RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeastyeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
XRN1YGL173C FAF1P40546 346 aaPredicted RBP3.81□□□□□ -1.8
XRN1YGL173C OYE2Q03558 400 aaKnown RBP3.81□□□□□ -1.8
XRN1YGL173C DUT1P33317 147 aa3.81□□□□□ -1.8
XRN1YGL173C KTR2P33550 425 aa3.81□□□□□ -1.8
XRN1YGL173C MRP8P35719 219 aa3.81□□□□□ -1.8
XRN1YGL173C ZDS1P50111 915 aaKnown RBP3.81□□□□□ -1.8
XRN1YGL173C SVL3Q03088 825 aaKnown RBP3.81□□□□□ -1.8
XRN1YGL173C YPQ2Q06328 317 aa3.81□□□□□ -1.8
XRN1YGL173C RPP2BP02400 110 aaKnown RBP3.8□□□□□ -1.8
XRN1YGL173C ESS1P22696 170 aa3.8□□□□□ -1.8
XRN1YGL173C ARG8P18544 423 aa3.8□□□□□ -1.8
XRN1YGL173C ARL1P38116 183 aaKnown RBP3.8□□□□□ -1.8
XRN1YGL173C NOC2P39744 710 aaKnown RBP3.8□□□□□ -1.8
XRN1YGL173C NTA1P40354 457 aa3.8□□□□□ -1.8
XRN1YGL173C YOR131CQ12486 218 aa3.8□□□□□ -1.8
XRN1YGL173C SEC23P15303 768 aaKnown RBP3.8□□□□□ -1.8
XRN1YGL173C HXT5P38695 592 aa3.8□□□□□ -1.8
XRN1YGL173C PMC1P38929 1173 aaPredicted RBP3.8□□□□□ -1.8
XRN1YGL173C DUG1P43616 481 aaKnown RBP3.8□□□□□ -1.8
XRN1YGL173C PMT3P47190 753 aa3.8□□□□□ -1.8
XRN1YGL173C OXR1Q08952 273 aa3.8□□□□□ -1.8
XRN1YGL173C TYW1Q08960 810 aaKnown RBP3.8□□□□□ -1.8
XRN1YGL173C MDM12Q92328 271 aa3.8□□□□□ -1.8
XRN1YGL173C HSE1P38753 452 aa3.8□□□□□ -1.8
XRN1YGL173C DPL1Q05567 589 aa3.8□□□□□ -1.8
XRN1YGL173C YJU3P28321 313 aa3.79□□□□□ -1.8
XRN1YGL173C MCM5P29496 775 aaKnown RBP3.79□□□□□ -1.8
XRN1YGL173C SRP40P32583 406 aaPredicted RBP3.79□□□□□ -1.8
XRN1YGL173C NFU1P32860 256 aa3.79□□□□□ -1.8
XRN1YGL173C ILV3P39522 585 aaKnown RBP3.79□□□□□ -1.8
XRN1YGL173C UTP8P53276 713 aaKnown RBP3.79□□□□□ -1.8
XRN1YGL173C GEA1P47102 1408 aaPredicted RBP3.79□□□□□ -1.8
XRN1YGL173C TRP5P00931 707 aaKnown RBP3.79□□□□□ -1.8
XRN1YGL173C PRE9P23638 258 aaKnown RBP3.79□□□□□ -1.8
XRN1YGL173C MGS1P40151 587 aa3.79□□□□□ -1.8
XRN1YGL173C IMH1Q06704 911 aaKnown RBP3.79□□□□□ -1.8
XRN1YGL173C PET112P33893 541 aa3.79□□□□□ -1.8
XRN1YGL173C FIG4P42837 879 aa3.79□□□□□ -1.8
XRN1YGL173C PEX8P53248 589 aa3.79□□□□□ -1.8
XRN1YGL173C ECM23Q02710 187 aa3.79□□□□□ -1.8
XRN1YGL173C RKM2Q03942 479 aa3.79□□□□□ -1.8
XRN1YGL173C YRF1-2P40105 1681 aa3.79□□□□□ -1.8
XRN1YGL173C MAP2P38174 421 aaKnown RBP3.78□□□□□ -1.8
XRN1YGL173C MAK10Q02197 733 aa3.78□□□□□ -1.8
XRN1YGL173C RTT10Q08924 1013 aa3.78□□□□□ -1.8
XRN1YGL173C WRS1Q12109 432 aaKnown RBP3.78□□□□□ -1.8
XRN1YGL173C TY3B-IQ7LHG5 1498 aaKnown RBP3.78□□□□□ -1.8
XRN1YGL173C DAK2P43550 591 aa3.78□□□□□ -1.8
XRN1YGL173C PBP1P53297 722 aaKnown RBP3.78□□□□□ -1.8
XRN1YGL173C MET1P36150 593 aa3.78□□□□□ -1.8
XRN1YGL173C UBX7P38349 436 aa3.78□□□□□ -1.8
XRN1YGL173C SIT1P39980 628 aa3.78□□□□□ -1.8
XRN1YGL173C IML1P47170 1584 aa3.78□□□□□ -1.8
XRN1YGL173C GRS1P38088 690 aaKnown RBP3.78□□□□□ -1.8
XRN1YGL173C YBR197CP38306 217 aa3.78□□□□□ -1.8
XRN1YGL173C RPT2P40327 437 aaKnown RBP3.78□□□□□ -1.8
XRN1YGL173C IRR1P40541 1150 aa3.78□□□□□ -1.8
XRN1YGL173C JSN1P47135 1091 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
XRN1YGL173C UBX4P54730 416 aa3.78□□□□□ -1.8
XRN1YGL173C NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
XRN1YGL173C CAB1Q04430 367 aa3.78□□□□□ -1.8
XRN1YGL173C YSP2Q06681 1438 aa3.78□□□□□ -1.81
XRN1YGL173C KRE33P53914 1056 aaKnown RBP3.77□□□□□ -1.81
XRN1YGL173C ADI1Q03677 179 aa3.77□□□□□ -1.81
XRN1YGL173C ALR1Q08269 859 aa3.77□□□□□ -1.81
XRN1YGL173C YBR238CP38330 731 aaKnown RBP3.77□□□□□ -1.81
XRN1YGL173C FYV10P40492 516 aa3.77□□□□□ -1.81
XRN1YGL173C YJR142WP47173 342 aa3.77□□□□□ -1.81
XRN1YGL173C SKP1P52286 194 aa3.77□□□□□ -1.81
XRN1YGL173C TMA7Q3E764 64 aaKnown RBP3.77□□□□□ -1.81
XRN1YGL173C APM4Q99186 491 aa3.77□□□□□ -1.81
XRN1YGL173C THS1P04801 734 aaKnown RBP3.77□□□□□ -1.81
XRN1YGL173C RPP1AP05318 106 aaPredicted RBP3.77□□□□□ -1.81
XRN1YGL173C GAL11P19659 1081 aa3.77□□□□□ -1.81
XRN1YGL173C YNR029CP53729 429 aaKnown RBP3.77□□□□□ -1.81
XRN1YGL173C SIW14P53965 281 aa3.77□□□□□ -1.81
XRN1YGL173C BUD21Q08492 214 aaPredicted RBP3.77□□□□□ -1.81
XRN1YGL173C CMR1Q12510 522 aaKnown RBP3.77□□□□□ -1.81
XRN1YGL173C RED1P14291 827 aa3.77□□□□□ -1.81
XRN1YGL173C MRT4P33201 236 aaKnown RBP3.77□□□□□ -1.81
XRN1YGL173C PBY1P38254 753 aa3.77□□□□□ -1.81
XRN1YGL173C MNN1P39106 762 aa3.77□□□□□ -1.81
XRN1YGL173C MAD1P40957 749 aa3.77□□□□□ -1.81
XRN1YGL173C MDG1P53885 366 aa3.77□□□□□ -1.81
XRN1YGL173C YCS4Q06156 1176 aa3.77□□□□□ -1.81
XRN1YGL173C BUD31P25337 157 aaPredicted RBP3.76□□□□□ -1.81
XRN1YGL173C CDC11P32458 415 aa3.76□□□□□ -1.81
XRN1YGL173C YKL091CP33324 310 aaKnown RBP3.76□□□□□ -1.81
XRN1YGL173C PTH2P34222 208 aa3.76□□□□□ -1.81
XRN1YGL173C IES1P43579 692 aa3.76□□□□□ -1.81
XRN1YGL173C BNI4P53858 892 aa3.76□□□□□ -1.81
XRN1YGL173C YOR378WQ08902 515 aa3.76□□□□□ -1.81
XRN1YGL173C SEC6P32844 805 aa3.76□□□□□ -1.81
XRN1YGL173C GLO3P38682 493 aaKnown RBP3.76□□□□□ -1.81
XRN1YGL173C NMD3P38861 518 aaKnown RBP3.76□□□□□ -1.81
XRN1YGL173C LCB5Q06147 687 aaKnown RBP3.76□□□□□ -1.81
XRN1YGL173C PUN1Q06991 263 aa3.76□□□□□ -1.81
XRN1YGL173C FLP1P03870 423 aa3.76□□□□□ -1.81
XRN1YGL173C MOD5P07884 428 aa3.76□□□□□ -1.81
XRN1YGL173C IRS4P36115 615 aaKnown RBP3.76□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms