RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C TY4B-PA0A0B7P3V8 1104 aa5.34□□□□□ -1.55
UBX4YMR067C TED1P40533 473 aa5.34□□□□□ -1.55
UBX4YMR067C LSB6P42951 607 aa5.34□□□□□ -1.55
UBX4YMR067C ARI1P53111 347 aaKnown RBP5.34□□□□□ -1.55
UBX4YMR067C DSE4P53753 1117 aa5.34□□□□□ -1.55
UBX4YMR067C YPL034WQ03083 165 aa5.34□□□□□ -1.55
UBX4YMR067C MCA1Q08601 432 aa5.34□□□□□ -1.55
UBX4YMR067C TY4A-HQ6Q5P6 413 aa5.34□□□□□ -1.55
UBX4YMR067C SBP1P10080 294 aaKnown RBP5.33□□□□□ -1.56
UBX4YMR067C TFA2P36145 328 aa5.33□□□□□ -1.56
UBX4YMR067C PGM1P33401 570 aaKnown RBP5.32□□□□□ -1.56
UBX4YMR067C TRS120Q04183 1289 aa5.32□□□□□ -1.56
UBX4YMR067C HVG1P0CE11 249 aa5.31□□□□□ -1.56
UBX4YMR067C RSC6P25632 483 aa5.31□□□□□ -1.56
UBX4YMR067C PYC2P32327 1180 aaKnown RBP5.31□□□□□ -1.56
UBX4YMR067C PAN5P38787 379 aa5.31□□□□□ -1.56
UBX4YMR067C RSC4Q02206 625 aa5.31□□□□□ -1.56
UBX4YMR067C TAF7Q05021 590 aa5.31□□□□□ -1.56
UBX4YMR067C TRL1P09880 827 aaKnown RBP5.3□□□□□ -1.56
UBX4YMR067C SPO71Q03868 1245 aa5.3□□□□□ -1.56
UBX4YMR067C GAS5Q08193 484 aa5.3□□□□□ -1.56
UBX4YMR067C GLO4Q12320 285 aa5.3□□□□□ -1.56
UBX4YMR067C TY1A-NL1Q12391 440 aaKnown RBP5.3□□□□□ -1.56
UBX4YMR067C YJR124CP47159 448 aa5.29□□□□□ -1.56
UBX4YMR067C POL5P39985 1022 aaKnown RBP5.28□□□□□ -1.56
UBX4YMR067C FET4P40988 552 aa5.28□□□□□ -1.56
UBX4YMR067C YNR065CP53751 1116 aa5.28□□□□□ -1.56
UBX4YMR067C CDC55Q00362 526 aa5.28□□□□□ -1.56
UBX4YMR067C YBL113CQ7M4S9 792 aa5.28□□□□□ -1.56
UBX4YMR067C COQ2P32378 372 aa5.27□□□□□ -1.57
UBX4YMR067C MAE1P36013 669 aaKnown RBP5.27□□□□□ -1.57
UBX4YMR067C GRS1P38088 690 aaKnown RBP5.27□□□□□ -1.57
UBX4YMR067C ERP5P38819 212 aa5.27□□□□□ -1.57
UBX4YMR067C YNL011CP53980 444 aa5.27□□□□□ -1.57
UBX4YMR067C CTR9P89105 1077 aa5.27□□□□□ -1.57
UBX4YMR067C MSH6Q03834 1242 aa5.27□□□□□ -1.57
UBX4YMR067C BSC2Q05611 235 aa5.27□□□□□ -1.57
UBX4YMR067C HAT1Q12341 374 aa5.27□□□□□ -1.57
UBX4YMR067C ECM2P38241 364 aaKnown RBP5.26□□□□□ -1.57
UBX4YMR067C NEO1P40527 1151 aa5.26□□□□□ -1.57
UBX4YMR067C HAS1Q03532 505 aaKnown RBP5.26□□□□□ -1.57
UBX4YMR067C ELG1Q12050 791 aa5.26□□□□□ -1.57
UBX4YMR067C MNL2Q12205 849 aa5.26□□□□□ -1.57
UBX4YMR067C MDJ2P42834 146 aa5.25□□□□□ -1.57
UBX4YMR067C FAR11P53917 953 aa5.25□□□□□ -1.57
UBX4YMR067C REC8Q12188 680 aa5.25□□□□□ -1.57
UBX4YMR067C GLT1Q12680 2145 aaKnown RBP5.24□□□□□ -1.57
UBX4YMR067C SAF1P38352 637 aa5.24□□□□□ -1.57
UBX4YMR067C RIM11P38615 370 aa5.24□□□□□ -1.57
UBX4YMR067C COBP00163 385 aa5.23□□□□□ -1.57
UBX4YMR067C PRP5P21372 849 aaPredicted RBP5.23□□□□□ -1.57
UBX4YMR067C SAP155P43612 1002 aa5.23□□□□□ -1.57
UBX4YMR067C GCV1P48015 400 aa5.23□□□□□ -1.57
UBX4YMR067C NUT2Q06213 157 aa5.23□□□□□ -1.57
UBX4YMR067C YIG1Q08956 461 aa5.23□□□□□ -1.57
UBX4YMR067C CMR1Q12510 522 aaKnown RBP5.23□□□□□ -1.57
UBX4YMR067C FRT1Q99332 602 aa5.23□□□□□ -1.57
UBX4YMR067C FLP1P03870 423 aa5.22□□□□□ -1.57
UBX4YMR067C NPR1P22211 790 aa5.22□□□□□ -1.57
UBX4YMR067C KAE1P36132 386 aa5.22□□□□□ -1.57
UBX4YMR067C YHL008CP38750 627 aa5.22□□□□□ -1.57
UBX4YMR067C SSF1P38789 453 aaPredicted RBP5.22□□□□□ -1.57
UBX4YMR067C NCE103P53615 221 aa5.22□□□□□ -1.57
UBX4YMR067C NRD1P53617 575 aaKnown RBP RIP-Chip data5.22□□□□□ -1.57not detected
UBX4YMR067C YLL054CQ12244 843 aa5.22□□□□□ -1.57
UBX4YMR067C YLR122CQ12312 125 aa5.22□□□□□ -1.57
UBX4YMR067C SAM37P50110 327 aa5.21□□□□□ -1.58
UBX4YMR067C PMT7Q06644 662 aa5.21□□□□□ -1.58
UBX4YMR067C CHS2P14180 963 aa5.2□□□□□ -1.58
UBX4YMR067C ERS1P17261 260 aa5.2□□□□□ -1.58
UBX4YMR067C CIC1P38779 376 aaKnown RBP5.2□□□□□ -1.58
UBX4YMR067C PUF3Q07807 879 aaKnown RBP RIP-Chip data5.2□□□□□ -1.58not detected
UBX4YMR067C YOR223WQ12015 292 aa5.2□□□□□ -1.58
UBX4YMR067C MAC1P35192 417 aa5.19□□□□□ -1.58
UBX4YMR067C AKR1P39010 764 aa5.19□□□□□ -1.58
UBX4YMR067C STM1P39015 273 aaKnown RBP5.19□□□□□ -1.58
UBX4YMR067C NOC3Q07896 663 aaPredicted RBP5.19□□□□□ -1.58
UBX4YMR067C MED7Q08278 222 aa5.19□□□□□ -1.58
UBX4YMR067C HTS1P07263 546 aaKnown RBP5.18□□□□□ -1.58
UBX4YMR067C DUR3P33413 735 aa5.18□□□□□ -1.58
UBX4YMR067C PPX1P38698 397 aa5.18□□□□□ -1.58
UBX4YMR067C YHL050CP38721 697 aa5.18□□□□□ -1.58
UBX4YMR067C YHR219WP38900 624 aa5.18□□□□□ -1.58
UBX4YMR067C INP52P50942 1183 aa5.18□□□□□ -1.58
UBX4YMR067C KIP3P53086 805 aaKnown RBP5.18□□□□□ -1.58
UBX4YMR067C NUT1P53114 1132 aa5.18□□□□□ -1.58
UBX4YMR067C ALO1P54783 526 aaKnown RBP5.18□□□□□ -1.58
UBX4YMR067C YMR074CQ04773 145 aa5.18□□□□□ -1.58
UBX4YMR067C GPI13Q07830 1017 aa5.18□□□□□ -1.58
UBX4YMR067C INP54Q08227 384 aaKnown RBP5.18□□□□□ -1.58
UBX4YMR067C MSB1P21339 1137 aaKnown RBP5.17□□□□□ -1.58
UBX4YMR067C GCD6P32501 712 aaKnown RBP5.17□□□□□ -1.58
UBX4YMR067C OMA1P36163 345 aa5.17□□□□□ -1.58
UBX4YMR067C ARL1P38116 183 aaKnown RBP5.17□□□□□ -1.58
UBX4YMR067C YAF9P53930 226 aa5.17□□□□□ -1.58
UBX4YMR067C NAM7P30771 971 aaKnown RBP5.16□□□□□ -1.58
UBX4YMR067C YKR073CP36153 106 aa5.16□□□□□ -1.58
UBX4YMR067C RVS167P39743 482 aaKnown RBP5.16□□□□□ -1.58
UBX4YMR067C SPO74P45819 413 aa5.16□□□□□ -1.58
UBX4YMR067C UTP22P53254 1237 aaPredicted RBP5.16□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms