RNA–Protein interactions for RNA: YPR101W

SNT309, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene SNT309, Length 528 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNT309	YPR101W	SAC3	P46674	1301 aa		7.89	□□□□□ -1.15
SNT309	YPR101W	ARG8	P18544	423 aa		7.89	□□□□□ -1.15
SNT309	YPR101W	PEP3	P27801	918 aa		7.89	□□□□□ -1.15
SNT309	YPR101W	FBP26	P32604	452 aa		7.89	□□□□□ -1.15
SNT309	YPR101W	SLA1	P32790	1244 aa		7.89	□□□□□ -1.15
SNT309	YPR101W	RRM3	P38766	723 aa		7.89	□□□□□ -1.15
SNT309	YPR101W	VID28	P40547	921 aa		7.89	□□□□□ -1.15
SNT309	YPR101W	CEP3	P40969	608 aa		7.89	□□□□□ -1.15
SNT309	YPR101W	YPT11	P48559	417 aa		7.89	□□□□□ -1.15
SNT309	YPR101W	PML39	Q03760	334 aa		7.89	□□□□□ -1.15
SNT309	YPR101W	PHM7	Q12252	991 aa		7.89	□□□□□ -1.15
SNT309	YPR101W	GPA1	P08539	472 aa		7.88	□□□□□ -1.15
SNT309	YPR101W	RFT1	P38206	574 aa	Predicted RBP	7.88	□□□□□ -1.15
SNT309	YPR101W	TFG2	P41896	400 aa	Predicted RBP	7.88	□□□□□ -1.15
SNT309	YPR101W	YLR407W	Q06070	228 aa		7.88	□□□□□ -1.15
SNT309	YPR101W	SFI1	Q12369	946 aa		7.88	□□□□□ -1.15
SNT309	YPR101W	RIM15	P43565	1770 aa		7.87	□□□□□ -1.15
SNT309	YPR101W	PGI1	P12709	554 aa	Known RBP	7.87	□□□□□ -1.15
SNT309	YPR101W	LTV1	P34078	463 aa		7.87	□□□□□ -1.15
SNT309	YPR101W	SIS2	P36024	562 aa		7.87	□□□□□ -1.15
SNT309	YPR101W	RFC5	P38251	354 aa		7.87	□□□□□ -1.15
SNT309	YPR101W	YER130C	P39959	443 aa		7.87	□□□□□ -1.15
SNT309	YPR101W	BUD6	P41697	788 aa		7.87	□□□□□ -1.15
SNT309	YPR101W	ENT3	P47160	408 aa		7.87	□□□□□ -1.15
SNT309	YPR101W	ECM23	Q02710	187 aa		7.87	□□□□□ -1.15
SNT309	YPR101W	SNU66	Q12420	587 aa	Predicted RBP	7.87	□□□□□ -1.15
SNT309	YPR101W	PGA3	Q12746	312 aa	Known RBP	7.87	□□□□□ -1.15
SNT309	YPR101W	SEC18	P18759	758 aa	Known RBP	7.86	□□□□□ -1.15
SNT309	YPR101W	SPC110	P32380	944 aa		7.86	□□□□□ -1.15
SNT309	YPR101W	MFT1	P33441	392 aa	Known RBP	7.86	□□□□□ -1.15
SNT309	YPR101W	YKT6	P36015	200 aa	Known RBP	7.86	□□□□□ -1.15
SNT309	YPR101W	GRX1	P25373	110 aa	Known RBP	7.85	□□□□□ -1.15
SNT309	YPR101W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	7.85	□□□□□ -1.15	not detected
SNT309	YPR101W	MNR2	P35724	969 aa		7.85	□□□□□ -1.15
SNT309	YPR101W	UBP16	Q02863	499 aa		7.85	□□□□□ -1.15
SNT309	YPR101W	FCP1	Q03254	732 aa		7.85	□□□□□ -1.15
SNT309	YPR101W	TUM1	Q08686	304 aa	Known RBP	7.85	□□□□□ -1.15
SNT309	YPR101W	SSF2	Q12153	453 aa	Predicted RBP	7.85	□□□□□ -1.15
SNT309	YPR101W	ADR1	P07248	1323 aa		7.84	□□□□□ -1.15
SNT309	YPR101W	RPL22A	P05749	121 aa	Known RBP	7.84	□□□□□ -1.15
SNT309	YPR101W	GSY2	P27472	705 aa		7.84	□□□□□ -1.15
SNT309	YPR101W	CIN4	P39110	191 aa		7.84	□□□□□ -1.15
SNT309	YPR101W	YNL193W	P53870	558 aa		7.84	□□□□□ -1.15
SNT309	YPR101W	FAR11	P53917	953 aa		7.84	□□□□□ -1.15
SNT309	YPR101W	RPN7	Q06103	429 aa	Known RBP	7.84	□□□□□ -1.15
SNT309	YPR101W	ESF1	Q06344	628 aa	Known RBP	7.84	□□□□□ -1.15
SNT309	YPR101W	ENT1	Q12518	454 aa		7.84	□□□□□ -1.15
SNT309	YPR101W	LAM4	P38800	1345 aa		7.83	□□□□□ -1.16
SNT309	YPR101W	PIF1	P07271	859 aa		7.83	□□□□□ -1.16
SNT309	YPR101W	PET111	P08468	800 aa		7.83	□□□□□ -1.16
SNT309	YPR101W	IMP2'	P32351	346 aa		7.83	□□□□□ -1.16
SNT309	YPR101W	RGA1	P39083	1007 aa		7.83	□□□□□ -1.16
SNT309	YPR101W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	7.83	□□□□□ -1.16	not detected
SNT309	YPR101W	PKH3	Q03306	898 aa	Predicted RBP	7.83	□□□□□ -1.16
SNT309	YPR101W	VPS60	Q03390	229 aa		7.83	□□□□□ -1.16
SNT309	YPR101W	MPH3	P0CE00	602 aa		7.82	□□□□□ -1.16
SNT309	YPR101W	CBP3	P21560	335 aa		7.82	□□□□□ -1.16
SNT309	YPR101W	DIT2	P21595	489 aa		7.82	□□□□□ -1.16
SNT309	YPR101W	MET1	P36150	593 aa		7.82	□□□□□ -1.16
SNT309	YPR101W	CTH1	P47976	325 aa		7.82	□□□□□ -1.16
SNT309	YPR101W	ENP2	P48234	707 aa	Known RBP	7.82	□□□□□ -1.16
SNT309	YPR101W	ARH1	P48360	493 aa		7.82	□□□□□ -1.16
SNT309	YPR101W	WAR1	Q03631	944 aa		7.82	□□□□□ -1.16
SNT309	YPR101W	TAH18	Q12181	623 aa		7.82	□□□□□ -1.16
SNT309	YPR101W	MRC1	P25588	1096 aa		7.81	□□□□□ -1.16
SNT309	YPR101W	SRP40	P32583	406 aa	Predicted RBP	7.81	□□□□□ -1.16
SNT309	YPR101W	CRG1	P38892	291 aa	RIP-Chip data	7.81	□□□□□ -1.16	not detected
SNT309	YPR101W	YMR147W	P40218	223 aa	Known RBP	7.81	□□□□□ -1.16
SNT309	YPR101W	FYV10	P40492	516 aa		7.81	□□□□□ -1.16
SNT309	YPR101W	VMS1	Q04311	632 aa	Known RBP	7.81	□□□□□ -1.16
SNT309	YPR101W	COG4	Q06096	861 aa		7.81	□□□□□ -1.16
SNT309	YPR101W	POM152	P39685	1337 aa		7.8	□□□□□ -1.16
SNT309	YPR101W	NOC2	P39744	710 aa	Known RBP	7.8	□□□□□ -1.16
SNT309	YPR101W	SRC1	Q03707	834 aa		7.8	□□□□□ -1.16
SNT309	YPR101W	SPN1	Q06505	410 aa	Predicted RBP	7.8	□□□□□ -1.16
SNT309	YPR101W	ENV9	Q08651	330 aa		7.8	□□□□□ -1.16
SNT309	YPR101W	RRI2	Q12348	645 aa		7.8	□□□□□ -1.16
SNT309	YPR101W	HXK1	P04806	485 aa	Known RBP	7.79	□□□□□ -1.16
SNT309	YPR101W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	7.79	□□□□□ -1.16	not detected
SNT309	YPR101W	YGL082W	P53155	381 aa		7.79	□□□□□ -1.16
SNT309	YPR101W	ALD3	P54114	506 aa		7.79	□□□□□ -1.16
SNT309	YPR101W	KAR5	Q04746	504 aa		7.79	□□□□□ -1.16
SNT309	YPR101W	EST2	Q06163	884 aa		7.79	□□□□□ -1.16
SNT309	YPR101W	YCG1	Q06680	1035 aa		7.79	□□□□□ -1.16
SNT309	YPR101W	FAS2	P19097	1887 aa	Known RBP	7.79	□□□□□ -1.16
SNT309	YPR101W	HSP82	P02829	709 aa	Known RBP	7.78	□□□□□ -1.16
SNT309	YPR101W	NPL4	P33755	580 aa		7.78	□□□□□ -1.16
SNT309	YPR101W	EPL1	P43572	832 aa		7.78	□□□□□ -1.16
SNT309	YPR101W	SMC3	P47037	1230 aa		7.78	□□□□□ -1.16
SNT309	YPR101W	VPS75	P53853	264 aa		7.78	□□□□□ -1.16
SNT309	YPR101W	GRE2	Q12068	342 aa	Known RBP	7.78	□□□□□ -1.16
SNT309	YPR101W	COB	P00163	385 aa		7.77	□□□□□ -1.17
SNT309	YPR101W	RGP1	P16664	663 aa		7.77	□□□□□ -1.17
SNT309	YPR101W	MCM4	P30665	933 aa	Known RBP	7.77	□□□□□ -1.17
SNT309	YPR101W	ASF1	P32447	279 aa		7.77	□□□□□ -1.17
SNT309	YPR101W	SER1	P33330	395 aa	Known RBP	7.77	□□□□□ -1.17
SNT309	YPR101W	RER2	P35196	286 aa		7.77	□□□□□ -1.17
SNT309	YPR101W	GEF1	P37020	779 aa		7.77	□□□□□ -1.17
SNT309	YPR101W	HAL5	P38970	855 aa	Known RBP	7.77	□□□□□ -1.17
SNT309	YPR101W	IRC8	P47046	822 aa		7.77	□□□□□ -1.17

Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms