RNA–Protein interactions for RNA: YHR150W

PEX28, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX28, Length 1,740 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX28YHR150W HAL5P38970 855 aaKnown RBP8.58□□□□□ -1.04
PEX28YHR150W FYV10P40492 516 aa8.58□□□□□ -1.04
PEX28YHR150W CTH1P47976 325 aa8.58□□□□□ -1.04
PEX28YHR150W SSA2P10592 639 aaKnown RBP8.57□□□□□ -1.04
PEX28YHR150W YBL086CP38177 466 aa8.57□□□□□ -1.04
PEX28YHR150W RRM3P38766 723 aa8.57□□□□□ -1.04
PEX28YHR150W NUG1P40010 520 aaKnown RBP8.57□□□□□ -1.04
PEX28YHR150W ICP55P40051 511 aa8.57□□□□□ -1.04
PEX28YHR150W YIR042CP40586 236 aa8.57□□□□□ -1.04
PEX28YHR150W TFC8Q12308 588 aa8.57□□□□□ -1.04
PEX28YHR150W TOS1P38288 455 aa8.57□□□□□ -1.04
PEX28YHR150W EPL1P43572 832 aa8.57□□□□□ -1.04
PEX28YHR150W INM2Q05533 292 aa8.57□□□□□ -1.04
PEX28YHR150W LAM4P38800 1345 aa8.56□□□□□ -1.04
PEX28YHR150W UGA2P38067 497 aa8.56□□□□□ -1.04
PEX28YHR150W RRP8P38961 392 aaKnown RBP8.56□□□□□ -1.04
PEX28YHR150W BBC1P47068 1157 aa8.56□□□□□ -1.04
PEX28YHR150W YPT11P48559 417 aa8.56□□□□□ -1.04
PEX28YHR150W YLR407WQ06070 228 aa8.56□□□□□ -1.04
PEX28YHR150W SFI1Q12369 946 aa8.56□□□□□ -1.04
PEX28YHR150W SRP40P32583 406 aaPredicted RBP8.55□□□□□ -1.04
PEX28YHR150W MET1P36150 593 aa8.55□□□□□ -1.04
PEX28YHR150W NOC2P39744 710 aaKnown RBP8.55□□□□□ -1.04
PEX28YHR150W IRC8P47046 822 aa8.55□□□□□ -1.04
PEX28YHR150W RPT4P53549 437 aaKnown RBP8.55□□□□□ -1.04
PEX28YHR150W ECM23Q02710 187 aa8.55□□□□□ -1.04
PEX28YHR150W PKH3Q03306 898 aaPredicted RBP8.55□□□□□ -1.04
PEX28YHR150W TAH18Q12181 623 aa8.55□□□□□ -1.04
PEX28YHR150W GLO3P38682 493 aaKnown RBP8.54□□□□□ -1.04
PEX28YHR150W SSF2Q12153 453 aaPredicted RBP8.54□□□□□ -1.04
PEX28YHR150W HSP82P02829 709 aaKnown RBP8.54□□□□□ -1.04
PEX28YHR150W GSY2P27472 705 aa8.54□□□□□ -1.04
PEX28YHR150W RPT3P33298 428 aaKnown RBP8.54□□□□□ -1.04
PEX28YHR150W WAR1Q03631 944 aa8.54□□□□□ -1.04
PEX28YHR150W SKI2P35207 1287 aaKnown RBP RIP-Chip data8.53□□□□□ -1.04not detected
PEX28YHR150W GRX7P38068 203 aa8.53□□□□□ -1.04
PEX28YHR150W TCD1P38756 429 aa8.52□□□□□ -1.05
PEX28YHR150W SPL2P38839 148 aa8.52□□□□□ -1.05
PEX28YHR150W GTT3P39996 337 aa8.52□□□□□ -1.05
PEX28YHR150W CEP3P40969 608 aa8.52□□□□□ -1.05
PEX28YHR150W IRC4Q03036 179 aa8.52□□□□□ -1.05
PEX28YHR150W PGI1P12709 554 aaKnown RBP8.51□□□□□ -1.05
PEX28YHR150W RGP1P16664 663 aa8.51□□□□□ -1.05
PEX28YHR150W HCA4P20448 770 aaKnown RBP8.51□□□□□ -1.05
PEX28YHR150W SIT4P20604 311 aa8.51□□□□□ -1.05
PEX28YHR150W KRE2P27809 442 aa8.51□□□□□ -1.05
PEX28YHR150W MDL2P33311 773 aa8.51□□□□□ -1.05
PEX28YHR150W LTV1P34078 463 aa8.51□□□□□ -1.05
PEX28YHR150W YKT6P36015 200 aaKnown RBP8.51□□□□□ -1.05
PEX28YHR150W RFT1P38206 574 aaPredicted RBP8.51□□□□□ -1.05
PEX28YHR150W YCK3P39962 524 aa8.51□□□□□ -1.05
PEX28YHR150W SPN1Q06505 410 aaPredicted RBP8.51□□□□□ -1.05
PEX28YHR150W QCR6P00127 147 aa8.51□□□□□ -1.05
PEX28YHR150W DIT2P21595 489 aa8.51□□□□□ -1.05
PEX28YHR150W MCM4P30665 933 aaKnown RBP8.51□□□□□ -1.05
PEX28YHR150W PTK1P36002 662 aaPredicted RBP8.51□□□□□ -1.05
PEX28YHR150W BOI1P38041 980 aaKnown RBP8.51□□□□□ -1.05
PEX28YHR150W PFF1P38244 976 aa8.51□□□□□ -1.05
PEX28YHR150W OSW7P43611 510 aa8.51□□□□□ -1.05
PEX28YHR150W JSN1P47135 1091 aaKnown RBP RIP-Chip data8.51□□□□□ -1.05not detected
PEX28YHR150W UBP10P53874 792 aaPredicted RBP8.51□□□□□ -1.05
PEX28YHR150W KAR5Q04746 504 aa8.51□□□□□ -1.05
PEX28YHR150W CYB2P00175 591 aa8.5□□□□□ -1.05
PEX28YHR150W HXK1P04806 485 aaKnown RBP8.5□□□□□ -1.05
PEX28YHR150W PFK2P16862 959 aaKnown RBP RIP-Chip data8.5□□□□□ -1.05not detected
PEX28YHR150W TFG2P41896 400 aaPredicted RBP8.5□□□□□ -1.05
PEX28YHR150W IOC3P43596 787 aa8.5□□□□□ -1.05
PEX28YHR150W JJJ2P46997 583 aa8.5□□□□□ -1.05
PEX28YHR150W EST2Q06163 884 aa8.5□□□□□ -1.05
PEX28YHR150W PPM2Q08282 695 aa8.5□□□□□ -1.05
PEX28YHR150W FAS2P19097 1887 aaKnown RBP8.5□□□□□ -1.05
PEX28YHR150W COQ1P18900 473 aa8.49□□□□□ -1.05
PEX28YHR150W LCB1P25045 558 aaKnown RBP8.49□□□□□ -1.05
PEX28YHR150W SMY1P32364 656 aaKnown RBP8.49□□□□□ -1.05
PEX28YHR150W RER2P35196 286 aa8.49□□□□□ -1.05
PEX28YHR150W CRG1P38892 291 aaRIP-Chip data8.49□□□□□ -1.05not detected
PEX28YHR150W MSN5P52918 1224 aa8.49□□□□□ -1.05
PEX28YHR150W MRD1Q06106 887 aaKnown RBP8.49□□□□□ -1.05
PEX28YHR150W PSY4P38193 441 aa8.49□□□□□ -1.05
PEX28YHR150W GSM1P42950 618 aa8.49□□□□□ -1.05
PEX28YHR150W YFH7P43591 353 aa8.49□□□□□ -1.05
PEX28YHR150W UFD2P54860 961 aa8.49□□□□□ -1.05
PEX28YHR150W CDC15P27636 974 aa8.48□□□□□ -1.05
PEX28YHR150W GEF1P37020 779 aa8.48□□□□□ -1.05
PEX28YHR150W RPN10P38886 268 aaKnown RBP8.48□□□□□ -1.05
PEX28YHR150W AKR1P39010 764 aa8.48□□□□□ -1.05
PEX28YHR150W UBX2Q04228 584 aa8.48□□□□□ -1.05
PEX28YHR150W NPL4P33755 580 aa8.47□□□□□ -1.05
PEX28YHR150W ERO1Q03103 563 aa8.47□□□□□ -1.05
PEX28YHR150W DCS2Q12123 353 aa8.47□□□□□ -1.05
PEX28YHR150W PSF3Q12146 194 aa8.47□□□□□ -1.05
PEX28YHR150W CHO2P05374 869 aaKnown RBP8.46□□□□□ -1.05
PEX28YHR150W MPH3P0CE00 602 aa8.46□□□□□ -1.05
PEX28YHR150W PIP2P52960 996 aa8.46□□□□□ -1.05
PEX28YHR150W VPS60Q03390 229 aa8.46□□□□□ -1.05
PEX28YHR150W TMA16Q08687 178 aa8.46□□□□□ -1.05
PEX28YHR150W APL4Q12028 832 aa8.46□□□□□ -1.05
PEX28YHR150W CBP3P21560 335 aa8.46□□□□□ -1.06
PEX28YHR150W RET1P22276 1149 aaKnown RBP8.46□□□□□ -1.06
PEX28YHR150W PCH2P38126 564 aa8.46□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms