RNA–Protein interactions for RNA: YGR247W

CPD1, Transcript of Cyclic nucleotide phosphodiesterase, yeastyeast

Gene CPD1, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPD1YGR247W BOI1P38041 980 aaKnown RBP10.98□□□□□ -0.65
CPD1YGR247W VPS27P40343 622 aaKnown RBP10.98□□□□□ -0.65
CPD1YGR247W SUB2Q07478 446 aaKnown RBP10.98□□□□□ -0.65
CPD1YGR247W ICL2Q12031 575 aa10.98□□□□□ -0.65
CPD1YGR247W DIT2P21595 489 aa10.97□□□□□ -0.65
CPD1YGR247W RPN7Q06103 429 aaKnown RBP10.97□□□□□ -0.65
CPD1YGR247W ECM30Q06673 1274 aa10.97□□□□□ -0.65
CPD1YGR247W YDL124WQ07551 312 aaKnown RBP10.97□□□□□ -0.65
CPD1YGR247W FIR1P40020 876 aa10.96□□□□□ -0.65
CPD1YGR247W DLD1P32891 587 aa10.95□□□□□ -0.66
CPD1YGR247W WHI3P34761 661 aaKnown RBP10.95□□□□□ -0.66
CPD1YGR247W YJL007CP47080 104 aa10.95□□□□□ -0.66
CPD1YGR247W HGH1P48362 394 aaKnown RBP10.95□□□□□ -0.66
CPD1YGR247W PER1P25625 357 aa10.94□□□□□ -0.66
CPD1YGR247W YFL040WP43562 540 aa10.94□□□□□ -0.66
CPD1YGR247W YOR131CQ12486 218 aa10.94□□□□□ -0.66
CPD1YGR247W YPR117WQ06116 2489 aa10.94□□□□□ -0.66
CPD1YGR247W VPS13Q07878 3144 aa10.93□□□□□ -0.66
CPD1YGR247W DAL5P15365 543 aa10.93□□□□□ -0.66
CPD1YGR247W SPB4P25808 606 aaPredicted RBP10.93□□□□□ -0.66
CPD1YGR247W CST26P38226 397 aa10.93□□□□□ -0.66
CPD1YGR247W MXR1P40029 184 aa10.93□□□□□ -0.66
CPD1YGR247W AIM21P40563 679 aa10.93□□□□□ -0.66
CPD1YGR247W KEL3Q08979 651 aaPredicted RBP10.93□□□□□ -0.66
CPD1YGR247W MPH3P0CE00 602 aa10.92□□□□□ -0.66
CPD1YGR247W PKC1P24583 1151 aa10.92□□□□□ -0.66
CPD1YGR247W GRX7P38068 203 aa10.92□□□□□ -0.66
CPD1YGR247W YPL034WQ03083 165 aa10.92□□□□□ -0.66
CPD1YGR247W ERG12P07277 443 aa10.91□□□□□ -0.66
CPD1YGR247W PRY3P47033 881 aa10.91□□□□□ -0.66
CPD1YGR247W UBX5Q06682 500 aa10.91□□□□□ -0.66
CPD1YGR247W CDC45Q08032 650 aa10.91□□□□□ -0.66
CPD1YGR247W MET7Q08645 548 aa10.91□□□□□ -0.66
CPD1YGR247W LAP2Q10740 671 aa10.91□□□□□ -0.66
CPD1YGR247W SUT2Q12286 268 aa10.91□□□□□ -0.66
CPD1YGR247W PRE10P21242 288 aaKnown RBP RIP-Chip data10.9□□□□□ -0.66not detected
CPD1YGR247W EUG1P32474 517 aa10.9□□□□□ -0.66
CPD1YGR247W GCD7P32502 381 aaPredicted RBP10.9□□□□□ -0.66
CPD1YGR247W UIP5P36137 443 aa10.9□□□□□ -0.66
CPD1YGR247W TIF4631P39935 952 aaKnown RBP10.9□□□□□ -0.66
CPD1YGR247W FMP30Q02883 468 aa10.9□□□□□ -0.66
CPD1YGR247W GEF1P37020 779 aa10.89□□□□□ -0.67
CPD1YGR247W YNG2P38806 282 aaKnown RBP10.89□□□□□ -0.67
CPD1YGR247W FUN12P39730 1002 aaKnown RBP10.89□□□□□ -0.67
CPD1YGR247W MDM20Q12387 796 aaKnown RBP10.89□□□□□ -0.67
CPD1YGR247W KRS1P15180 591 aaKnown RBP10.88□□□□□ -0.67
CPD1YGR247W VMA2P16140 517 aaKnown RBP10.88□□□□□ -0.67
CPD1YGR247W NPL4P33755 580 aa10.88□□□□□ -0.67
CPD1YGR247W BRE5P53741 515 aaKnown RBP10.88□□□□□ -0.67
CPD1YGR247W NCB2Q92317 146 aa10.88□□□□□ -0.67
CPD1YGR247W PRE8P23639 250 aa10.87□□□□□ -0.67
CPD1YGR247W GPB2P39717 880 aa10.87□□□□□ -0.67
CPD1YGR247W YJR107WP47145 328 aa10.87□□□□□ -0.67
CPD1YGR247W YAF9P53930 226 aa10.87□□□□□ -0.67
CPD1YGR247W YML037CQ03703 340 aa10.87□□□□□ -0.67
CPD1YGR247W YIL092WP40497 633 aa10.86□□□□□ -0.67
CPD1YGR247W SPO1P53541 631 aa10.86□□□□□ -0.67
CPD1YGR247W NAB6Q03735 1134 aaKnown RBP RIP-Chip data10.86□□□□□ -0.67not detected
CPD1YGR247W YPL260WQ08977 551 aa10.86□□□□□ -0.67
CPD1YGR247W MAM3Q12296 706 aa10.86□□□□□ -0.67
CPD1YGR247W AFG3P39925 761 aa10.85□□□□□ -0.67
CPD1YGR247W YRB30P53107 440 aaPredicted RBP10.85□□□□□ -0.67
CPD1YGR247W SRM1P21827 482 aa10.84□□□□□ -0.67
CPD1YGR247W RGT1P32862 1170 aa10.84□□□□□ -0.67
CPD1YGR247W RVB2Q12464 471 aaKnown RBP10.84□□□□□ -0.67
CPD1YGR247W IOC3P43596 787 aa10.83□□□□□ -0.68
CPD1YGR247W YGL242CP53066 181 aa10.83□□□□□ -0.68
CPD1YGR247W TUS1Q06412 1307 aa10.83□□□□□ -0.68
CPD1YGR247W KTR3P38130 404 aaPredicted RBP10.82□□□□□ -0.68
CPD1YGR247W KSP1P38691 1029 aaKnown RBP10.82□□□□□ -0.68
CPD1YGR247W DUS4Q06063 367 aa10.82□□□□□ -0.68
CPD1YGR247W YKR018CP36114 725 aa10.81□□□□□ -0.68
CPD1YGR247W IRC8P47046 822 aa10.81□□□□□ -0.68
CPD1YGR247W SKG3Q06315 1026 aa10.81□□□□□ -0.68
CPD1YGR247W AHC1Q12433 566 aa10.81□□□□□ -0.68
CPD1YGR247W CDC19P00549 500 aaKnown RBP10.8□□□□□ -0.68
CPD1YGR247W BCS1P32839 456 aa10.8□□□□□ -0.68
CPD1YGR247W SOL4P53315 255 aa10.8□□□□□ -0.68
CPD1YGR247W MSC7P38694 644 aa10.79□□□□□ -0.68
CPD1YGR247W TOM71P38825 639 aaKnown RBP10.79□□□□□ -0.68
CPD1YGR247W YMR084WA2P2R3 262 aa10.78□□□□□ -0.68
CPD1YGR247W MLC1P53141 149 aa10.78□□□□□ -0.68
CPD1YGR247W ALD6P54115 500 aaKnown RBP10.78□□□□□ -0.68
CPD1YGR247W RAD2P07276 1031 aa10.77□□□□□ -0.69
CPD1YGR247W DBP1P24784 617 aaKnown RBP10.77□□□□□ -0.69
CPD1YGR247W SRP40P32583 406 aaPredicted RBP10.77□□□□□ -0.69
CPD1YGR247W ENP2P48234 707 aaKnown RBP10.77□□□□□ -0.69
CPD1YGR247W YGR125WP53273 1036 aa10.77□□□□□ -0.69
CPD1YGR247W BUL2Q03758 920 aaKnown RBP10.77□□□□□ -0.69
CPD1YGR247W UTR4P32626 227 aa10.76□□□□□ -0.69
CPD1YGR247W KTR2P33550 425 aa10.76□□□□□ -0.69
CPD1YGR247W AVT3P36062 692 aa10.76□□□□□ -0.69
CPD1YGR247W RTS1P38903 757 aa10.76□□□□□ -0.69
CPD1YGR247W ILV3P39522 585 aaKnown RBP10.76□□□□□ -0.69
CPD1YGR247W YMR147WP40218 223 aaKnown RBP10.76□□□□□ -0.69
CPD1YGR247W EPS1P40557 701 aa10.76□□□□□ -0.69
CPD1YGR247W PTK2P47116 818 aaKnown RBP10.76□□□□□ -0.69
CPD1YGR247W ALO1P54783 526 aaKnown RBP10.76□□□□□ -0.69
CPD1YGR247W KAR5Q04746 504 aa10.76□□□□□ -0.69
CPD1YGR247W NOT3P06102 836 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 5,963 RNA–protein pairs in 65.7 ms