RNA–Protein interactions for RNA: YML041C

VPS71, Transcript of Nucleosome-binding component of the SWR1 complex, yeastyeast

Gene VPS71, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS71YML041C SAP155P43612 1002 aa6.25□□□□□ -1.41
VPS71YML041C MTO1P53070 669 aa6.25□□□□□ -1.41
VPS71YML041C ITC1P53125 1264 aa6.25□□□□□ -1.41
VPS71YML041C DOS2P54858 310 aa6.25□□□□□ -1.41
VPS71YML041C YLR346CQ06139 101 aa6.25□□□□□ -1.41
VPS71YML041C GLY1P37303 387 aaKnown RBP6.24□□□□□ -1.41
VPS71YML041C YBR287WP38355 427 aa6.24□□□□□ -1.41
VPS71YML041C TAT2P38967 592 aa6.24□□□□□ -1.41
VPS71YML041C PIC2P40035 300 aa6.24□□□□□ -1.41
VPS71YML041C LSC2P53312 427 aa6.24□□□□□ -1.41
VPS71YML041C CUS1Q02554 436 aaPredicted RBP6.24□□□□□ -1.41
VPS71YML041C SSF2Q12153 453 aaPredicted RBP6.24□□□□□ -1.41
VPS71YML041C MCD1Q12158 566 aa6.24□□□□□ -1.41
VPS71YML041C RGP1P16664 663 aa6.23□□□□□ -1.41
VPS71YML041C MCM5P29496 775 aaKnown RBP6.23□□□□□ -1.41
VPS71YML041C AHP1P38013 176 aaKnown RBP6.23□□□□□ -1.41
VPS71YML041C YHL008CP38750 627 aa6.23□□□□□ -1.41
VPS71YML041C AIM46P38885 310 aa6.23□□□□□ -1.41
VPS71YML041C ACO2P39533 789 aa6.23□□□□□ -1.41
VPS71YML041C MRPS18P42847 217 aa6.23□□□□□ -1.41
VPS71YML041C NUT1P53114 1132 aa6.23□□□□□ -1.41
VPS71YML041C YNR040WP53736 256 aa6.23□□□□□ -1.41
VPS71YML041C UGA4P32837 571 aa6.22□□□□□ -1.41
VPS71YML041C ULP1Q02724 621 aa6.22□□□□□ -1.41
VPS71YML041C ADI1Q03677 179 aa6.22□□□□□ -1.41
VPS71YML041C PRP5P21372 849 aaPredicted RBP6.21□□□□□ -1.42
VPS71YML041C PYC2P32327 1180 aaKnown RBP6.21□□□□□ -1.42
VPS71YML041C PET112P33893 541 aa6.21□□□□□ -1.42
VPS71YML041C RIM11P38615 370 aa6.21□□□□□ -1.42
VPS71YML041C YJL049WP47048 450 aa6.21□□□□□ -1.42
VPS71YML041C TY1A-BLQ12266 440 aa6.21□□□□□ -1.42
VPS71YML041C TCB1Q12466 1186 aa6.21□□□□□ -1.42
VPS71YML041C CDC19P00549 500 aaKnown RBP6.2□□□□□ -1.42
VPS71YML041C CDC34P14682 295 aa6.2□□□□□ -1.42
VPS71YML041C KAR2P16474 682 aaKnown RBP6.2□□□□□ -1.42
VPS71YML041C NMD2P38798 1089 aaKnown RBP6.2□□□□□ -1.42
VPS71YML041C SCW11P53189 542 aa6.2□□□□□ -1.42
VPS71YML041C YGR053CP53234 283 aa6.2□□□□□ -1.42
VPS71YML041C CAF120P53836 1060 aa6.2□□□□□ -1.42
VPS71YML041C APM2P38700 605 aa6.19□□□□□ -1.42
VPS71YML041C RVS167P39743 482 aaKnown RBP6.19□□□□□ -1.42
VPS71YML041C GNP1P48813 663 aa6.19□□□□□ -1.42
VPS71YML041C UBP15P50101 1230 aa6.19□□□□□ -1.42
VPS71YML041C UBP2Q01476 1272 aa6.19□□□□□ -1.42
VPS71YML041C NSE3Q05541 303 aa6.19□□□□□ -1.42
VPS71YML041C YER156CP40093 338 aaKnown RBP6.18□□□□□ -1.42
VPS71YML041C BUD6P41697 788 aa6.18□□□□□ -1.42
VPS71YML041C YAF9P53930 226 aa6.18□□□□□ -1.42
VPS71YML041C GCR1P07261 785 aa6.17□□□□□ -1.42
VPS71YML041C CIT2P08679 460 aa6.17□□□□□ -1.42
VPS71YML041C SPC42P36094 363 aa6.17□□□□□ -1.42
VPS71YML041C FAA4P47912 694 aaKnown RBP6.17□□□□□ -1.42
VPS71YML041C MON1P53129 644 aa6.17□□□□□ -1.42
VPS71YML041C RPN4Q03465 531 aa6.17□□□□□ -1.42
VPS71YML041C IOC4Q04213 475 aa6.17□□□□□ -1.42
VPS71YML041C BRN1P38170 754 aa6.16□□□□□ -1.42
VPS71YML041C YIR007WP40566 764 aa6.16□□□□□ -1.42
VPS71YML041C NOG1Q02892 647 aaKnown RBP6.16□□□□□ -1.42
VPS71YML041C WRS1Q12109 432 aaKnown RBP6.16□□□□□ -1.42
VPS71YML041C CMR1Q12510 522 aaKnown RBP6.16□□□□□ -1.42
VPS71YML041C HVG1P0CE11 249 aa6.15□□□□□ -1.42
VPS71YML041C HEM13P11353 328 aaKnown RBP6.15□□□□□ -1.42
VPS71YML041C RNH70P53331 553 aa6.15□□□□□ -1.42
VPS71YML041C PMT7Q06644 662 aa6.15□□□□□ -1.42
VPS71YML041C RTT10Q08924 1013 aa6.15□□□□□ -1.42
VPS71YML041C STI1P15705 589 aaKnown RBP RIP-Chip data6.14□□□□□ -1.43not detected
VPS71YML041C NPR1P22211 790 aa6.14□□□□□ -1.43
VPS71YML041C GRX1P25373 110 aaKnown RBP6.14□□□□□ -1.43
VPS71YML041C SRP40P32583 406 aaPredicted RBP6.14□□□□□ -1.43
VPS71YML041C AMN1P38285 549 aaPredicted RBP6.14□□□□□ -1.43
VPS71YML041C OSH7P38755 437 aa6.14□□□□□ -1.43
VPS71YML041C CWC24P53769 259 aa6.14□□□□□ -1.43
VPS71YML041C NAM8Q00539 523 aaKnown RBP6.14□□□□□ -1.43
VPS71YML041C EEB1Q02891 456 aa6.14□□□□□ -1.43
VPS71YML041C GDE1Q02979 1223 aa6.14□□□□□ -1.43
VPS71YML041C BDF2Q07442 638 aa6.14□□□□□ -1.43
VPS71YML041C GLO4Q12320 285 aa6.14□□□□□ -1.43
VPS71YML041C SEC23P15303 768 aaKnown RBP6.13□□□□□ -1.43
VPS71YML041C IDI1P15496 288 aa6.13□□□□□ -1.43
VPS71YML041C MRPL16P38064 232 aa6.13□□□□□ -1.43
VPS71YML041C RDH54P38086 958 aa6.13□□□□□ -1.43
VPS71YML041C YGL140CP53120 1219 aa6.13□□□□□ -1.43
VPS71YML041C OPI10Q08202 246 aa6.13□□□□□ -1.43
VPS71YML041C MSC7P38694 644 aa6.12□□□□□ -1.43
VPS71YML041C HXT13P39924 564 aa6.12□□□□□ -1.43
VPS71YML041C SPF1P39986 1215 aaKnown RBP6.12□□□□□ -1.43
VPS71YML041C HXT17P53631 564 aa6.12□□□□□ -1.43
VPS71YML041C HXT15P54854 567 aa6.12□□□□□ -1.43
VPS71YML041C PPM2Q08282 695 aa6.12□□□□□ -1.43
VPS71YML041C NCL1P38205 684 aaKnown RBP6.11□□□□□ -1.43
VPS71YML041C ECM2P38241 364 aaKnown RBP6.11□□□□□ -1.43
VPS71YML041C PEX28P38848 579 aa6.11□□□□□ -1.43
VPS71YML041C ROG3P43602 733 aa6.11□□□□□ -1.43
VPS71YML041C BIO5P53744 561 aaKnown RBP6.11□□□□□ -1.43
VPS71YML041C FUS1P11710 512 aa6.1□□□□□ -1.43
VPS71YML041C TAF13P11747 167 aa6.1□□□□□ -1.43
VPS71YML041C YKL091CP33324 310 aaKnown RBP6.1□□□□□ -1.43
VPS71YML041C YKL069WP36088 180 aa6.1□□□□□ -1.43
VPS71YML041C TFA2P36145 328 aa6.1□□□□□ -1.43
VPS71YML041C PPT1P53043 513 aa6.1□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 37.6 ms