 310 aa1.36□□□□□ -2.19
snR50snR50 AIM21P40563 679 aa1.36□□□□□ -2.19
snR50snR50 RSC2Q06488 889 aa1.36□□□□□ -2.19
snR50snR50 YOR296WQ08748 1289 aa1.36□□□□□ -2.19
snR50snR50 SCD5P34758 872 aa1.35□□□□□ -2.19
snR50snR50 CUE2P36075 443 aaKnown RBP1.35□□□□□ -2.19
snR50snR50 BSD2P38356 321 aa1.35□□□□□ -2.19
snR50snR50 NTO1Q12311 748 aa1.35□□□□□ -2.19
snR50snR50 YVC1Q12324 675 aa1.35□□□□□ -2.19
snR50snR50 ICT1Q12385 394 aa1.35□□□□□ -2.19
snR50snR50 PMI40P29952 429 aaKnown RBP1.34□□□□□ -2.19
snR50snR50 YIL165CP40446 119 aa1.34□□□□□ -2.19
snR50snR50 YAP7Q08182 245 aa1.34□□□□□ -2.19
snR50snR50 YOR223WQ12015 292 aa1.34□□□□□ -2.19
snR50snR50 RPS4AP0CX35 261 aaKnown RBP1.33□□□□□ -2.2
snR50snR50 RPS4BP0CX36 261 aaKnown RBP1.33□□□□□ -2.2
snR50snR50 HCM1P25364 564 aa1.33□□□□□ -2.2
snR50snR50 GLC3P32775 704 aa1.33□□□□□ -2.2
snR50snR50 LDH1P38139 375 aa1.33□□□□□ -2.2
snR50snR50 PTC7P38797 343 aa1.33□□□□□ -2.2
snR50snR50 KIN4Q01919 800 aa1.33□□□□□ -2.2
snR50snR50 CYT1P07143 309 aa1.32□□□□□ -2.2
snR50snR50 HVG1P0CE11 249 aa1.32□□□□□ -2.2
snR50snR50 SPT5P27692 1063 aaKnown RBP1.32□□□□□ -2.2
snR50snR50 ALT1P52893 592 aa1.32□□□□□ -2.2
snR50snR50 SNO2P53823 222 aa1.32□□□□□ -2.2
snR50snR50 HAS1Q03532 505 aaKnown RBP1.32□□□□□ -2.2
snR50snR50 RGT1P32862 1170 aa1.31□□□□□ -2.2
snR50snR50 OAR1P35731 278 aa1.31□□□□□ -2.2
snR50snR50 CSE4P36012 229 aa1.31□□□□□ -2.2
snR50snR50 MOH1P38191 138 aa1.31□□□□□ -2.2
snR50snR50 YFL034WP43564 1073 aa1.31□□□□□ -2.2
snR50snR50 AFT2Q08957 416 aa1.31□□□□□ -2.2
snR50snR50 TMT1P32643 299 aa1.3□□□□□ -2.2
snR50snR50 DOT1Q04089 582 aaKnown RBP1.3□□□□□ -2.2
snR50snR50 PDI1P17967 522 aaKnown RBP1.29□□□□□ -2.2
snR50snR50 YUR1P26725 428 aa1.29□□□□□ -2.2
snR50snR50 GIP1P38229 639 aa1.29□□□□□ -2.2
snR50snR50 GTS1P40956 396 aa1.29□□□□□ -2.2
snR50snR50 QRI1P43123 477 aaKnown RBP1.29□□□□□ -2.2
snR50snR50 MNN10P50108 393 aaKnown RBP1.29□□□□□ -2.2
snR50snR50 PHO23P50947 330 aa1.29□□□□□ -2.2
snR50snR50 FAR11P53917 953 aa1.29□□□□□ -2.2
snR50snR50 UBP1P25037 809 aa1.28□□□□□ -2.2
snR50snR50 SPB4P25808 606 aaPredicted RBP1.28□□□□□ -2.2
snR50snR50 NEO1P40527 1151 aa1.28□□□□□ -2.2
snR50snR50 SPT20P50875 604 aa1.28□□□□□ -2.2
snR50snR50 YNR021WP53723 404 aaKnown RBP1.28□□□□□ -2.2
snR50snR50 FUS1P11710 512 aa1.27□□□□□ -2.21
snR50snR50 MEF2P39677 819 aa1.27□□□□□ -2.21
snR50snR50 MSH4P40965 878 aaPredicted RBP1.27□□□□□ -2.21
snR50snR50 YJR124CP47159 448 aa1.27□□□□□ -2.21
snR50snR50 GCN5Q03330 439 aa1.27□□□□□ -2.21
snR50snR50 EMG1Q06287 252 aaKnown RBP1.27□□□□□ -2.21
snR50snR50 NDJ1Q12366 352 aa1.27□□□□□ -2.21
snR50snR50 MDM10P18409 493 aa1.26□□□□□ -2.21
snR50snR50 VMA3P25515 160 aa1.26□□□□□ -2.21
snR50snR50 LST4P34239 828 aa1.26□□□□□ -2.21
snR50snR50 MSS4P38994 779 aa1.26□□□□□ -2.21
snR50snR50 SCS3P53012 380 aa1.26□□□□□ -2.21
snR50snR50 TSC13Q99190 310 aa1.26□□□□□ -2.21
snR50snR50 DEF1P35732 738 aaKnown RBP1.25□□□□□ -2.21
snR50snR50 YPP1P46951 817 aa1.25□□□□□ -2.21
snR50snR50 DUS4Q06063 367 aa1.25□□□□□ -2.21
snR50snR50 PMA1P05030 918 aaKnown RBP1.24□□□□□ -2.21
snR50snR50 LAM1P38851 1228 aa1.24□□□□□ -2.21
snR50snR50 NPL3Q01560 414 aaKnown RBP RIP-Chip data1.24□□□□□ -2.21not detected
snR50snR50 STE11P23561 717 aa1.23□□□□□ -2.21
snR50snR50 DOM34P33309 386 aa1.23□□□□□ -2.21
snR50snR50 SLX1P38324 304 aa1.23□□□□□ -2.21
snR50snR50 YMR074CQ04773 145 aa1.23□□□□□ -2.21
snR50snR50 SAS10Q12136 610 aaPredicted RBP1.23□□□□□ -2.21
snR50snR50 AIM7Q12156 149 aa1.23□□□□□ -2.21
snR50snR50 GLO4Q12320 285 aa1.23□□□□□ -2.21
snR50snR50 ENO2P00925 437 aaKnown RBP1.22□□□□□ -2.21
snR50snR50 SUP45P12385 437 aaKnown RBP1.22□□□□□ -2.21
snR50snR50 ISW1P38144 1129 aa1.22□□□□□ -2.21
snR50snR50 DYS1P38791 387 aa1.22□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms