RNA–Protein interactions for RNA: YMR039C

SUB1, Transcript of Transcriptional coactivator, yeastyeast

Gene SUB1, Length 879 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB1YMR039C RSC4Q02206 625 aa6.39□□□□□ -1.39
SUB1YMR039C TRS120Q04183 1289 aa6.39□□□□□ -1.39
SUB1YMR039C HAT1Q12341 374 aa6.39□□□□□ -1.39
SUB1YMR039C TY4B-PA0A0B7P3V8 1104 aa6.38□□□□□ -1.39
SUB1YMR039C AI3P03877 415 aa6.38□□□□□ -1.39
SUB1YMR039C SFA1P32771 386 aa6.38□□□□□ -1.39
SUB1YMR039C TED1P40533 473 aa6.38□□□□□ -1.39
SUB1YMR039C TY4A-HQ6Q5P6 413 aa6.38□□□□□ -1.39
SUB1YMR039C YBL113CQ7M4S9 792 aa6.38□□□□□ -1.39
SUB1YMR039C MDJ2P42834 146 aa6.37□□□□□ -1.39
SUB1YMR039C MCA1Q08601 432 aa6.37□□□□□ -1.39
SUB1YMR039C PYC2P32327 1180 aaKnown RBP6.36□□□□□ -1.39
SUB1YMR039C GRS1P38088 690 aaKnown RBP6.36□□□□□ -1.39
SUB1YMR039C AMN1P38285 549 aaPredicted RBP6.36□□□□□ -1.39
SUB1YMR039C MNL2Q12205 849 aa6.36□□□□□ -1.39
SUB1YMR039C HVG1P0CE11 249 aa6.35□□□□□ -1.39
SUB1YMR039C SAC7P17121 654 aa6.35□□□□□ -1.39
SUB1YMR039C DSE4P53753 1117 aa6.35□□□□□ -1.39
SUB1YMR039C GAS5Q08193 484 aa6.35□□□□□ -1.39
SUB1YMR039C PAN5P38787 379 aa6.34□□□□□ -1.39
SUB1YMR039C LSB6P42951 607 aa6.34□□□□□ -1.39
SUB1YMR039C ARI1P53111 347 aaKnown RBP6.34□□□□□ -1.39
SUB1YMR039C YNL011CP53980 444 aa6.34□□□□□ -1.39
SUB1YMR039C CTR9P89105 1077 aa6.34□□□□□ -1.39
SUB1YMR039C CDC55Q00362 526 aa6.34□□□□□ -1.39
SUB1YMR039C YPL034WQ03083 165 aa6.34□□□□□ -1.39
SUB1YMR039C GLO4Q12320 285 aa6.34□□□□□ -1.39
SUB1YMR039C YJR124CP47159 448 aa6.33□□□□□ -1.4
SUB1YMR039C YNR065CP53751 1116 aa6.33□□□□□ -1.4
SUB1YMR039C SPO71Q03868 1245 aa6.32□□□□□ -1.4
SUB1YMR039C NUT2Q06213 157 aa6.32□□□□□ -1.4
SUB1YMR039C TY1A-NL1Q12391 440 aaKnown RBP6.32□□□□□ -1.4
SUB1YMR039C FRT1Q99332 602 aa6.32□□□□□ -1.4
SUB1YMR039C COBP00163 385 aa6.31□□□□□ -1.4
SUB1YMR039C PGM1P33401 570 aaKnown RBP6.31□□□□□ -1.4
SUB1YMR039C SSF1P38789 453 aaPredicted RBP6.31□□□□□ -1.4
SUB1YMR039C POL5P39985 1022 aaKnown RBP6.31□□□□□ -1.4
SUB1YMR039C BSC2Q05611 235 aa6.31□□□□□ -1.4
SUB1YMR039C RSC6P25632 483 aa6.3□□□□□ -1.4
SUB1YMR039C NEO1P40527 1151 aa6.3□□□□□ -1.4
SUB1YMR039C FET4P40988 552 aa6.3□□□□□ -1.4
SUB1YMR039C HAS1Q03532 505 aaKnown RBP6.3□□□□□ -1.4
SUB1YMR039C MSH6Q03834 1242 aa6.3□□□□□ -1.4
SUB1YMR039C ECM2P38241 364 aaKnown RBP6.29□□□□□ -1.4
SUB1YMR039C RIM11P38615 370 aa6.29□□□□□ -1.4
SUB1YMR039C SBP1P10080 294 aaKnown RBP6.28□□□□□ -1.4
SUB1YMR039C MAE1P36013 669 aaKnown RBP6.28□□□□□ -1.4
SUB1YMR039C GPI13Q07830 1017 aa6.28□□□□□ -1.4
SUB1YMR039C FLP1P03870 423 aa6.27□□□□□ -1.41
SUB1YMR039C PRP5P21372 849 aaPredicted RBP6.27□□□□□ -1.41
SUB1YMR039C NPR1P22211 790 aa6.27□□□□□ -1.41
SUB1YMR039C DUR3P33413 735 aa6.27□□□□□ -1.41
SUB1YMR039C ELG1Q12050 791 aa6.27□□□□□ -1.41
SUB1YMR039C CMR1Q12510 522 aaKnown RBP6.27□□□□□ -1.41
SUB1YMR039C YHL050CP38721 697 aa6.26□□□□□ -1.41
SUB1YMR039C YHL008CP38750 627 aa6.26□□□□□ -1.41
SUB1YMR039C YHR219WP38900 624 aa6.26□□□□□ -1.41
SUB1YMR039C SAP155P43612 1002 aa6.26□□□□□ -1.41
SUB1YMR039C STM1P39015 273 aaKnown RBP6.25□□□□□ -1.41
SUB1YMR039C REC8Q12188 680 aa6.25□□□□□ -1.41
SUB1YMR039C GLT1Q12680 2145 aaKnown RBP6.25□□□□□ -1.41
SUB1YMR039C SAM37P50110 327 aa6.24□□□□□ -1.41
SUB1YMR039C NCE103P53615 221 aa6.24□□□□□ -1.41
SUB1YMR039C FAR11P53917 953 aa6.24□□□□□ -1.41
SUB1YMR039C NOC3Q07896 663 aaPredicted RBP6.24□□□□□ -1.41
SUB1YMR039C COQ2P32378 372 aa6.23□□□□□ -1.41
SUB1YMR039C PPX1P38698 397 aa6.23□□□□□ -1.41
SUB1YMR039C NUT1P53114 1132 aa6.23□□□□□ -1.41
SUB1YMR039C NRD1P53617 575 aaKnown RBP RIP-Chip data6.23□□□□□ -1.41 RIP-Chip
SUB1YMR039C PMT7Q06644 662 aa6.23□□□□□ -1.41
SUB1YMR039C INP54Q08227 384 aaKnown RBP6.23□□□□□ -1.41
SUB1YMR039C YIG1Q08956 461 aa6.23□□□□□ -1.41
SUB1YMR039C ERS1P17261 260 aa6.22□□□□□ -1.41
SUB1YMR039C GCV1P48015 400 aa6.22□□□□□ -1.41
SUB1YMR039C MSC6Q08818 692 aaKnown RBP6.22□□□□□ -1.41
SUB1YMR039C HTS1P07263 546 aaKnown RBP6.21□□□□□ -1.42
SUB1YMR039C SAF1P38352 637 aa6.21□□□□□ -1.42
SUB1YMR039C CIC1P38779 376 aaKnown RBP6.21□□□□□ -1.42
SUB1YMR039C YLL054CQ12244 843 aa6.21□□□□□ -1.42
SUB1YMR039C KIP3P53086 805 aaKnown RBP6.2□□□□□ -1.42
SUB1YMR039C YAF9P53930 226 aa6.2□□□□□ -1.42
SUB1YMR039C YLR122CQ12312 125 aa6.2□□□□□ -1.42
SUB1YMR039C PHO4P07270 312 aaKnown RBP6.19□□□□□ -1.42
SUB1YMR039C GCD6P32501 712 aaKnown RBP6.19□□□□□ -1.42
SUB1YMR039C KAE1P36132 386 aa6.19□□□□□ -1.42
SUB1YMR039C RVS167P39743 482 aaKnown RBP6.19□□□□□ -1.42
SUB1YMR039C YCS4Q06156 1176 aa6.19□□□□□ -1.42
SUB1YMR039C PUF3Q07807 879 aaKnown RBP RIP-Chip data6.19□□□□□ -1.42not detected
SUB1YMR039C YOR223WQ12015 292 aa6.19□□□□□ -1.42
SUB1YMR039C SEC20P28791 383 aa6.18□□□□□ -1.42
SUB1YMR039C NAM7P30771 971 aaKnown RBP6.18□□□□□ -1.42
SUB1YMR039C MET4P32389 672 aa6.18□□□□□ -1.42
SUB1YMR039C AKR1P39010 764 aa6.18□□□□□ -1.42
SUB1YMR039C MEC3Q02574 474 aa6.18□□□□□ -1.42
SUB1YMR039C CHS2P14180 963 aa6.17□□□□□ -1.42
SUB1YMR039C MCM5P29496 775 aaKnown RBP6.17□□□□□ -1.42
SUB1YMR039C VPS35P34110 944 aa6.17□□□□□ -1.42
SUB1YMR039C UTP22P53254 1237 aaPredicted RBP6.17□□□□□ -1.42
SUB1YMR039C YMR074CQ04773 145 aa6.17□□□□□ -1.42
SUB1YMR039C MON1P53129 644 aa6.16□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms