RNA–Protein interactions for RNA: YPL142C

YPL142C, Transcript of Dubious open reading frame, yeast

Gene YPL142C, Length 318 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPL142C	YPL142C	VPS35	P34110	944 aa		4.31	□□□□□ -1.72
YPL142C	YPL142C	AHP1	P38013	176 aa	Known RBP	4.31	□□□□□ -1.72
YPL142C	YPL142C	CIC1	P38779	376 aa	Known RBP	4.31	□□□□□ -1.72
YPL142C	YPL142C	DYS1	P38791	387 aa		4.31	□□□□□ -1.72
YPL142C	YPL142C	SLN1	P39928	1220 aa	Predicted RBP	4.31	□□□□□ -1.72
YPL142C	YPL142C	TY1A-DR3	Q12441	440 aa		4.31	□□□□□ -1.72
YPL142C	YPL142C	MSN1	P22148	382 aa		4.3	□□□□□ -1.72
YPL142C	YPL142C	MAC1	P35192	417 aa		4.3	□□□□□ -1.72
YPL142C	YPL142C	FAA3	P39002	694 aa		4.3	□□□□□ -1.72
YPL142C	YPL142C	YTA6	P40328	754 aa		4.3	□□□□□ -1.72
YPL142C	YPL142C	LSB6	P42951	607 aa		4.3	□□□□□ -1.72
YPL142C	YPL142C	JJJ2	P46997	583 aa		4.3	□□□□□ -1.72
YPL142C	YPL142C	MTO1	P53070	669 aa		4.3	□□□□□ -1.72
YPL142C	YPL142C	INP54	Q08227	384 aa	Known RBP	4.3	□□□□□ -1.72
YPL142C	YPL142C	TIF6	Q12522	245 aa	Known RBP	4.3	□□□□□ -1.72
YPL142C	YPL142C	FPS1	P23900	669 aa		4.29	□□□□□ -1.72
YPL142C	YPL142C	NAP1	P25293	417 aa	Known RBP	4.29	□□□□□ -1.72
YPL142C	YPL142C	PET112	P33893	541 aa		4.29	□□□□□ -1.72
YPL142C	YPL142C	SHM1	P37292	490 aa	Predicted RBP	4.29	□□□□□ -1.72
YPL142C	YPL142C	BSD2	P38356	321 aa		4.29	□□□□□ -1.72
YPL142C	YPL142C	YHL008C	P38750	627 aa		4.29	□□□□□ -1.72
YPL142C	YPL142C	RGD2	P43556	714 aa		4.29	□□□□□ -1.72
YPL142C	YPL142C	CWC24	P53769	259 aa		4.29	□□□□□ -1.72
YPL142C	YPL142C	VPS16	Q03308	798 aa		4.29	□□□□□ -1.72
YPL142C	YPL142C	DAL4	Q04895	635 aa		4.29	□□□□□ -1.72
YPL142C	YPL142C	ESF1	Q06344	628 aa	Known RBP	4.29	□□□□□ -1.72
YPL142C	YPL142C	MCA1	Q08601	432 aa		4.29	□□□□□ -1.72
YPL142C	YPL142C	RAD2	P07276	1031 aa		4.28	□□□□□ -1.72
YPL142C	YPL142C	CYC8	P14922	966 aa		4.28	□□□□□ -1.72
YPL142C	YPL142C	KAP122	P32767	1081 aa		4.28	□□□□□ -1.72
YPL142C	YPL142C	TAT1	P38085	619 aa		4.28	□□□□□ -1.72
YPL142C	YPL142C	PSY2	P40164	858 aa		4.28	□□□□□ -1.72
YPL142C	YPL142C	YGR122W	P53272	402 aa		4.28	□□□□□ -1.72
YPL142C	YPL142C	RSC4	Q02206	625 aa		4.28	□□□□□ -1.72
YPL142C	YPL142C	UTP4	Q06679	776 aa	Known RBP	4.28	□□□□□ -1.72
YPL142C	YPL142C	RPS31	P05759	152 aa	Known RBP	4.27	□□□□□ -1.73
YPL142C	YPL142C	CLN2	P20438	545 aa		4.27	□□□□□ -1.73
YPL142C	YPL142C	IRE1	P32361	1115 aa		4.27	□□□□□ -1.73
YPL142C	YPL142C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.27	□□□□□ -1.73	not detected
YPL142C	YPL142C	IRS4	P36115	615 aa	Known RBP	4.27	□□□□□ -1.73
YPL142C	YPL142C	NTA1	P40354	457 aa		4.27	□□□□□ -1.73
YPL142C	YPL142C	PIN2	Q12057	282 aa		4.27	□□□□□ -1.73
YPL142C	YPL142C	YOL098C	Q12496	1037 aa		4.27	□□□□□ -1.73
YPL142C	YPL142C	SRP40	P32583	406 aa	Predicted RBP	4.26	□□□□□ -1.73
YPL142C	YPL142C	UGA4	P32837	571 aa		4.26	□□□□□ -1.73
YPL142C	YPL142C	ISW1	P38144	1129 aa		4.26	□□□□□ -1.73
YPL142C	YPL142C	GIP1	P38229	639 aa		4.26	□□□□□ -1.73
YPL142C	YPL142C	MON1	P53129	644 aa		4.26	□□□□□ -1.73
YPL142C	YPL142C	RMD1	Q03441	430 aa		4.26	□□□□□ -1.73
YPL142C	YPL142C	IOC4	Q04213	475 aa		4.26	□□□□□ -1.73
YPL142C	YPL142C	WRS1	Q12109	432 aa	Known RBP	4.26	□□□□□ -1.73
YPL142C	YPL142C	HXK1	P04806	485 aa	Known RBP	4.25	□□□□□ -1.73
YPL142C	YPL142C	PDC6	P26263	563 aa	Known RBP	4.25	□□□□□ -1.73
YPL142C	YPL142C	PRP40	P33203	583 aa	Known RBP	4.25	□□□□□ -1.73
YPL142C	YPL142C	BRN1	P38170	754 aa		4.25	□□□□□ -1.73
YPL142C	YPL142C	ECM2	P38241	364 aa	Known RBP	4.25	□□□□□ -1.73
YPL142C	YPL142C	PSH1	Q12161	406 aa		4.25	□□□□□ -1.73
YPL142C	YPL142C	FLP1	P03870	423 aa		4.24	□□□□□ -1.73
YPL142C	YPL142C	YKL091C	P33324	310 aa	Known RBP	4.24	□□□□□ -1.73
YPL142C	YPL142C	AIM46	P38885	310 aa		4.24	□□□□□ -1.73
YPL142C	YPL142C	MRPS18	P42847	217 aa		4.24	□□□□□ -1.73
YPL142C	YPL142C	YCS4	Q06156	1176 aa		4.24	□□□□□ -1.73
YPL142C	YPL142C	FPR4	Q06205	392 aa	Predicted RBP	4.24	□□□□□ -1.73
YPL142C	YPL142C	YOR296W	Q08748	1289 aa		4.24	□□□□□ -1.73
YPL142C	YPL142C	SSF2	Q12153	453 aa	Predicted RBP	4.24	□□□□□ -1.73
YPL142C	YPL142C	RPC31	P17890	251 aa		4.23	□□□□□ -1.73
YPL142C	YPL142C	PRI2	P20457	528 aa		4.23	□□□□□ -1.73
YPL142C	YPL142C	PRE9	P23638	258 aa	Known RBP	4.23	□□□□□ -1.73
YPL142C	YPL142C	MCM5	P29496	775 aa	Known RBP	4.23	□□□□□ -1.73
YPL142C	YPL142C	KNS1	P32350	737 aa	Predicted RBP	4.23	□□□□□ -1.73
YPL142C	YPL142C	IOC3	P43596	787 aa		4.23	□□□□□ -1.73
YPL142C	YPL142C	CUS1	Q02554	436 aa	Predicted RBP	4.23	□□□□□ -1.73
YPL142C	YPL142C	GDE1	Q02979	1223 aa		4.23	□□□□□ -1.73
YPL142C	YPL142C	PDC5	P16467	563 aa	Known RBP	4.22	□□□□□ -1.73
YPL142C	YPL142C	PPG1	P32838	368 aa		4.22	□□□□□ -1.73
YPL142C	YPL142C	MRPL16	P38064	232 aa		4.22	□□□□□ -1.73
YPL142C	YPL142C	YBR287W	P38355	427 aa		4.22	□□□□□ -1.73
YPL142C	YPL142C	IRC24	P40580	263 aa		4.22	□□□□□ -1.73
YPL142C	YPL142C	RNH70	P53331	553 aa		4.22	□□□□□ -1.73
YPL142C	YPL142C	CTR9	P89105	1077 aa		4.22	□□□□□ -1.73
YPL142C	YPL142C	EMG1	Q06287	252 aa	Known RBP	4.22	□□□□□ -1.73
YPL142C	YPL142C	COB	P00163	385 aa		4.21	□□□□□ -1.74
YPL142C	YPL142C	MNR2	P35724	969 aa		4.21	□□□□□ -1.74
YPL142C	YPL142C	PRY1	P47032	299 aa		4.21	□□□□□ -1.74
YPL142C	YPL142C	FAA4	P47912	694 aa	Known RBP	4.21	□□□□□ -1.74
YPL142C	YPL142C	ALO1	P54783	526 aa	Known RBP	4.21	□□□□□ -1.74
YPL142C	YPL142C	ULP1	Q02724	621 aa		4.21	□□□□□ -1.74
YPL142C	YPL142C	YPL034W	Q03083	165 aa		4.21	□□□□□ -1.74
YPL142C	YPL142C	CDC53	Q12018	815 aa	Known RBP	4.21	□□□□□ -1.74
YPL142C	YPL142C	MCD1	Q12158	566 aa		4.21	□□□□□ -1.74
YPL142C	YPL142C	LEU1	P07264	779 aa	Known RBP	4.2	□□□□□ -1.74
YPL142C	YPL142C	KAR2	P16474	682 aa	Known RBP	4.2	□□□□□ -1.74
YPL142C	YPL142C	PYC2	P32327	1180 aa	Known RBP	4.2	□□□□□ -1.74
YPL142C	YPL142C	DUR3	P33413	735 aa		4.2	□□□□□ -1.74
YPL142C	YPL142C	SPC42	P36094	363 aa		4.2	□□□□□ -1.74
YPL142C	YPL142C	ITC1	P53125	1264 aa		4.2	□□□□□ -1.74
YPL142C	YPL142C	YNR040W	P53736	256 aa		4.2	□□□□□ -1.74
YPL142C	YPL142C	YPL109C	Q02981	657 aa		4.2	□□□□□ -1.74
YPL142C	YPL142C	RGP1	P16664	663 aa		4.19	□□□□□ -1.74
YPL142C	YPL142C	YIL165C	P40446	119 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms