RNA–Protein interactions for RNA: YLR220W

CCC1, Transcript of Vacuolar Fe2+/Mn2+ transporter, yeast

Gene CCC1, Length 969 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCC1	YLR220W	GSC2	P40989	1895 aa		18.22	■□□□□ 0.51
CCC1	YLR220W	YPL260W	Q08977	551 aa		18.21	■□□□□ 0.51
CCC1	YLR220W	NIT1	P40447	199 aa		18.2	■□□□□ 0.5
CCC1	YLR220W	KEL3	Q08979	651 aa	Predicted RBP	18.2	■□□□□ 0.5
CCC1	YLR220W	CHO2	P05374	869 aa	Known RBP	18.19	■□□□□ 0.5
CCC1	YLR220W	TRL1	P09880	827 aa	Known RBP	18.19	■□□□□ 0.5
CCC1	YLR220W	YHL050C	P38721	697 aa		18.19	■□□□□ 0.5
CCC1	YLR220W	CRG1	P38892	291 aa	RIP-Chip data	18.19	■□□□□ 0.5	not detected
CCC1	YLR220W	SLN1	P39928	1220 aa	Predicted RBP	18.18	■□□□□ 0.5
CCC1	YLR220W	RPS15	Q01855	142 aa	Known RBP	18.18	■□□□□ 0.5
CCC1	YLR220W	RAD53	P22216	821 aa		18.17	■□□□□ 0.5
CCC1	YLR220W	RRP8	P38961	392 aa	Known RBP	18.17	■□□□□ 0.5
CCC1	YLR220W	VHR2	P40041	505 aa		18.17	■□□□□ 0.5
CCC1	YLR220W	AIM9	P40053	627 aa	Known RBP	18.17	■□□□□ 0.5
CCC1	YLR220W	SPO22	P40511	975 aa		18.17	■□□□□ 0.5
CCC1	YLR220W	SPN1	Q06505	410 aa	Predicted RBP	18.17	■□□□□ 0.5
CCC1	YLR220W	KIN1	P13185	1064 aa		18.16	■□□□□ 0.5
CCC1	YLR220W	ADP1	P25371	1049 aa		18.16	■□□□□ 0.5
CCC1	YLR220W	KEL1	P38853	1164 aa	Known RBP	18.15	■□□□□ 0.5
CCC1	YLR220W	CWC15	Q03772	175 aa	Known RBP	18.15	■□□□□ 0.5
CCC1	YLR220W	CSR2	Q12734	1121 aa		18.15	■□□□□ 0.5
CCC1	YLR220W	RAD61	Q99359	647 aa		18.15	■□□□□ 0.5
CCC1	YLR220W	CIC1	P38779	376 aa	Known RBP	18.14	■□□□□ 0.49
CCC1	YLR220W	PEP3	P27801	918 aa		18.13	■□□□□ 0.49
CCC1	YLR220W	MYO3	P36006	1272 aa		18.13	■□□□□ 0.49
CCC1	YLR220W	UFD2	P54860	961 aa		18.13	■□□□□ 0.49
CCC1	YLR220W	MRD1	Q06106	887 aa	Known RBP	18.13	■□□□□ 0.49
CCC1	YLR220W	TYW1	Q08960	810 aa	Known RBP	18.13	■□□□□ 0.49
CCC1	YLR220W	PMA1	P05030	918 aa	Known RBP	18.12	■□□□□ 0.49
CCC1	YLR220W	RER2	P35196	286 aa		18.12	■□□□□ 0.49
CCC1	YLR220W	YIL089W	P40500	205 aa		18.12	■□□□□ 0.49
CCC1	YLR220W	PRE8	P23639	250 aa		18.11	■□□□□ 0.49
CCC1	YLR220W	VID27	P40157	782 aa		18.11	■□□□□ 0.49
CCC1	YLR220W	PGA3	Q12746	312 aa	Known RBP	18.11	■□□□□ 0.49
CCC1	YLR220W	GAL2	P13181	574 aa		18.1	■□□□□ 0.49
CCC1	YLR220W	YBL028C	P38202	106 aa		18.1	■□□□□ 0.49
CCC1	YLR220W	ECM23	Q02710	187 aa		18.1	■□□□□ 0.49
CCC1	YLR220W	SKG3	Q06315	1026 aa		18.09	■□□□□ 0.49
CCC1	YLR220W	MPH3	P0CE00	602 aa		18.08	■□□□□ 0.48
CCC1	YLR220W	SRM1	P21827	482 aa		18.08	■□□□□ 0.48
CCC1	YLR220W	IMP2'	P32351	346 aa		18.08	■□□□□ 0.48
CCC1	YLR220W	ANP1	P32629	500 aa		18.08	■□□□□ 0.48
CCC1	YLR220W	SNU71	P53207	620 aa	Known RBP	18.08	■□□□□ 0.48
CCC1	YLR220W	YDL124W	Q07551	312 aa	Known RBP	18.08	■□□□□ 0.48
CCC1	YLR220W	RNR2	P09938	399 aa	Known RBP	18.06	■□□□□ 0.48
CCC1	YLR220W	TPS3	P38426	1054 aa	Known RBP	18.06	■□□□□ 0.48
CCC1	YLR220W	HDA1	P53973	706 aa		18.05	■□□□□ 0.48
CCC1	YLR220W	CST26	P38226	397 aa		18.04	■□□□□ 0.48
CCC1	YLR220W	RRT6	P53117	311 aa	Predicted RBP	18.04	■□□□□ 0.48
CCC1	YLR220W	TUB2	P02557	457 aa	Known RBP	18.03	■□□□□ 0.48
CCC1	YLR220W	PRO3	P32263	286 aa	Known RBP	18.03	■□□□□ 0.48
CCC1	YLR220W	KRI1	P42846	591 aa	Known RBP	18.03	■□□□□ 0.48
CCC1	YLR220W	PTK2	P47116	818 aa	Known RBP	18.03	■□□□□ 0.48
CCC1	YLR220W	EST2	Q06163	884 aa		18.03	■□□□□ 0.48
CCC1	YLR220W	PNT1	P38969	423 aa		18.02	■□□□□ 0.48
CCC1	YLR220W	RIT1	P23796	513 aa		18.01	■□□□□ 0.47
CCC1	YLR220W	PES4	P39684	611 aa		18.01	■□□□□ 0.47
CCC1	YLR220W	ESF1	Q06344	628 aa	Known RBP	18.01	■□□□□ 0.47
CCC1	YLR220W	TUS1	Q06412	1307 aa		18	■□□□□ 0.47
CCC1	YLR220W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	18	■□□□□ 0.47	not detected
CCC1	YLR220W	MAK31	P23059	88 aa		18	■□□□□ 0.47
CCC1	YLR220W	FBP26	P32604	452 aa		18	■□□□□ 0.47
CCC1	YLR220W	VPS8	P39702	1274 aa		18	■□□□□ 0.47
CCC1	YLR220W	MYO5	Q04439	1219 aa	Known RBP	18	■□□□□ 0.47
CCC1	YLR220W	TFC6	Q06339	672 aa		18	■□□□□ 0.47
CCC1	YLR220W	RLF2	Q12495	606 aa		18	■□□□□ 0.47
CCC1	YLR220W	TOM1	Q03280	3268 aa		17.99	■□□□□ 0.47
CCC1	YLR220W	CHS3	P29465	1165 aa		17.99	■□□□□ 0.47
CCC1	YLR220W	TIF4631	P39935	952 aa	Known RBP	17.98	■□□□□ 0.47
CCC1	YLR220W	VID28	P40547	921 aa		17.98	■□□□□ 0.47
CCC1	YLR220W	MATALPHA2	P0CY08	210 aa		17.97	■□□□□ 0.47
CCC1	YLR220W	HMLALPHA2	P0CY09	210 aa		17.97	■□□□□ 0.47
CCC1	YLR220W	RPT6	Q01939	405 aa	Known RBP	17.97	■□□□□ 0.47
CCC1	YLR220W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	17.96	■□□□□ 0.47	not detected
CCC1	YLR220W	OPY1	P38271	328 aa		17.96	■□□□□ 0.47
CCC1	YLR220W	LAP2	Q10740	671 aa		17.96	■□□□□ 0.47
CCC1	YLR220W	GIN4	Q12263	1142 aa		17.96	■□□□□ 0.47
CCC1	YLR220W	SRS2	P12954	1174 aa		17.95	■□□□□ 0.46
CCC1	YLR220W	ACA1	P39970	489 aa		17.95	■□□□□ 0.46
CCC1	YLR220W	ALG2	P43636	503 aa		17.95	■□□□□ 0.46
CCC1	YLR220W	CLF1	Q12309	687 aa	Predicted RBP	17.95	■□□□□ 0.46
CCC1	YLR220W	HVG1	P0CE11	249 aa		17.93	■□□□□ 0.46
CCC1	YLR220W	PCT1	P13259	424 aa		17.93	■□□□□ 0.46
CCC1	YLR220W	YKE2	P52553	114 aa		17.93	■□□□□ 0.46
CCC1	YLR220W	FOL1	P53848	824 aa		17.93	■□□□□ 0.46
CCC1	YLR220W	SIS2	P36024	562 aa		17.92	■□□□□ 0.46
CCC1	YLR220W	CSM2	P40465	213 aa		17.92	■□□□□ 0.46
CCC1	YLR220W	ARP5	P53946	755 aa		17.92	■□□□□ 0.46
CCC1	YLR220W	SUB2	Q07478	446 aa	Known RBP	17.92	■□□□□ 0.46
CCC1	YLR220W	ERG12	P07277	443 aa		17.91	■□□□□ 0.46
CCC1	YLR220W	ACE2	P21192	770 aa		17.91	■□□□□ 0.46
CCC1	YLR220W	RPL8B	P29453	256 aa	Known RBP	17.91	■□□□□ 0.46
CCC1	YLR220W	MAL31	P38156	614 aa		17.91	■□□□□ 0.46
CCC1	YLR220W	YLR407W	Q06070	228 aa		17.91	■□□□□ 0.46
CCC1	YLR220W	NUC1	P08466	329 aa		17.9	■□□□□ 0.46
CCC1	YLR220W	SPT21	P35209	758 aa		17.9	■□□□□ 0.46
CCC1	YLR220W	BSD2	P38356	321 aa		17.9	■□□□□ 0.46
CCC1	YLR220W	YHL017W	P38745	532 aa		17.9	■□□□□ 0.46
CCC1	YLR220W	VPS30	Q02948	557 aa		17.9	■□□□□ 0.46
CCC1	YLR220W	PSK2	Q08217	1101 aa		17.9	■□□□□ 0.46

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