RNA–Protein interactions for RNA: YGR020C

VMA7, Transcript of Subunit F of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA7, Length 357 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA7	YGR020C	ALD3	P54114	506 aa		6.33	□□□□□ -1.4
VMA7	YGR020C	BSC2	Q05611	235 aa		6.33	□□□□□ -1.4
VMA7	YGR020C	ECM2	P38241	364 aa	Known RBP	6.32	□□□□□ -1.4
VMA7	YGR020C	BIO5	P53744	561 aa	Known RBP	6.32	□□□□□ -1.4
VMA7	YGR020C	SEN54	Q02825	467 aa	Predicted RBP	6.32	□□□□□ -1.4
VMA7	YGR020C	NOP8	Q08287	484 aa	Predicted RBP	6.32	□□□□□ -1.4
VMA7	YGR020C	MCX1	P38323	520 aa	Predicted RBP	6.31	□□□□□ -1.4
VMA7	YGR020C	IPL1	P38991	367 aa		6.31	□□□□□ -1.4
VMA7	YGR020C	SOK2	P53438	785 aa	Predicted RBP	6.31	□□□□□ -1.4
VMA7	YGR020C	CTR9	P89105	1077 aa		6.31	□□□□□ -1.4
VMA7	YGR020C	SOG2	Q08817	791 aa		6.31	□□□□□ -1.4
VMA7	YGR020C	SLP1	Q12232	587 aa		6.31	□□□□□ -1.4
VMA7	YGR020C	TFA2	P36145	328 aa		6.3	□□□□□ -1.4
VMA7	YGR020C	YHL008C	P38750	627 aa		6.3	□□□□□ -1.4
VMA7	YGR020C	GIP2	P40036	548 aa		6.3	□□□□□ -1.4
VMA7	YGR020C	THI12	P42883	340 aa		6.3	□□□□□ -1.4
VMA7	YGR020C	THI5	P43534	340 aa		6.3	□□□□□ -1.4
VMA7	YGR020C	THI11	P47183	340 aa		6.3	□□□□□ -1.4
VMA7	YGR020C	GUP1	P53154	560 aa		6.3	□□□□□ -1.4
VMA7	YGR020C	THI13	Q07748	340 aa		6.3	□□□□□ -1.4
VMA7	YGR020C	SAM37	P50110	327 aa		6.29	□□□□□ -1.4
VMA7	YGR020C	YMR187C	Q03236	431 aa		6.29	□□□□□ -1.4
VMA7	YGR020C	YPR053C	Q6Q5F3	151 aa		6.29	□□□□□ -1.4
VMA7	YGR020C	COB	P00163	385 aa		6.28	□□□□□ -1.4
VMA7	YGR020C	TED1	P40533	473 aa		6.28	□□□□□ -1.4
VMA7	YGR020C	LEM3	P42838	414 aa		6.28	□□□□□ -1.4
VMA7	YGR020C	NOC3	Q07896	663 aa	Predicted RBP	6.28	□□□□□ -1.4
VMA7	YGR020C	INP54	Q08227	384 aa	Known RBP	6.28	□□□□□ -1.4
VMA7	YGR020C	GLO4	Q12320	285 aa		6.28	□□□□□ -1.4
VMA7	YGR020C	WHI5	Q12416	295 aa		6.28	□□□□□ -1.4
VMA7	YGR020C	FLP1	P03870	423 aa		6.27	□□□□□ -1.41
VMA7	YGR020C	MET4	P32389	672 aa		6.27	□□□□□ -1.41
VMA7	YGR020C	YJR124C	P47159	448 aa		6.27	□□□□□ -1.41
VMA7	YGR020C	TY4B-P	A0A0B7P3V8	1104 aa		6.26	□□□□□ -1.41
VMA7	YGR020C	GCD6	P32501	712 aa	Known RBP	6.26	□□□□□ -1.41
VMA7	YGR020C	DUR3	P33413	735 aa		6.26	□□□□□ -1.41
VMA7	YGR020C	AMN1	P38285	549 aa	Predicted RBP	6.26	□□□□□ -1.41
VMA7	YGR020C	RRM3	P38766	723 aa		6.26	□□□□□ -1.41
VMA7	YGR020C	CIC1	P38779	376 aa	Known RBP	6.26	□□□□□ -1.41
VMA7	YGR020C	LSB3	P43603	459 aa	Known RBP	6.26	□□□□□ -1.41
VMA7	YGR020C	YNR065C	P53751	1116 aa		6.26	□□□□□ -1.41
VMA7	YGR020C	TY4A-H	Q6Q5P6	413 aa		6.26	□□□□□ -1.41
VMA7	YGR020C	PHO4	P07270	312 aa	Known RBP	6.25	□□□□□ -1.41
VMA7	YGR020C	HVG1	P0CE11	249 aa		6.25	□□□□□ -1.41
VMA7	YGR020C	NEO1	P40527	1151 aa		6.25	□□□□□ -1.41
VMA7	YGR020C	LSB6	P42951	607 aa		6.25	□□□□□ -1.41
VMA7	YGR020C	MSH6	Q03834	1242 aa		6.25	□□□□□ -1.41
VMA7	YGR020C	YDR215C	Q12240	137 aa		6.25	□□□□□ -1.41
VMA7	YGR020C	RIM11	P38615	370 aa		6.24	□□□□□ -1.41
VMA7	YGR020C	PAN5	P38787	379 aa		6.24	□□□□□ -1.41
VMA7	YGR020C	FET4	P40988	552 aa		6.24	□□□□□ -1.41
VMA7	YGR020C	BUD9	P53226	547 aa		6.24	□□□□□ -1.41
VMA7	YGR020C	NPR1	P22211	790 aa		6.23	□□□□□ -1.41
VMA7	YGR020C	YCK2	P23292	546 aa	Known RBP	6.23	□□□□□ -1.41
VMA7	YGR020C	VPS35	P34110	944 aa		6.23	□□□□□ -1.41
VMA7	YGR020C	SKN7	P38889	622 aa		6.23	□□□□□ -1.41
VMA7	YGR020C	SLN1	P39928	1220 aa	Predicted RBP	6.23	□□□□□ -1.41
VMA7	YGR020C	NUT1	P53114	1132 aa		6.23	□□□□□ -1.41
VMA7	YGR020C	HAS1	Q03532	505 aa	Known RBP	6.23	□□□□□ -1.41
VMA7	YGR020C	SPO71	Q03868	1245 aa		6.23	□□□□□ -1.41
VMA7	YGR020C	CMR1	Q12510	522 aa	Known RBP	6.23	□□□□□ -1.41
VMA7	YGR020C	SAC7	P17121	654 aa		6.22	□□□□□ -1.41
VMA7	YGR020C	HEM3	P28789	327 aa		6.22	□□□□□ -1.41
VMA7	YGR020C	PRY1	P47032	299 aa		6.22	□□□□□ -1.41
VMA7	YGR020C	CCT8	P47079	568 aa	Known RBP	6.22	□□□□□ -1.41
VMA7	YGR020C	DSE4	P53753	1117 aa		6.22	□□□□□ -1.41
VMA7	YGR020C	YCS4	Q06156	1176 aa		6.22	□□□□□ -1.41
VMA7	YGR020C	GAS5	Q08193	484 aa		6.22	□□□□□ -1.41
VMA7	YGR020C	TAT1	P38085	619 aa		6.21	□□□□□ -1.42
VMA7	YGR020C	DAK2	P43550	591 aa		6.21	□□□□□ -1.42
VMA7	YGR020C	SAP155	P43612	1002 aa		6.21	□□□□□ -1.42
VMA7	YGR020C	MON1	P53129	644 aa		6.21	□□□□□ -1.42
VMA7	YGR020C	PMT7	Q06644	662 aa		6.21	□□□□□ -1.42
VMA7	YGR020C	PRP5	P21372	849 aa	Predicted RBP	6.2	□□□□□ -1.42
VMA7	YGR020C	RVS167	P39743	482 aa	Known RBP	6.2	□□□□□ -1.42
VMA7	YGR020C	POL5	P39985	1022 aa	Known RBP	6.2	□□□□□ -1.42
VMA7	YGR020C	AI3	P03877	415 aa		6.19	□□□□□ -1.42
VMA7	YGR020C	MCM5	P29496	775 aa	Known RBP	6.19	□□□□□ -1.42
VMA7	YGR020C	SFA1	P32771	386 aa		6.19	□□□□□ -1.42
VMA7	YGR020C	OXR1	Q08952	273 aa		6.19	□□□□□ -1.42
VMA7	YGR020C	RPT1	P33299	467 aa	Known RBP	6.18	□□□□□ -1.42
VMA7	YGR020C	MAE1	P36013	669 aa	Known RBP	6.18	□□□□□ -1.42
VMA7	YGR020C	POL32	P47110	350 aa		6.18	□□□□□ -1.42
VMA7	YGR020C	YAF9	P53930	226 aa		6.18	□□□□□ -1.42
VMA7	YGR020C	ELG1	Q12050	791 aa		6.18	□□□□□ -1.42
VMA7	YGR020C	PRP40	P33203	583 aa	Known RBP	6.17	□□□□□ -1.42
VMA7	YGR020C	DAL4	Q04895	635 aa		6.17	□□□□□ -1.42
VMA7	YGR020C	MCA1	Q08601	432 aa		6.17	□□□□□ -1.42
VMA7	YGR020C	TY1A-NL1	Q12391	440 aa	Known RBP	6.17	□□□□□ -1.42
VMA7	YGR020C	HTS1	P07263	546 aa	Known RBP	6.16	□□□□□ -1.42
VMA7	YGR020C	RSC6	P25632	483 aa		6.16	□□□□□ -1.42
VMA7	YGR020C	KAR2	P16474	682 aa	Known RBP	6.15	□□□□□ -1.42
VMA7	YGR020C	MGE1	P38523	228 aa		6.15	□□□□□ -1.42
VMA7	YGR020C	ARI1	P53111	347 aa	Known RBP	6.15	□□□□□ -1.42
VMA7	YGR020C	FAR11	P53917	953 aa		6.15	□□□□□ -1.42
VMA7	YGR020C	YIG1	Q08956	461 aa		6.15	□□□□□ -1.42
VMA7	YGR020C	ATE1	P16639	503 aa		6.14	□□□□□ -1.43
VMA7	YGR020C	ERS1	P17261	260 aa		6.14	□□□□□ -1.43
VMA7	YGR020C	YMR074C	Q04773	145 aa		6.14	□□□□□ -1.43
VMA7	YGR020C	TOS4	Q06266	489 aa		6.14	□□□□□ -1.43

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms