RNA–Protein interactions for RNA: YPL010W

RET3, Transcript of Zeta subunit of the coatomer complex (COPI), yeast

Gene RET3, Length 570 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RET3	YPL010W	THI72	Q08579	599 aa		5.99	□□□□□ -1.45
RET3	YPL010W	CYT1	P07143	309 aa		5.98	□□□□□ -1.45
RET3	YPL010W	HAP4	P14064	554 aa		5.98	□□□□□ -1.45
RET3	YPL010W	ALD2	P47771	506 aa		5.98	□□□□□ -1.45
RET3	YPL010W	ACS2	P52910	683 aa	Known RBP	5.98	□□□□□ -1.45
RET3	YPL010W	GAS4	Q08271	471 aa		5.98	□□□□□ -1.45
RET3	YPL010W	YNL165W	P53891	406 aa		5.97	□□□□□ -1.45
RET3	YPL010W	UTP4	Q06679	776 aa	Known RBP	5.97	□□□□□ -1.45
RET3	YPL010W	YTA6	P40328	754 aa		5.96	□□□□□ -1.46
RET3	YPL010W	STB3	Q12427	513 aa		5.96	□□□□□ -1.46
RET3	YPL010W	RGP1	P16664	663 aa		5.95	□□□□□ -1.46
RET3	YPL010W	KNS1	P32350	737 aa	Predicted RBP	5.95	□□□□□ -1.46
RET3	YPL010W	TY1B-NL2	Q99337	1749 aa	Known RBP	5.95	□□□□□ -1.46
RET3	YPL010W	GAL2	P13181	574 aa		5.94	□□□□□ -1.46
RET3	YPL010W	NGR1	P32831	672 aa	Known RBP	5.94	□□□□□ -1.46
RET3	YPL010W	MCX1	P38323	520 aa	Predicted RBP	5.94	□□□□□ -1.46
RET3	YPL010W	TY1A-DR2	Q03964	440 aa	Known RBP	5.94	□□□□□ -1.46
RET3	YPL010W	VMR1	P38735	1592 aa		5.93	□□□□□ -1.46
RET3	YPL010W	MLF3	P32047	452 aa		5.93	□□□□□ -1.46
RET3	YPL010W	MSC7	P38694	644 aa		5.93	□□□□□ -1.46
RET3	YPL010W	SKN7	P38889	622 aa		5.93	□□□□□ -1.46
RET3	YPL010W	CCT8	P47079	568 aa	Known RBP	5.93	□□□□□ -1.46
RET3	YPL010W	YPR053C	Q6Q5F3	151 aa		5.93	□□□□□ -1.46
RET3	YPL010W	Q0182	Q9ZZW1	134 aa		5.93	□□□□□ -1.46
RET3	YPL010W	PDC5	P16467	563 aa	Known RBP	5.92	□□□□□ -1.46
RET3	YPL010W	SCD5	P34758	872 aa		5.92	□□□□□ -1.46
RET3	YPL010W	HXT5	P38695	592 aa		5.92	□□□□□ -1.46
RET3	YPL010W	SBE2	P42223	864 aa	Known RBP	5.92	□□□□□ -1.46
RET3	YPL010W	SKP1	P52286	194 aa		5.92	□□□□□ -1.46
RET3	YPL010W	TTI1	P36097	1038 aa		5.91	□□□□□ -1.46
RET3	YPL010W	MET1	P36150	593 aa		5.91	□□□□□ -1.46
RET3	YPL010W	ROM1	P53046	1155 aa		5.91	□□□□□ -1.46
RET3	YPL010W	DMA2	P53924	522 aa		5.91	□□□□□ -1.46
RET3	YPL010W	HEH2	Q03281	663 aa		5.91	□□□□□ -1.46
RET3	YPL010W	TDA6	Q06466	467 aa		5.91	□□□□□ -1.46
RET3	YPL010W	YBT1	P32386	1661 aa		5.91	□□□□□ -1.46
RET3	YPL010W	KTR7	P40504	517 aa		5.9	□□□□□ -1.46
RET3	YPL010W	YMR074C	Q04773	145 aa		5.9	□□□□□ -1.46
RET3	YPL010W	USO1	P25386	1790 aa		5.9	□□□□□ -1.47
RET3	YPL010W	IML1	P47170	1584 aa		5.89	□□□□□ -1.47
RET3	YPL010W	TGL4	P36165	910 aa		5.89	□□□□□ -1.47
RET3	YPL010W	RIA1	P53893	1110 aa		5.89	□□□□□ -1.47
RET3	YPL010W	YMR187C	Q03236	431 aa		5.89	□□□□□ -1.47
RET3	YPL010W	VAN1	P23642	535 aa		5.88	□□□□□ -1.47
RET3	YPL010W	KAP122	P32767	1081 aa		5.88	□□□□□ -1.47
RET3	YPL010W	YNR014W	P53719	212 aa		5.88	□□□□□ -1.47
RET3	YPL010W	BOI2	P39969	1040 aa		5.87	□□□□□ -1.47
RET3	YPL010W	YNR029C	P53729	429 aa	Known RBP	5.86	□□□□□ -1.47
RET3	YPL010W	ENT1	Q12518	454 aa		5.86	□□□□□ -1.47
RET3	YPL010W	NUP188	P52593	1655 aa	Known RBP	5.85	□□□□□ -1.47
RET3	YPL010W	PDR5	P33302	1511 aa	Known RBP	5.85	□□□□□ -1.47
RET3	YPL010W	PDR11	P40550	1411 aa		5.85	□□□□□ -1.47
RET3	YPL010W	RPC31	P17890	251 aa		5.85	□□□□□ -1.47
RET3	YPL010W	MTO1	P53070	669 aa		5.85	□□□□□ -1.47
RET3	YPL010W	TRS33	Q99394	268 aa		5.85	□□□□□ -1.47
RET3	YPL010W	KRE5	P22023	1365 aa		5.84	□□□□□ -1.47
RET3	YPL010W	YCK2	P23292	546 aa	Known RBP	5.84	□□□□□ -1.47
RET3	YPL010W	NCL1	P38205	684 aa	Known RBP	5.84	□□□□□ -1.47
RET3	YPL010W	CWH41	P53008	833 aa		5.84	□□□□□ -1.47
RET3	YPL010W	CUS1	Q02554	436 aa	Predicted RBP	5.84	□□□□□ -1.47
RET3	YPL010W	CFT1	Q06632	1357 aa	Known RBP	5.83	□□□□□ -1.48
RET3	YPL010W	APM2	P38700	605 aa		5.83	□□□□□ -1.48
RET3	YPL010W	PRK1	P40494	810 aa		5.83	□□□□□ -1.48
RET3	YPL010W	YDR215C	Q12240	137 aa		5.83	□□□□□ -1.48
RET3	YPL010W	SUV3	P32580	737 aa		5.82	□□□□□ -1.48
RET3	YPL010W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	5.82	□□□□□ -1.48	not detected
RET3	YPL010W	ECM23	Q02710	187 aa		5.82	□□□□□ -1.48
RET3	YPL010W	CAB1	Q04430	367 aa		5.81	□□□□□ -1.48
RET3	YPL010W	BCK1	Q01389	1478 aa		5.81	□□□□□ -1.48
RET3	YPL010W	PUF6	Q04373	656 aa	Known RBP	5.8	□□□□□ -1.48
RET3	YPL010W	IMH1	Q06704	911 aa	Known RBP	5.8	□□□□□ -1.48
RET3	YPL010W	NHA1	Q99271	985 aa		5.8	□□□□□ -1.48
RET3	YPL010W	MRPL33	P20084	86 aa		5.79	□□□□□ -1.48
RET3	YPL010W	PUP1	P25043	261 aa		5.79	□□□□□ -1.48
RET3	YPL010W	TPS3	P38426	1054 aa	Known RBP	5.79	□□□□□ -1.48
RET3	YPL010W	QDR2	P40474	542 aa		5.79	□□□□□ -1.48
RET3	YPL010W	YNR040W	P53736	256 aa		5.79	□□□□□ -1.48
RET3	YPL010W	UBX7	P38349	436 aa		5.78	□□□□□ -1.48
RET3	YPL010W	YER156C	P40093	338 aa	Known RBP	5.78	□□□□□ -1.48
RET3	YPL010W	VMA3	P25515	160 aa		5.77	□□□□□ -1.49
RET3	YPL010W	CPS1	P27614	576 aa		5.77	□□□□□ -1.49
RET3	YPL010W	YBR197C	P38306	217 aa		5.77	□□□□□ -1.49
RET3	YPL010W	PAF1	P38351	445 aa		5.77	□□□□□ -1.49
RET3	YPL010W	SLN1	P39928	1220 aa	Predicted RBP	5.77	□□□□□ -1.49
RET3	YPL010W	GIS4	Q04233	774 aa		5.77	□□□□□ -1.49
RET3	YPL010W	YOR296W	Q08748	1289 aa		5.77	□□□□□ -1.49
RET3	YPL010W	NAR1	P23503	491 aa	Known RBP	5.76	□□□□□ -1.49
RET3	YPL010W	PGM2	P37012	569 aa	Known RBP	5.76	□□□□□ -1.49
RET3	YPL010W	DYS1	P38791	387 aa		5.76	□□□□□ -1.49
RET3	YPL010W	ALD4	P46367	519 aa	Known RBP	5.76	□□□□□ -1.49
RET3	YPL010W	ITC1	P53125	1264 aa		5.76	□□□□□ -1.49
RET3	YPL010W	NAP1	P25293	417 aa	Known RBP	5.75	□□□□□ -1.49
RET3	YPL010W	ALG14	P38242	237 aa		5.75	□□□□□ -1.49
RET3	YPL010W	AMN1	P38285	549 aa	Predicted RBP	5.75	□□□□□ -1.49
RET3	YPL010W	BUD9	P53226	547 aa		5.75	□□□□□ -1.49
RET3	YPL010W	SRS2	P12954	1174 aa		5.74	□□□□□ -1.49
RET3	YPL010W	IDI1	P15496	288 aa		5.74	□□□□□ -1.49
RET3	YPL010W	PRP45	P28004	379 aa	Predicted RBP	5.74	□□□□□ -1.49
RET3	YPL010W	TAT1	P38085	619 aa		5.74	□□□□□ -1.49
RET3	YPL010W	SLP1	Q12232	587 aa		5.74	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms