RNA–Protein interactions for RNA: YKR014C

YPT52, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene YPT52, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT52YKR014C GIP2P40036 548 aa5.76□□□□□ -1.49
YPT52YKR014C SOK2P53438 785 aaPredicted RBP5.76□□□□□ -1.49
YPT52YKR014C BIO5P53744 561 aaKnown RBP5.76□□□□□ -1.49
YPT52YKR014C NUT2Q06213 157 aa5.76□□□□□ -1.49
YPT52YKR014C PYC2P32327 1180 aaKnown RBP5.75□□□□□ -1.49
YPT52YKR014C SAM37P50110 327 aa5.75□□□□□ -1.49
YPT52YKR014C SEC20P28791 383 aa5.74□□□□□ -1.49
YPT52YKR014C SAC7P17121 654 aa5.73□□□□□ -1.49
YPT52YKR014C TAT1P38085 619 aa5.73□□□□□ -1.49
YPT52YKR014C YHL008CP38750 627 aa5.73□□□□□ -1.49
YPT52YKR014C ALD3P54114 506 aa5.73□□□□□ -1.49
YPT52YKR014C SOG2Q08817 791 aa5.73□□□□□ -1.49
YPT52YKR014C MSC6Q08818 692 aaKnown RBP5.73□□□□□ -1.49
YPT52YKR014C MNL2Q12205 849 aa5.73□□□□□ -1.49
YPT52YKR014C FRT1Q99332 602 aa5.73□□□□□ -1.49
YPT52YKR014C TY4B-PA0A0B7P3V8 1104 aa5.72□□□□□ -1.49
YPT52YKR014C PPX1P38698 397 aa5.72□□□□□ -1.49
YPT52YKR014C RRM3P38766 723 aa5.72□□□□□ -1.49
YPT52YKR014C SKN7P38889 622 aa5.72□□□□□ -1.49
YPT52YKR014C NEO1P40527 1151 aa5.72□□□□□ -1.49
YPT52YKR014C TED1P40533 473 aa5.72□□□□□ -1.49
YPT52YKR014C DSE4P53753 1117 aa5.72□□□□□ -1.49
YPT52YKR014C NOC3Q07896 663 aaPredicted RBP5.72□□□□□ -1.49
YPT52YKR014C TY4A-HQ6Q5P6 413 aa5.72□□□□□ -1.49
YPT52YKR014C CIC1P38779 376 aaKnown RBP5.71□□□□□ -1.5
YPT52YKR014C THI12P42883 340 aa5.71□□□□□ -1.5
YPT52YKR014C THI5P43534 340 aa5.71□□□□□ -1.5
YPT52YKR014C YJR124CP47159 448 aa5.71□□□□□ -1.5
YPT52YKR014C THI11P47183 340 aa5.71□□□□□ -1.5
YPT52YKR014C THI13Q07748 340 aa5.71□□□□□ -1.5
YPT52YKR014C GCD6P32501 712 aaKnown RBP5.7□□□□□ -1.5
YPT52YKR014C BUD9P53226 547 aa5.7□□□□□ -1.5
YPT52YKR014C SPO71Q03868 1245 aa5.7□□□□□ -1.5
YPT52YKR014C YDR215CQ12240 137 aa5.7□□□□□ -1.5
YPT52YKR014C GLO4Q12320 285 aa5.7□□□□□ -1.5
YPT52YKR014C FLP1P03870 423 aa5.69□□□□□ -1.5
YPT52YKR014C SFA1P32771 386 aa5.69□□□□□ -1.5
YPT52YKR014C PAN5P38787 379 aa5.69□□□□□ -1.5
YPT52YKR014C FET4P40988 552 aa5.69□□□□□ -1.5
YPT52YKR014C PRY1P47032 299 aa5.69□□□□□ -1.5
YPT52YKR014C CCT8P47079 568 aaKnown RBP5.69□□□□□ -1.5
YPT52YKR014C YNR065CP53751 1116 aa5.69□□□□□ -1.5
YPT52YKR014C CTR9P89105 1077 aa5.69□□□□□ -1.5
YPT52YKR014C YML020WQ03722 664 aa5.69□□□□□ -1.5
YPT52YKR014C INP54Q08227 384 aaKnown RBP5.69□□□□□ -1.5
YPT52YKR014C YCK2P23292 546 aaKnown RBP5.68□□□□□ -1.5
YPT52YKR014C TFA2P36145 328 aa5.68□□□□□ -1.5
YPT52YKR014C LSB6P42951 607 aa5.68□□□□□ -1.5
YPT52YKR014C GPI13Q07830 1017 aa5.68□□□□□ -1.5
YPT52YKR014C RSC6P25632 483 aa5.67□□□□□ -1.5
YPT52YKR014C MAE1P36013 669 aaKnown RBP5.67□□□□□ -1.5
YPT52YKR014C SLN1P39928 1220 aaPredicted RBP5.67□□□□□ -1.5
YPT52YKR014C FAR11P53917 953 aa5.67□□□□□ -1.5
YPT52YKR014C MSH6Q03834 1242 aa5.67□□□□□ -1.5
YPT52YKR014C PMT7Q06644 662 aa5.67□□□□□ -1.5
YPT52YKR014C AI3P03877 415 aa5.66□□□□□ -1.5
YPT52YKR014C VPS35P34110 944 aa5.66□□□□□ -1.5
YPT52YKR014C AMN1P38285 549 aaPredicted RBP5.66□□□□□ -1.5
YPT52YKR014C RVS167P39743 482 aaKnown RBP5.66□□□□□ -1.5
YPT52YKR014C OXR1Q08952 273 aa5.66□□□□□ -1.5
YPT52YKR014C YLL054CQ12244 843 aa5.66□□□□□ -1.5
YPT52YKR014C HVG1P0CE11 249 aa5.65□□□□□ -1.5
YPT52YKR014C NPR1P22211 790 aa5.65□□□□□ -1.5
YPT52YKR014C IPL1P38991 367 aa5.65□□□□□ -1.5
YPT52YKR014C POL5P39985 1022 aaKnown RBP5.65□□□□□ -1.5
YPT52YKR014C HAS1Q03532 505 aaKnown RBP5.65□□□□□ -1.5
YPT52YKR014C YCS4Q06156 1176 aa5.65□□□□□ -1.5
YPT52YKR014C COBP00163 385 aa5.64□□□□□ -1.51
YPT52YKR014C ARI1P53111 347 aaKnown RBP5.64□□□□□ -1.51
YPT52YKR014C NUT1P53114 1132 aa5.64□□□□□ -1.51
YPT52YKR014C SEN54Q02825 467 aaPredicted RBP5.64□□□□□ -1.51
YPT52YKR014C GAS5Q08193 484 aa5.64□□□□□ -1.51
YPT52YKR014C ELG1Q12050 791 aa5.64□□□□□ -1.51
YPT52YKR014C CMR1Q12510 522 aaKnown RBP5.64□□□□□ -1.51
YPT52YKR014C PHO4P07270 312 aaKnown RBP5.63□□□□□ -1.51
YPT52YKR014C SBP1P10080 294 aaKnown RBP5.63□□□□□ -1.51
YPT52YKR014C MCM5P29496 775 aaKnown RBP5.63□□□□□ -1.51
YPT52YKR014C RIM11P38615 370 aa5.63□□□□□ -1.51
YPT52YKR014C SHU2P38957 223 aa5.63□□□□□ -1.51
YPT52YKR014C YMR074CQ04773 145 aa5.63□□□□□ -1.51
YPT52YKR014C TY1A-NL1Q12391 440 aaKnown RBP5.63□□□□□ -1.51
YPT52YKR014C KAR2P16474 682 aaKnown RBP5.62□□□□□ -1.51
YPT52YKR014C HEM3P28789 327 aa5.62□□□□□ -1.51
YPT52YKR014C MET4P32389 672 aa5.62□□□□□ -1.51
YPT52YKR014C SAP155P43612 1002 aa5.62□□□□□ -1.51
YPT52YKR014C MON1P53129 644 aa5.62□□□□□ -1.51
YPT52YKR014C NRD1P53617 575 aaKnown RBP RIP-Chip data5.62□□□□□ -1.51not detected
YPT52YKR014C YPL034WQ03083 165 aa5.62□□□□□ -1.51
YPT52YKR014C MCA1Q08601 432 aa5.62□□□□□ -1.51
YPT52YKR014C WHI5Q12416 295 aa5.62□□□□□ -1.51
YPT52YKR014C HTS1P07263 546 aaKnown RBP5.61□□□□□ -1.51
YPT52YKR014C PRP5P21372 849 aaPredicted RBP5.61□□□□□ -1.51
YPT52YKR014C COQ2P32378 372 aa5.61□□□□□ -1.51
YPT52YKR014C YAF9P53930 226 aa5.61□□□□□ -1.51
YPT52YKR014C NOP8Q08287 484 aaPredicted RBP5.61□□□□□ -1.51
YPT52YKR014C DUR3P33413 735 aa5.6□□□□□ -1.51
YPT52YKR014C YKL077WP36081 392 aa5.6□□□□□ -1.51
YPT52YKR014C MGE1P38523 228 aa5.6□□□□□ -1.51
YPT52YKR014C DAK2P43550 591 aa5.6□□□□□ -1.51
YPT52YKR014C GCV1P48015 400 aa5.6□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms