RNA–Protein interactions for RNA: YPL008W

CHL1, Transcript of Probable DNA helicase, yeastyeast

Gene CHL1, Length 2,586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHL1YPL008W SWI1P09547 1314 aa4.72□□□□□ -1.65
CHL1YPL008W VAS1P07806 1104 aaKnown RBP4.72□□□□□ -1.65
CHL1YPL008W SRS2P12954 1174 aa4.72□□□□□ -1.65
CHL1YPL008W MET1P36150 593 aa4.72□□□□□ -1.65
CHL1YPL008W UBP12P39538 1254 aa4.72□□□□□ -1.65
CHL1YPL008W BDP1P46678 594 aa4.72□□□□□ -1.65
CHL1YPL008W ACS2P52910 683 aaKnown RBP4.72□□□□□ -1.65
CHL1YPL008W MLC1P53141 149 aa4.72□□□□□ -1.65
CHL1YPL008W OYE2Q03558 400 aaKnown RBP4.72□□□□□ -1.65
CHL1YPL008W MTC5Q03897 1148 aa4.72□□□□□ -1.65
CHL1YPL008W CSC1Q06538 782 aa4.72□□□□□ -1.65
CHL1YPL008W BRE1Q07457 700 aaKnown RBP4.72□□□□□ -1.65
CHL1YPL008W BOI1P38041 980 aaKnown RBP4.71□□□□□ -1.65
CHL1YPL008W CIT2P08679 460 aa4.71□□□□□ -1.66
CHL1YPL008W DCW1P36091 449 aa4.71□□□□□ -1.66
CHL1YPL008W BUD6P41697 788 aa4.71□□□□□ -1.66
CHL1YPL008W SLY41P22215 453 aa4.7□□□□□ -1.66
CHL1YPL008W MSP1P28737 362 aa4.7□□□□□ -1.66
CHL1YPL008W GRS1P38088 690 aaKnown RBP4.7□□□□□ -1.66
CHL1YPL008W TUM1Q08686 304 aaKnown RBP4.7□□□□□ -1.66
CHL1YPL008W SEC20P28791 383 aa4.7□□□□□ -1.66
CHL1YPL008W ECM21P38167 1117 aaKnown RBP4.7□□□□□ -1.66
CHL1YPL008W OSH3P38713 996 aaKnown RBP4.7□□□□□ -1.66
CHL1YPL008W MTO1P53070 669 aa4.7□□□□□ -1.66
CHL1YPL008W NAF1P53919 492 aaKnown RBP4.7□□□□□ -1.66
CHL1YPL008W YAF9P53930 226 aa4.7□□□□□ -1.66
CHL1YPL008W FRK1Q03002 865 aaPredicted RBP4.7□□□□□ -1.66
CHL1YPL008W PDR18P53756 1333 aa4.7□□□□□ -1.66
CHL1YPL008W TOP1P04786 769 aa4.69□□□□□ -1.66
CHL1YPL008W LPD1P09624 499 aaKnown RBP4.69□□□□□ -1.66
CHL1YPL008W CAB3P36076 571 aa4.69□□□□□ -1.66
CHL1YPL008W EMP47P43555 445 aa4.69□□□□□ -1.66
CHL1YPL008W ATG1P53104 897 aa4.69□□□□□ -1.66
CHL1YPL008W RNH70P53331 553 aa4.69□□□□□ -1.66
CHL1YPL008W TUB4P53378 473 aa4.69□□□□□ -1.66
CHL1YPL008W KAR5Q04746 504 aa4.69□□□□□ -1.66
CHL1YPL008W SPR28Q04921 423 aa4.69□□□□□ -1.66
CHL1YPL008W FPR4Q06205 392 aaPredicted RBP4.69□□□□□ -1.66
CHL1YPL008W YOL036WQ08206 761 aa4.69□□□□□ -1.66
CHL1YPL008W YRF1-3P0CX14 1859 aa4.69□□□□□ -1.66
CHL1YPL008W YRF1-7P0CX15 1859 aa4.69□□□□□ -1.66
CHL1YPL008W YRF1-6P53819 1859 aa4.69□□□□□ -1.66
CHL1YPL008W SPO22P40511 975 aa4.69□□□□□ -1.66
CHL1YPL008W RPS0BP46654 252 aaKnown RBP4.69□□□□□ -1.66
CHL1YPL008W SSK22P25390 1331 aaPredicted RBP4.69□□□□□ -1.66
CHL1YPL008W PRP40P33203 583 aaKnown RBP4.68□□□□□ -1.66
CHL1YPL008W BDH2P39713 417 aa4.68□□□□□ -1.66
CHL1YPL008W HYR1P40581 163 aaKnown RBP4.68□□□□□ -1.66
CHL1YPL008W YGR122WP53272 402 aa4.68□□□□□ -1.66
CHL1YPL008W HAP5Q02516 242 aa4.68□□□□□ -1.66
CHL1YPL008W VPS64Q03944 604 aa4.68□□□□□ -1.66
CHL1YPL008W SAC3P46674 1301 aa4.68□□□□□ -1.66
CHL1YPL008W NOT3P06102 836 aaKnown RBP4.68□□□□□ -1.66
CHL1YPL008W YGL242CP53066 181 aa4.68□□□□□ -1.66
CHL1YPL008W PKH1Q03407 766 aa4.68□□□□□ -1.66
CHL1YPL008W PNP1Q05788 311 aa4.68□□□□□ -1.66
CHL1YPL008W YOL098CQ12496 1037 aa4.68□□□□□ -1.66
CHL1YPL008W SEC2P17065 759 aa4.67□□□□□ -1.66
CHL1YPL008W SWC3P31376 625 aa4.67□□□□□ -1.66
CHL1YPL008W ARL1P38116 183 aaKnown RBP4.67□□□□□ -1.66
CHL1YPL008W HAL5P38970 855 aaKnown RBP4.67□□□□□ -1.66
CHL1YPL008W HST1P53685 503 aa4.67□□□□□ -1.66
CHL1YPL008W ZDS2P54786 942 aa4.67□□□□□ -1.66
CHL1YPL008W ETT1Q08421 412 aaKnown RBP4.67□□□□□ -1.66
CHL1YPL008W PSH1Q12161 406 aa4.67□□□□□ -1.66
CHL1YPL008W KEX2P13134 814 aa4.67□□□□□ -1.66
CHL1YPL008W ASF1P32447 279 aa4.67□□□□□ -1.66
CHL1YPL008W JSN1P47135 1091 aaKnown RBP RIP-Chip data4.67□□□□□ -1.66not detected
CHL1YPL008W PIL1P53252 339 aaKnown RBP4.67□□□□□ -1.66
CHL1YPL008W YNL115CP53925 644 aa4.67□□□□□ -1.66
CHL1YPL008W TFB4Q12004 338 aa4.67□□□□□ -1.66
CHL1YPL008W SSF2Q12153 453 aaPredicted RBP4.67□□□□□ -1.66
CHL1YPL008W SNU66Q12420 587 aaPredicted RBP4.67□□□□□ -1.66
CHL1YPL008W TY1A-DR4O74302 440 aa4.66□□□□□ -1.66
CHL1YPL008W COBP00163 385 aa4.66□□□□□ -1.66
CHL1YPL008W TY1A-HP0C2I4 478 aaKnown RBP4.66□□□□□ -1.66
CHL1YPL008W TY1A-AP0CX57 440 aa4.66□□□□□ -1.66
CHL1YPL008W TY1A-PR1P0CX58 440 aa4.66□□□□□ -1.66
CHL1YPL008W TY1A-ORP0CX59 440 aa4.66□□□□□ -1.66
CHL1YPL008W TY1A-PR2P0CX60 440 aa4.66□□□□□ -1.66
CHL1YPL008W TY1A-DR5P0CX65 440 aa4.66□□□□□ -1.66
CHL1YPL008W TY1A-ER2P0CX66 440 aa4.66□□□□□ -1.66
CHL1YPL008W TY1A-GR3P0CX67 440 aa4.66□□□□□ -1.66
CHL1YPL008W TY1A-LR1P0CX68 440 aa4.66□□□□□ -1.66
CHL1YPL008W TY1A-MR2P0CX69 440 aa4.66□□□□□ -1.66
CHL1YPL008W QDR1P40475 563 aa4.66□□□□□ -1.66
CHL1YPL008W TY1A-JR2P47099 440 aa4.66□□□□□ -1.66
CHL1YPL008W TY1A-DR1Q03856 440 aa4.66□□□□□ -1.66
CHL1YPL008W TY1A-ML1Q04706 440 aaKnown RBP4.66□□□□□ -1.66
CHL1YPL008W DIB1Q06819 143 aaPredicted RBP4.66□□□□□ -1.66
CHL1YPL008W FRA1Q07825 749 aa4.66□□□□□ -1.66
CHL1YPL008W TY1A-BRQ12217 440 aa4.66□□□□□ -1.66
CHL1YPL008W TY1A-NL2Q12470 440 aa4.66□□□□□ -1.66
CHL1YPL008W TY1A-GR2Q12485 440 aa4.66□□□□□ -1.66
CHL1YPL008W PIF1P07271 859 aa4.66□□□□□ -1.66
CHL1YPL008W BIK1P11709 440 aa4.66□□□□□ -1.66
CHL1YPL008W VAC8P39968 578 aa4.66□□□□□ -1.66
CHL1YPL008W YJL181WP46987 611 aa4.66□□□□□ -1.66
CHL1YPL008W PSK2Q08217 1101 aa4.66□□□□□ -1.66
CHL1YPL008W RIM20Q12033 661 aa4.66□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms