RNA–Protein interactions for RNA: YIL042C

PKP1, Transcript of Mitochondrial protein kinase, yeast

Gene PKP1, Length 1,185 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PKP1	YIL042C	RFC1	P38630	861 aa	Known RBP	18.67	■□□□□ 0.58
PKP1	YIL042C	IRC8	P47046	822 aa		18.67	■□□□□ 0.58
PKP1	YIL042C	BBC1	P47068	1157 aa		18.67	■□□□□ 0.58
PKP1	YIL042C	PKH3	Q03306	898 aa	Predicted RBP	18.67	■□□□□ 0.58
PKP1	YIL042C	KEL3	Q08979	651 aa	Predicted RBP	18.67	■□□□□ 0.58
PKP1	YIL042C	PBY1	P38254	753 aa		18.66	■□□□□ 0.58
PKP1	YIL042C	RMD1	Q03441	430 aa		18.66	■□□□□ 0.58
PKP1	YIL042C	NCS6	P53088	359 aa		18.65	■□□□□ 0.58
PKP1	YIL042C	BRE1	Q07457	700 aa	Known RBP	18.65	■□□□□ 0.58
PKP1	YIL042C	OSH3	P38713	996 aa	Known RBP	18.64	■□□□□ 0.57
PKP1	YIL042C	LAM4	P38800	1345 aa		18.64	■□□□□ 0.57
PKP1	YIL042C	ACA1	P39970	489 aa		18.63	■□□□□ 0.57
PKP1	YIL042C	NKP2	Q06162	153 aa		18.63	■□□□□ 0.57
PKP1	YIL042C	YDL124W	Q07551	312 aa	Known RBP	18.63	■□□□□ 0.57
PKP1	YIL042C	KTR1	P27810	393 aa	Known RBP	18.62	■□□□□ 0.57
PKP1	YIL042C	ASH1	P34233	588 aa		18.62	■□□□□ 0.57
PKP1	YIL042C	JIP4	Q03361	876 aa		18.61	■□□□□ 0.57
PKP1	YIL042C	YPL260W	Q08977	551 aa		18.61	■□□□□ 0.57
PKP1	YIL042C	SNU71	P53207	620 aa	Known RBP	18.6	■□□□□ 0.57
PKP1	YIL042C	TAH18	Q12181	623 aa		18.6	■□□□□ 0.57
PKP1	YIL042C	MPH3	P0CE00	602 aa		18.58	■□□□□ 0.56
PKP1	YIL042C	OCT1	P35999	772 aa		18.58	■□□□□ 0.56
PKP1	YIL042C	YHL050C	P38721	697 aa		18.58	■□□□□ 0.56
PKP1	YIL042C	COQ1	P18900	473 aa		18.57	■□□□□ 0.56
PKP1	YIL042C	OPI1	P21957	404 aa		18.57	■□□□□ 0.56
PKP1	YIL042C	PRE8	P23639	250 aa		18.57	■□□□□ 0.56
PKP1	YIL042C	YDJ1	P25491	409 aa	Known RBP	18.57	■□□□□ 0.56
PKP1	YIL042C	SPT21	P35209	758 aa		18.57	■□□□□ 0.56
PKP1	YIL042C	NET1	P47035	1189 aa		18.57	■□□□□ 0.56
PKP1	YIL042C	CST26	P38226	397 aa		18.56	■□□□□ 0.56
PKP1	YIL042C	ECM16	Q04217	1267 aa	Known RBP	18.56	■□□□□ 0.56
PKP1	YIL042C	RTS1	P38903	757 aa		18.55	■□□□□ 0.56
PKP1	YIL042C	FPR3	P38911	411 aa	Known RBP	18.55	■□□□□ 0.56
PKP1	YIL042C	TIF4631	P39935	952 aa	Known RBP	18.55	■□□□□ 0.56
PKP1	YIL042C	SPR3	P41901	512 aa		18.55	■□□□□ 0.56
PKP1	YIL042C	ENP2	P48234	707 aa	Known RBP	18.55	■□□□□ 0.56
PKP1	YIL042C	FBP1	P09201	348 aa		18.53	■□□□□ 0.56
PKP1	YIL042C	SRM1	P21827	482 aa		18.53	■□□□□ 0.56
PKP1	YIL042C	SKG3	Q06315	1026 aa		18.53	■□□□□ 0.56
PKP1	YIL042C	CHO2	P05374	869 aa	Known RBP	18.51	■□□□□ 0.55
PKP1	YIL042C	IXR1	P33417	597 aa		18.51	■□□□□ 0.55
PKP1	YIL042C	YLR225C	Q05948	407 aa	Known RBP	18.51	■□□□□ 0.55
PKP1	YIL042C	LAP2	Q10740	671 aa		18.51	■□□□□ 0.55
PKP1	YIL042C	RAD61	Q99359	647 aa		18.51	■□□□□ 0.55
PKP1	YIL042C	ERG7	P38604	731 aa		18.5	■□□□□ 0.55
PKP1	YIL042C	SUB2	Q07478	446 aa	Known RBP	18.5	■□□□□ 0.55
PKP1	YIL042C	RIM20	Q12033	661 aa		18.5	■□□□□ 0.55
PKP1	YIL042C	RAD50	P12753	1312 aa		18.49	■□□□□ 0.55
PKP1	YIL042C	SPB4	P25808	606 aa	Predicted RBP	18.49	■□□□□ 0.55
PKP1	YIL042C	MET1	P36150	593 aa		18.49	■□□□□ 0.55
PKP1	YIL042C	STM1	P39015	273 aa	Known RBP	18.49	■□□□□ 0.55
PKP1	YIL042C	VID27	P40157	782 aa		18.49	■□□□□ 0.55
PKP1	YIL042C	LYS14	P40971	790 aa		18.49	■□□□□ 0.55
PKP1	YIL042C	KRS1	P15180	591 aa	Known RBP	18.48	■□□□□ 0.55
PKP1	YIL042C	SGD1	Q06132	899 aa		18.48	■□□□□ 0.55
PKP1	YIL042C	YJL007C	P47080	104 aa		18.47	■□□□□ 0.55
PKP1	YIL042C	CFT2	Q12102	859 aa	Predicted RBP	18.47	■□□□□ 0.55
PKP1	YIL042C	SLN1	P39928	1220 aa	Predicted RBP	18.46	■□□□□ 0.55
PKP1	YIL042C	VAB2	P40003	282 aa		18.46	■□□□□ 0.55
PKP1	YIL042C	ERG12	P07277	443 aa		18.45	■□□□□ 0.54
PKP1	YIL042C	SDH2	P21801	266 aa		18.45	■□□□□ 0.54
PKP1	YIL042C	AAP1	P37898	856 aa	Known RBP	18.45	■□□□□ 0.54
PKP1	YIL042C	RPS15	Q01855	142 aa	Known RBP	18.45	■□□□□ 0.54
PKP1	YIL042C	CHS3	P29465	1165 aa		18.44	■□□□□ 0.54
PKP1	YIL042C	MRD1	Q06106	887 aa	Known RBP	18.44	■□□□□ 0.54
PKP1	YIL042C	TUS1	Q06412	1307 aa		18.44	■□□□□ 0.54
PKP1	YIL042C	MCD4	P36051	919 aa		18.43	■□□□□ 0.54
PKP1	YIL042C	PER1	P25625	357 aa		18.42	■□□□□ 0.54
PKP1	YIL042C	RRP8	P38961	392 aa	Known RBP	18.42	■□□□□ 0.54
PKP1	YIL042C	UBX5	Q06682	500 aa		18.42	■□□□□ 0.54
PKP1	YIL042C	VAS1	P07806	1104 aa	Known RBP	18.41	■□□□□ 0.54
PKP1	YIL042C	CDC60	P26637	1090 aa	Known RBP	18.41	■□□□□ 0.54
PKP1	YIL042C	PRO3	P32263	286 aa	Known RBP	18.4	■□□□□ 0.54
PKP1	YIL042C	MYO3	P36006	1272 aa		18.4	■□□□□ 0.54
PKP1	YIL042C	YML037C	Q03703	340 aa		18.4	■□□□□ 0.54
PKP1	YIL042C	UFD2	P54860	961 aa		18.39	■□□□□ 0.53
PKP1	YIL042C	SSF2	Q12153	453 aa	Predicted RBP	18.39	■□□□□ 0.53
PKP1	YIL042C	DIT2	P21595	489 aa		18.38	■□□□□ 0.53
PKP1	YIL042C	TY3A-G	Q12173	290 aa		18.38	■□□□□ 0.53
PKP1	YIL042C	TY3A-I	Q99219	290 aa		18.38	■□□□□ 0.53
PKP1	YIL042C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	18.37	■□□□□ 0.53	not detected
PKP1	YIL042C	PIB1	Q06651	286 aa		18.37	■□□□□ 0.53
PKP1	YIL042C	VPS8	P39702	1274 aa		18.36	■□□□□ 0.53
PKP1	YIL042C	SAM2	P19358	384 aa	Known RBP	18.35	■□□□□ 0.53
PKP1	YIL042C	ANP1	P32629	500 aa		18.34	■□□□□ 0.53
PKP1	YIL042C	BRN1	P38170	754 aa		18.34	■□□□□ 0.53
PKP1	YIL042C	CRG1	P38892	291 aa	RIP-Chip data	18.34	■□□□□ 0.53	not detected
PKP1	YIL042C	SOL4	P53315	255 aa		18.34	■□□□□ 0.53
PKP1	YIL042C	HDA1	P53973	706 aa		18.34	■□□□□ 0.53
PKP1	YIL042C	FPR4	Q06205	392 aa	Predicted RBP	18.34	■□□□□ 0.53
PKP1	YIL042C	VPS13	Q07878	3144 aa		18.32	■□□□□ 0.52
PKP1	YIL042C	ACE2	P21192	770 aa		18.32	■□□□□ 0.52
PKP1	YIL042C	RIT1	P23796	513 aa		18.32	■□□□□ 0.52
PKP1	YIL042C	ATG1	P53104	897 aa		18.32	■□□□□ 0.52
PKP1	YIL042C	SPN1	Q06505	410 aa	Predicted RBP	18.32	■□□□□ 0.52
PKP1	YIL042C	PTK2	P47116	818 aa	Known RBP	18.31	■□□□□ 0.52
PKP1	YIL042C	SRS2	P12954	1174 aa		18.3	■□□□□ 0.52
PKP1	YIL042C	PKC1	P24583	1151 aa		18.3	■□□□□ 0.52
PKP1	YIL042C	PES4	P39684	611 aa		18.3	■□□□□ 0.52
PKP1	YIL042C	UBP9	P39967	754 aa		18.3	■□□□□ 0.52

Retrieved 100 of 5,963 RNA–protein pairs in 109.4 ms