RNA–Protein interactions for RNA: YPL017C

IRC15, Transcript of Microtubule associated protein, yeast

Gene IRC15, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IRC15	YPL017C	SIS2	P36024	562 aa		13.82	□□□□□ -0.2
IRC15	YPL017C	RPG1	P38249	964 aa	Known RBP	13.82	□□□□□ -0.2
IRC15	YPL017C	AKR1	P39010	764 aa		13.82	□□□□□ -0.2
IRC15	YPL017C	YPT11	P48559	417 aa		13.82	□□□□□ -0.2
IRC15	YPL017C	RPT4	P53549	437 aa	Known RBP	13.82	□□□□□ -0.2
IRC15	YPL017C	HDA1	P53973	706 aa		13.82	□□□□□ -0.2
IRC15	YPL017C	SES1	P07284	462 aa	Known RBP	13.81	□□□□□ -0.2
IRC15	YPL017C	HCA4	P20448	770 aa	Known RBP	13.81	□□□□□ -0.2
IRC15	YPL017C	IOC3	P43596	787 aa		13.81	□□□□□ -0.2
IRC15	YPL017C	ISW2	Q08773	1120 aa		13.81	□□□□□ -0.2
IRC15	YPL017C	HSP82	P02829	709 aa	Known RBP	13.8	□□□□□ -0.2
IRC15	YPL017C	DIT2	P21595	489 aa		13.8	□□□□□ -0.2
IRC15	YPL017C	BUD31	P25337	157 aa	Predicted RBP	13.8	□□□□□ -0.2
IRC15	YPL017C	FRD1	P32614	470 aa	Known RBP	13.8	□□□□□ -0.2
IRC15	YPL017C	RPT3	P33298	428 aa	Known RBP	13.8	□□□□□ -0.2
IRC15	YPL017C	BDF1	P35817	686 aa		13.8	□□□□□ -0.2
IRC15	YPL017C	RRP8	P38961	392 aa	Known RBP	13.8	□□□□□ -0.2
IRC15	YPL017C	FYV10	P40492	516 aa		13.8	□□□□□ -0.2
IRC15	YPL017C	SRP40	P32583	406 aa	Predicted RBP	13.8	□□□□□ -0.2
IRC15	YPL017C	RPN10	P38886	268 aa	Known RBP	13.8	□□□□□ -0.2
IRC15	YPL017C	CTH1	P47976	325 aa		13.8	□□□□□ -0.2
IRC15	YPL017C	TIM50	Q02776	476 aa		13.8	□□□□□ -0.2
IRC15	YPL017C	IRC4	Q03036	179 aa		13.8	□□□□□ -0.2
IRC15	YPL017C	TFC8	Q12308	588 aa		13.8	□□□□□ -0.2
IRC15	YPL017C	CYB2	P00175	591 aa		13.79	□□□□□ -0.2
IRC15	YPL017C	MPH3	P0CE00	602 aa		13.79	□□□□□ -0.2
IRC15	YPL017C	PGI1	P12709	554 aa	Known RBP	13.79	□□□□□ -0.2
IRC15	YPL017C	NPL4	P33755	580 aa		13.79	□□□□□ -0.2
IRC15	YPL017C	RFT1	P38206	574 aa	Predicted RBP	13.79	□□□□□ -0.2
IRC15	YPL017C	PTK2	P47116	818 aa	Known RBP	13.79	□□□□□ -0.2
IRC15	YPL017C	UFD2	P54860	961 aa		13.79	□□□□□ -0.2
IRC15	YPL017C	RPS15	Q01855	142 aa	Known RBP	13.79	□□□□□ -0.2
IRC15	YPL017C	CYC8	P14922	966 aa		13.78	□□□□□ -0.2
IRC15	YPL017C	LCB1	P25045	558 aa	Known RBP	13.78	□□□□□ -0.2
IRC15	YPL017C	MCM4	P30665	933 aa	Known RBP	13.78	□□□□□ -0.2
IRC15	YPL017C	TOS1	P38288	455 aa		13.78	□□□□□ -0.2
IRC15	YPL017C	PTK1	P36002	662 aa	Predicted RBP	13.77	□□□□□ -0.21
IRC15	YPL017C	RPN1	P38764	993 aa	Known RBP	13.77	□□□□□ -0.21
IRC15	YPL017C	HPC2	Q01448	625 aa		13.77	□□□□□ -0.21
IRC15	YPL017C	CBP3	P21560	335 aa		13.76	□□□□□ -0.21
IRC15	YPL017C	SWI4	P25302	1093 aa	Known RBP	13.76	□□□□□ -0.21
IRC15	YPL017C	BOI1	P38041	980 aa	Known RBP	13.76	□□□□□ -0.21
IRC15	YPL017C	TCB2	P48231	1178 aa		13.76	□□□□□ -0.21
IRC15	YPL017C	TFC6	Q06339	672 aa		13.76	□□□□□ -0.21
IRC15	YPL017C	DCS2	Q12123	353 aa		13.76	□□□□□ -0.21
IRC15	YPL017C	GEF1	P37020	779 aa		13.75	□□□□□ -0.21
IRC15	YPL017C	RRM3	P38766	723 aa		13.75	□□□□□ -0.21
IRC15	YPL017C	HXK1	P04806	485 aa	Known RBP	13.74	□□□□□ -0.21
IRC15	YPL017C	RGP1	P16664	663 aa		13.74	□□□□□ -0.21
IRC15	YPL017C	GSY2	P27472	705 aa		13.74	□□□□□ -0.21
IRC15	YPL017C	KRE2	P27809	442 aa		13.74	□□□□□ -0.21
IRC15	YPL017C	CDC6	P09119	513 aa		13.74	□□□□□ -0.21
IRC15	YPL017C	VPS1	P21576	704 aa	Known RBP	13.74	□□□□□ -0.21
IRC15	YPL017C	YKT6	P36015	200 aa	Known RBP	13.74	□□□□□ -0.21
IRC15	YPL017C	YHL050C	P38721	697 aa		13.74	□□□□□ -0.21
IRC15	YPL017C	SAS4	Q04003	481 aa		13.74	□□□□□ -0.21
IRC15	YPL017C	ESC2	Q06340	456 aa		13.74	□□□□□ -0.21
IRC15	YPL017C	HKR1	P41809	1802 aa		13.73	□□□□□ -0.21
IRC15	YPL017C	ANP1	P32629	500 aa		13.73	□□□□□ -0.21
IRC15	YPL017C	BMH2	P34730	273 aa	Known RBP	13.73	□□□□□ -0.21
IRC15	YPL017C	SSA2	P10592	639 aa	Known RBP	13.72	□□□□□ -0.21
IRC15	YPL017C	NOC2	P39744	710 aa	Known RBP	13.72	□□□□□ -0.21
IRC15	YPL017C	YFH7	P43591	353 aa		13.72	□□□□□ -0.21
IRC15	YPL017C	IRC3	Q06683	689 aa		13.72	□□□□□ -0.21
IRC15	YPL017C	MFT1	P33441	392 aa	Known RBP	13.71	□□□□□ -0.21
IRC15	YPL017C	MNR2	P35724	969 aa		13.71	□□□□□ -0.21
IRC15	YPL017C	EBP2	P36049	427 aa	Known RBP	13.71	□□□□□ -0.21
IRC15	YPL017C	TOS4	Q06266	489 aa		13.71	□□□□□ -0.21
IRC15	YPL017C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	13.71	□□□□□ -0.21	not detected
IRC15	YPL017C	URA1	P28272	314 aa	Predicted RBP	13.7	□□□□□ -0.22
IRC15	YPL017C	MDL2	P33311	773 aa		13.7	□□□□□ -0.22
IRC15	YPL017C	MYO3	P36006	1272 aa		13.7	□□□□□ -0.22
IRC15	YPL017C	WAR1	Q03631	944 aa		13.7	□□□□□ -0.22
IRC15	YPL017C	GET3	Q12154	354 aa	Known RBP	13.7	□□□□□ -0.22
IRC15	YPL017C	CSM2	P40465	213 aa		13.69	□□□□□ -0.22
IRC15	YPL017C	MRD1	Q06106	887 aa	Known RBP	13.69	□□□□□ -0.22
IRC15	YPL017C	PRI1	P10363	409 aa		13.69	□□□□□ -0.22
IRC15	YPL017C	RTS1	P38903	757 aa		13.69	□□□□□ -0.22
IRC15	YPL017C	STU2	P46675	888 aa		13.69	□□□□□ -0.22
IRC15	YPL017C	FLO1	P32768	1537 aa		13.68	□□□□□ -0.22
IRC15	YPL017C	SIT4	P20604	311 aa		13.68	□□□□□ -0.22
IRC15	YPL017C	PSY4	P38193	441 aa		13.68	□□□□□ -0.22
IRC15	YPL017C	MSH4	P40965	878 aa	Predicted RBP	13.68	□□□□□ -0.22
IRC15	YPL017C	YOR111W	Q99210	232 aa		13.68	□□□□□ -0.22
IRC15	YPL017C	SNF3	P10870	884 aa		13.67	□□□□□ -0.22
IRC15	YPL017C	NSG2	P53898	299 aa		13.66	□□□□□ -0.22
IRC15	YPL017C	NOP58	Q12499	511 aa	Known RBP	13.66	□□□□□ -0.22
IRC15	YPL017C	MAK31	P23059	88 aa		13.65	□□□□□ -0.22
IRC15	YPL017C	RIT1	P23796	513 aa		13.65	□□□□□ -0.22
IRC15	YPL017C	RXT2	P38255	430 aa		13.65	□□□□□ -0.22
IRC15	YPL017C	PCI8	P40512	444 aa		13.65	□□□□□ -0.22
IRC15	YPL017C	JJJ2	P46997	583 aa		13.65	□□□□□ -0.22
IRC15	YPL017C	CSC1	Q06538	782 aa		13.65	□□□□□ -0.22
IRC15	YPL017C	PRO3	P32263	286 aa	Known RBP	13.64	□□□□□ -0.23
IRC15	YPL017C	SMY1	P32364	656 aa	Known RBP	13.64	□□□□□ -0.23
IRC15	YPL017C	MAL31	P38156	614 aa		13.64	□□□□□ -0.23
IRC15	YPL017C	PFF1	P38244	976 aa		13.64	□□□□□ -0.23
IRC15	YPL017C	SET4	P42948	560 aa		13.64	□□□□□ -0.23
IRC15	YPL017C	PIP2	P52960	996 aa		13.64	□□□□□ -0.23
IRC15	YPL017C	CUE3	P53137	624 aa	Known RBP	13.64	□□□□□ -0.23

Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms