RNA–Protein interactions for RNA: YHR052W

CIC1, Transcript of Essential protein that interacts with proteasome components, yeastyeast

Gene CIC1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIC1YHR052W SEA4P38164 1038 aa5.78□□□□□ -1.48
CIC1YHR052W PUN1Q06991 263 aa5.78□□□□□ -1.48
CIC1YHR052W POL5P39985 1022 aaKnown RBP5.77□□□□□ -1.49
CIC1YHR052W GUP1P53154 560 aa5.77□□□□□ -1.49
CIC1YHR052W NCE103P53615 221 aa5.77□□□□□ -1.49
CIC1YHR052W ALD3P54114 506 aa5.77□□□□□ -1.49
CIC1YHR052W PUP1P25043 261 aa5.76□□□□□ -1.49
CIC1YHR052W MAE1P36013 669 aaKnown RBP5.76□□□□□ -1.49
CIC1YHR052W SDH1Q00711 640 aa5.76□□□□□ -1.49
CIC1YHR052W SOG2Q08817 791 aa5.76□□□□□ -1.49
CIC1YHR052W RNQ1P25367 405 aa5.75□□□□□ -1.49
CIC1YHR052W AIM46P38885 310 aa5.75□□□□□ -1.49
CIC1YHR052W MSB1P21339 1137 aaKnown RBP5.74□□□□□ -1.49
CIC1YHR052W FIR1P40020 876 aa5.74□□□□□ -1.49
CIC1YHR052W HXT8P40886 569 aa5.74□□□□□ -1.49
CIC1YHR052W FUS1P11710 512 aa5.73□□□□□ -1.49
CIC1YHR052W ERS1P17261 260 aa5.73□□□□□ -1.49
CIC1YHR052W SSA4P22202 642 aaKnown RBP5.73□□□□□ -1.49
CIC1YHR052W LEM3P42838 414 aa5.73□□□□□ -1.49
CIC1YHR052W UBP5P39944 805 aa5.72□□□□□ -1.49
CIC1YHR052W NEO1P40527 1151 aa5.72□□□□□ -1.49
CIC1YHR052W RGD2P43556 714 aa5.72□□□□□ -1.49
CIC1YHR052W SPO71Q03868 1245 aa5.72□□□□□ -1.49
CIC1YHR052W PUF6Q04373 656 aaKnown RBP5.72□□□□□ -1.49
CIC1YHR052W ELG1Q12050 791 aa5.72□□□□□ -1.49
CIC1YHR052W RLF2Q12495 606 aa5.72□□□□□ -1.49
CIC1YHR052W KTR2P33550 425 aa5.71□□□□□ -1.5
CIC1YHR052W LRG1P35688 1017 aa5.71□□□□□ -1.5
CIC1YHR052W KIP3P53086 805 aaKnown RBP5.71□□□□□ -1.5
CIC1YHR052W GCD1P09032 578 aaPredicted RBP5.7□□□□□ -1.5
CIC1YHR052W SRS2P12954 1174 aa5.7□□□□□ -1.5
CIC1YHR052W SEG2P34250 1132 aa5.7□□□□□ -1.5
CIC1YHR052W YBR287WP38355 427 aa5.7□□□□□ -1.5
CIC1YHR052W YJR124CP47159 448 aa5.7□□□□□ -1.5
CIC1YHR052W SUT1P53032 299 aaKnown RBP5.7□□□□□ -1.5
CIC1YHR052W YML083CQ04526 418 aa5.7□□□□□ -1.5
CIC1YHR052W BOI1P38041 980 aaKnown RBP5.69□□□□□ -1.5
CIC1YHR052W YNR065CP53751 1116 aa5.69□□□□□ -1.5
CIC1YHR052W GIC2Q06648 383 aa5.69□□□□□ -1.5
CIC1YHR052W NOB1Q08444 459 aaKnown RBP5.69□□□□□ -1.5
CIC1YHR052W HAS1Q03532 505 aaKnown RBP5.68□□□□□ -1.5
CIC1YHR052W POL12P38121 705 aaPredicted RBP5.67□□□□□ -1.5
CIC1YHR052W CWC15Q03772 175 aaKnown RBP5.67□□□□□ -1.5
CIC1YHR052W TIF6Q12522 245 aaKnown RBP5.66□□□□□ -1.5
CIC1YHR052W RPB10P22139 70 aa5.65□□□□□ -1.5
CIC1YHR052W NTA1P40354 457 aa5.65□□□□□ -1.5
CIC1YHR052W GLO4Q12320 285 aa5.65□□□□□ -1.5
CIC1YHR052W HVG1P0CE11 249 aa5.64□□□□□ -1.51
CIC1YHR052W RAD55P38953 406 aa5.64□□□□□ -1.51
CIC1YHR052W PNP1Q05788 311 aa5.64□□□□□ -1.51
CIC1YHR052W SUB2Q07478 446 aaKnown RBP5.64□□□□□ -1.51
CIC1YHR052W APC11Q12157 165 aa5.64□□□□□ -1.51
CIC1YHR052W WHI3P34761 661 aaKnown RBP5.63□□□□□ -1.51
CIC1YHR052W PYC2P32327 1180 aaKnown RBP5.62□□□□□ -1.51
CIC1YHR052W YMR074CQ04773 145 aa5.62□□□□□ -1.51
CIC1YHR052W DFG16Q99234 619 aa5.62□□□□□ -1.51
CIC1YHR052W RRN6P32786 894 aa5.61□□□□□ -1.51
CIC1YHR052W GPT2P36148 743 aa5.61□□□□□ -1.51
CIC1YHR052W PSY2P40164 858 aa5.61□□□□□ -1.51
CIC1YHR052W MMM1P41800 426 aa5.61□□□□□ -1.51
CIC1YHR052W FAR11P53917 953 aa5.61□□□□□ -1.51
CIC1YHR052W IRS4P36115 615 aaKnown RBP5.6□□□□□ -1.51
CIC1YHR052W FET4P40988 552 aa5.6□□□□□ -1.51
CIC1YHR052W ECL1P48235 211 aa5.6□□□□□ -1.51
CIC1YHR052W GAS1P22146 559 aaKnown RBP5.59□□□□□ -1.51
CIC1YHR052W YOR223WQ12015 292 aa5.59□□□□□ -1.51
CIC1YHR052W YHL008CP38750 627 aa5.58□□□□□ -1.52
CIC1YHR052W NIT1P40447 199 aa5.58□□□□□ -1.52
CIC1YHR052W CIT3P43635 486 aa5.58□□□□□ -1.52
CIC1YHR052W SMC1P32908 1225 aa5.56□□□□□ -1.52
CIC1YHR052W YKL222CP35995 705 aa5.56□□□□□ -1.52
CIC1YHR052W RCM1P53972 490 aa5.56□□□□□ -1.52
CIC1YHR052W LSO1Q3E827 93 aa5.56□□□□□ -1.52
CIC1YHR052W YCR015CP25616 317 aa5.55□□□□□ -1.52
CIC1YHR052W HSP78P33416 811 aa5.55□□□□□ -1.52
CIC1YHR052W DOT1Q04089 582 aaKnown RBP5.55□□□□□ -1.52
CIC1YHR052W NSI1Q12457 570 aa5.55□□□□□ -1.52
CIC1YHR052W PRP43P53131 767 aaKnown RBP5.54□□□□□ -1.52
CIC1YHR052W CTR9P89105 1077 aa5.54□□□□□ -1.52
CIC1YHR052W BOL3P39724 118 aa5.53□□□□□ -1.52
CIC1YHR052W ESC8Q08119 714 aa5.53□□□□□ -1.52
CIC1YHR052W OYE3P41816 400 aaPredicted RBP5.52□□□□□ -1.53
CIC1YHR052W TAF1P46677 1066 aa5.52□□□□□ -1.53
CIC1YHR052W CDA2Q06703 312 aa5.52□□□□□ -1.53
CIC1YHR052W FUR4P05316 633 aaKnown RBP5.51□□□□□ -1.53
CIC1YHR052W SSA1P10591 642 aaKnown RBP5.51□□□□□ -1.53
CIC1YHR052W COBP00163 385 aa5.5□□□□□ -1.53
CIC1YHR052W RPS4AP0CX35 261 aaKnown RBP5.5□□□□□ -1.53
CIC1YHR052W RPS4BP0CX36 261 aaKnown RBP5.5□□□□□ -1.53
CIC1YHR052W TSA1P34760 196 aaKnown RBP5.5□□□□□ -1.53
CIC1YHR052W RPL34AP87262 121 aaPredicted RBP5.5□□□□□ -1.53
CIC1YHR052W EAR1Q03212 550 aa5.5□□□□□ -1.53
CIC1YHR052W YOR059CQ08448 450 aaKnown RBP5.5□□□□□ -1.53
CIC1YHR052W DUR3P33413 735 aa5.49□□□□□ -1.53
CIC1YHR052W GCV1P48015 400 aa5.49□□□□□ -1.53
CIC1YHR052W ALG6Q12001 544 aaKnown RBP5.49□□□□□ -1.53
CIC1YHR052W YLL054CQ12244 843 aa5.49□□□□□ -1.53
CIC1YHR052W NPR1P22211 790 aa5.48□□□□□ -1.53
CIC1YHR052W YIG1Q08956 461 aa5.48□□□□□ -1.53
CIC1YHR052W CMR1Q12510 522 aaKnown RBP5.48□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms