RNA–Protein interactions for RNA: YNL040W

YNL040W, Transcript of Putative protein of unknown function, yeastyeast

Gene YNL040W, Length 1,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YNL040WYNL040W VMA3P25515 160 aa8.66□□□□□ -1.02
YNL040WYNL040W LTV1P34078 463 aa8.66□□□□□ -1.02
YNL040WYNL040W SIC1P38634 284 aa8.66□□□□□ -1.02
YNL040WYNL040W DSN1P40568 576 aa8.66□□□□□ -1.02
YNL040WYNL040W ALD2P47771 506 aa8.66□□□□□ -1.02
YNL040WYNL040W NSG2P53898 299 aa8.66□□□□□ -1.02
YNL040WYNL040W KRE33P53914 1056 aaKnown RBP8.66□□□□□ -1.02
YNL040WYNL040W NOP8Q08287 484 aaPredicted RBP8.66□□□□□ -1.02
YNL040WYNL040W YDR461C-AQ2V2P7 80 aa8.66□□□□□ -1.02
YNL040WYNL040W AI1P03875 834 aa8.65□□□□□ -1.02
YNL040WYNL040W LEU1P07264 779 aaKnown RBP8.65□□□□□ -1.02
YNL040WYNL040W MSH3P25336 1018 aa8.65□□□□□ -1.02
YNL040WYNL040W CBF5P33322 483 aaKnown RBP RIP-Chip data8.65□□□□□ -1.02not detected
YNL040WYNL040W QDR1P40475 563 aa8.65□□□□□ -1.02
YNL040WYNL040W DJP1P40564 432 aa8.65□□□□□ -1.02
YNL040WYNL040W APC11Q12157 165 aa8.65□□□□□ -1.02
YNL040WYNL040W SRP54P20424 541 aaKnown RBP8.64□□□□□ -1.03
YNL040WYNL040W GRS1P38088 690 aaKnown RBP8.64□□□□□ -1.03
YNL040WYNL040W QDR2P40474 542 aa8.64□□□□□ -1.03
YNL040WYNL040W YFL066CP43538 392 aa8.64□□□□□ -1.03
YNL040WYNL040W ARL1P38116 183 aaKnown RBP8.63□□□□□ -1.03
YNL040WYNL040W MDJ2P42834 146 aa8.63□□□□□ -1.03
YNL040WYNL040W MTO1P53070 669 aa8.63□□□□□ -1.03
YNL040WYNL040W ADE12P80210 433 aaKnown RBP8.63□□□□□ -1.03
YNL040WYNL040W THI72Q08579 599 aa8.63□□□□□ -1.03
YNL040WYNL040W SPT6P23615 1451 aaKnown RBP8.63□□□□□ -1.03
YNL040WYNL040W MLP2P40457 1679 aa8.63□□□□□ -1.03
YNL040WYNL040W RPB10P22139 70 aa8.62□□□□□ -1.03
YNL040WYNL040W KAP122P32767 1081 aa8.62□□□□□ -1.03
YNL040WYNL040W KTR2P33550 425 aa8.62□□□□□ -1.03
YNL040WYNL040W TCD1P38756 429 aa8.62□□□□□ -1.03
YNL040WYNL040W TPM2P40414 161 aa8.62□□□□□ -1.03
YNL040WYNL040W ETT1Q08421 412 aaKnown RBP8.62□□□□□ -1.03
YNL040WYNL040W POL1P13382 1468 aa8.61□□□□□ -1.03
YNL040WYNL040W SCC2Q04002 1493 aa8.61□□□□□ -1.03
YNL040WYNL040W LSB3P43603 459 aaKnown RBP8.61□□□□□ -1.03
YNL040WYNL040W ACF4P47129 309 aa8.61□□□□□ -1.03
YNL040WYNL040W DOS2P54858 310 aa8.61□□□□□ -1.03
YNL040WYNL040W RLP24Q07915 199 aaKnown RBP8.61□□□□□ -1.03
YNL040WYNL040W CDC45Q08032 650 aa8.61□□□□□ -1.03
YNL040WYNL040W LSP1Q12230 341 aaKnown RBP8.61□□□□□ -1.03
YNL040WYNL040W SWR1Q05471 1514 aa8.6□□□□□ -1.03
YNL040WYNL040W RPP0P05317 312 aaKnown RBP8.6□□□□□ -1.03
YNL040WYNL040W KNS1P32350 737 aaPredicted RBP8.6□□□□□ -1.03
YNL040WYNL040W RPS0AP32905 252 aaKnown RBP8.6□□□□□ -1.03
YNL040WYNL040W SWE1P32944 819 aa8.6□□□□□ -1.03
YNL040WYNL040W LDH1P38139 375 aa8.6□□□□□ -1.03
YNL040WYNL040W DYS1P38791 387 aa8.6□□□□□ -1.03
YNL040WYNL040W SUT1P53032 299 aaKnown RBP8.6□□□□□ -1.03
YNL040WYNL040W RGP1P16664 663 aa8.59□□□□□ -1.03
YNL040WYNL040W CIN4P39110 191 aa8.59□□□□□ -1.03
YNL040WYNL040W VPS60Q03390 229 aa8.59□□□□□ -1.03
YNL040WYNL040W TY1B-DR4Q07793 1604 aa8.59□□□□□ -1.04
YNL040WYNL040W TRM3Q07527 1436 aa8.58□□□□□ -1.04
YNL040WYNL040W SWI3P32591 825 aa8.58□□□□□ -1.04
YNL040WYNL040W MRPL16P38064 232 aa8.58□□□□□ -1.04
YNL040WYNL040W MED8P38304 223 aa8.58□□□□□ -1.04
YNL040WYNL040W RNT1Q02555 471 aa8.58□□□□□ -1.04
YNL040WYNL040W IOC4Q04213 475 aa8.58□□□□□ -1.04
YNL040WYNL040W YSH1Q06224 779 aaPredicted RBP8.58□□□□□ -1.04
YNL040WYNL040W STB3Q12427 513 aa8.58□□□□□ -1.04
YNL040WYNL040W DNA2P38859 1522 aa8.57□□□□□ -1.04
YNL040WYNL040W GEA1P47102 1408 aaPredicted RBP8.57□□□□□ -1.04
YNL040WYNL040W STM1P39015 273 aaKnown RBP8.57□□□□□ -1.04
YNL040WYNL040W HXT8P40886 569 aa8.57□□□□□ -1.04
YNL040WYNL040W SPR3P41901 512 aa8.57□□□□□ -1.04
YNL040WYNL040W SEN54Q02825 467 aaPredicted RBP8.57□□□□□ -1.04
YNL040WYNL040W ESC2Q06340 456 aa8.57□□□□□ -1.04
YNL040WYNL040W BMS1Q08965 1183 aaKnown RBP8.57□□□□□ -1.04
YNL040WYNL040W NOP14Q99207 810 aaKnown RBP8.57□□□□□ -1.04
YNL040WYNL040W PET111P08468 800 aa8.56□□□□□ -1.04
YNL040WYNL040W SLD2P34252 453 aa8.56□□□□□ -1.04
YNL040WYNL040W ECM1P39715 212 aa8.56□□□□□ -1.04
YNL040WYNL040W GRX3Q03835 250 aa8.56□□□□□ -1.04
YNL040WYNL040W RPN7Q06103 429 aaKnown RBP8.56□□□□□ -1.04
YNL040WYNL040W CLB1P24868 471 aa8.55□□□□□ -1.04
YNL040WYNL040W DEP1P31385 405 aa8.55□□□□□ -1.04
YNL040WYNL040W YHL050CP38721 697 aa8.55□□□□□ -1.04
YNL040WYNL040W YHR219WP38900 624 aa8.55□□□□□ -1.04
YNL040WYNL040W VPS27P40343 622 aaKnown RBP8.55□□□□□ -1.04
YNL040WYNL040W SKP1P52286 194 aa8.55□□□□□ -1.04
YNL040WYNL040W CUS1Q02554 436 aaPredicted RBP8.55□□□□□ -1.04
YNL040WYNL040W MSN1P22148 382 aa8.54□□□□□ -1.04
YNL040WYNL040W NAB2P32505 525 aaKnown RBP RIP-Chip data8.54□□□□□ -1.04not detected
YNL040WYNL040W BSD2P38356 321 aa8.54□□□□□ -1.04
YNL040WYNL040W NUT2Q06213 157 aa8.54□□□□□ -1.04
YNL040WYNL040W FRT1Q99332 602 aa8.54□□□□□ -1.04
YNL040WYNL040W RAD9P14737 1309 aa8.54□□□□□ -1.04
YNL040WYNL040W REV3P14284 1504 aa8.54□□□□□ -1.04
YNL040WYNL040W RAD2P07276 1031 aa8.53□□□□□ -1.04
YNL040WYNL040W FPS1P23900 669 aa8.53□□□□□ -1.04
YNL040WYNL040W SBE2P42223 864 aaKnown RBP8.53□□□□□ -1.04
YNL040WYNL040W VPS72Q03388 795 aa8.53□□□□□ -1.04
YNL040WYNL040W YOR296WQ08748 1289 aa8.53□□□□□ -1.04
YNL040WYNL040W TSC11P40061 1430 aa8.53□□□□□ -1.04
YNL040WYNL040W SIN3P22579 1536 aa8.53□□□□□ -1.04
YNL040WYNL040W GIP1P38229 639 aa8.52□□□□□ -1.05
YNL040WYNL040W KIP3P53086 805 aaKnown RBP8.52□□□□□ -1.05
YNL040WYNL040W TRS120Q04183 1289 aa8.52□□□□□ -1.05
YNL040WYNL040W ECM16Q04217 1267 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 33 ms