RNA–Protein interactions for RNA: YGL098W

USE1, Transcript of Essential SNARE protein localized to the ER, yeastyeast

Gene USE1, Length 738 nt, Biotype protein coding, Subcellular localisation Cell cortex, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USE1YGL098W SAP1P39955 897 aaKnown RBP3.71□□□□□ -1.82
USE1YGL098W HST1P53685 503 aa3.71□□□□□ -1.82
USE1YGL098W HST2P53686 357 aa3.71□□□□□ -1.82
USE1YGL098W AIM7Q12156 149 aa3.71□□□□□ -1.82
USE1YGL098W YLL054CQ12244 843 aa3.71□□□□□ -1.82
USE1YGL098W DNF1P32660 1571 aa3.71□□□□□ -1.82
USE1YGL098W RAD50P12753 1312 aa3.7□□□□□ -1.82
USE1YGL098W ARG8P18544 423 aa3.7□□□□□ -1.82
USE1YGL098W SEC14P24280 304 aaKnown RBP3.7□□□□□ -1.82
USE1YGL098W PUP2P32379 260 aa3.7□□□□□ -1.82
USE1YGL098W CDC11P32458 415 aa3.7□□□□□ -1.82
USE1YGL098W MFT1P33441 392 aaKnown RBP3.7□□□□□ -1.82
USE1YGL098W SLD2P34252 453 aa3.7□□□□□ -1.82
USE1YGL098W MPE1P35728 441 aaKnown RBP3.7□□□□□ -1.82
USE1YGL098W RFC1P38630 861 aaKnown RBP3.7□□□□□ -1.82
USE1YGL098W RVS167P39743 482 aaKnown RBP3.7□□□□□ -1.82
USE1YGL098W RSC8P43609 557 aaKnown RBP3.7□□□□□ -1.82
USE1YGL098W POL32P47110 350 aa3.7□□□□□ -1.82
USE1YGL098W VID30P53076 958 aa3.7□□□□□ -1.82
USE1YGL098W ARP5P53946 755 aa3.7□□□□□ -1.82
USE1YGL098W ALD3P54114 506 aa3.7□□□□□ -1.82
USE1YGL098W NDL1Q06568 189 aa3.7□□□□□ -1.82
USE1YGL098W YOR389WQ08912 624 aa3.7□□□□□ -1.82
USE1YGL098W HIF1Q12373 385 aa3.7□□□□□ -1.82
USE1YGL098W ROM2P51862 1356 aaKnown RBP3.7□□□□□ -1.82
USE1YGL098W GDB1Q06625 1536 aa3.7□□□□□ -1.82
USE1YGL098W TY3B-IQ7LHG5 1498 aaKnown RBP3.69□□□□□ -1.82
USE1YGL098W TY4B-PA0A0B7P3V8 1104 aa3.69□□□□□ -1.82
USE1YGL098W CDC19P00549 500 aaKnown RBP3.69□□□□□ -1.82
USE1YGL098W MRPS28P21771 286 aa3.69□□□□□ -1.82
USE1YGL098W MSH1P25846 959 aa3.69□□□□□ -1.82
USE1YGL098W TOA1P32773 286 aa3.69□□□□□ -1.82
USE1YGL098W MRPL10P36520 322 aa3.69□□□□□ -1.82
USE1YGL098W SBE2P42223 864 aaKnown RBP3.69□□□□□ -1.82
USE1YGL098W CIR1P42940 261 aa3.69□□□□□ -1.82
USE1YGL098W SPO19Q03029 223 aa3.69□□□□□ -1.82
USE1YGL098W PUF6Q04373 656 aaKnown RBP3.69□□□□□ -1.82
USE1YGL098W PEX19Q07418 342 aa3.69□□□□□ -1.82
USE1YGL098W TLG2Q08144 397 aa3.69□□□□□ -1.82
USE1YGL098W GLE1Q12315 538 aa3.69□□□□□ -1.82
USE1YGL098W NUP145P49687 1317 aa3.69□□□□□ -1.82
USE1YGL098W BIK1P11709 440 aa3.68□□□□□ -1.82
USE1YGL098W DAL5P15365 543 aa3.68□□□□□ -1.82
USE1YGL098W CDC3P32457 520 aaKnown RBP3.68□□□□□ -1.82
USE1YGL098W MAC1P35192 417 aa3.68□□□□□ -1.82
USE1YGL098W EXO84P38261 753 aa3.68□□□□□ -1.82
USE1YGL098W AMN1P38285 549 aaPredicted RBP3.68□□□□□ -1.82
USE1YGL098W TOM71P38825 639 aaKnown RBP3.68□□□□□ -1.82
USE1YGL098W PEA2P40091 420 aa3.68□□□□□ -1.82
USE1YGL098W RRT14P40470 206 aa3.68□□□□□ -1.82
USE1YGL098W HYR1P40581 163 aaKnown RBP3.68□□□□□ -1.82
USE1YGL098W IAH1P41734 238 aa3.68□□□□□ -1.82
USE1YGL098W PRP31P49704 494 aaPredicted RBP3.68□□□□□ -1.82
USE1YGL098W JJJ1P53863 590 aa3.68□□□□□ -1.82
USE1YGL098W TIM50Q02776 476 aa3.68□□□□□ -1.82
USE1YGL098W NHA1Q99271 985 aa3.68□□□□□ -1.82
USE1YGL098W YCK2P23292 546 aaKnown RBP3.67□□□□□ -1.82
USE1YGL098W DPH5P32469 300 aaPredicted RBP3.67□□□□□ -1.82
USE1YGL098W EFB1P32471 206 aaKnown RBP3.67□□□□□ -1.82
USE1YGL098W OLA1P38219 394 aaKnown RBP3.67□□□□□ -1.82
USE1YGL098W RSC30P38781 883 aa3.67□□□□□ -1.82
USE1YGL098W YIL092WP40497 633 aa3.67□□□□□ -1.82
USE1YGL098W EMW1P42842 904 aaKnown RBP3.67□□□□□ -1.82
USE1YGL098W YGL081WP53156 320 aa3.67□□□□□ -1.82
USE1YGL098W DNM1P54861 757 aa3.67□□□□□ -1.82
USE1YGL098W TFB3Q03290 321 aa3.67□□□□□ -1.82
USE1YGL098W ORM2Q06144 216 aa3.67□□□□□ -1.82
USE1YGL098W ARR1Q06596 294 aa3.67□□□□□ -1.82
USE1YGL098W BUD21Q08492 214 aaPredicted RBP3.67□□□□□ -1.82
USE1YGL098W YPL225WQ08971 146 aaKnown RBP3.67□□□□□ -1.82
USE1YGL098W RAD59Q12223 238 aa3.67□□□□□ -1.82
USE1YGL098W SMC6Q12749 1114 aa3.67□□□□□ -1.82
USE1YGL098W YKL068W-AQ3E826 78 aa3.67□□□□□ -1.82
USE1YGL098W TY4A-HQ6Q5P6 413 aa3.67□□□□□ -1.82
USE1YGL098W YRF1-4O13559 1382 aa3.66□□□□□ -1.82
USE1YGL098W YML133CQ03099 1374 aa3.66□□□□□ -1.82
USE1YGL098W YLL067CQ07888 1374 aa3.66□□□□□ -1.82
USE1YGL098W YLL066CQ99208 1374 aa3.66□□□□□ -1.82
USE1YGL098W ESC1Q03661 1658 aaKnown RBP3.66□□□□□ -1.82
USE1YGL098W CDC37P06101 506 aaKnown RBP3.66□□□□□ -1.82
USE1YGL098W SSA1P10591 642 aaKnown RBP3.66□□□□□ -1.82
USE1YGL098W SSA2P10592 639 aaKnown RBP3.66□□□□□ -1.82
USE1YGL098W PDI1P17967 522 aaKnown RBP3.66□□□□□ -1.82
USE1YGL098W MNR2P35724 969 aa3.66□□□□□ -1.82
USE1YGL098W PET100P38958 111 aa3.66□□□□□ -1.82
USE1YGL098W BUB1P41695 1021 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
USE1YGL098W SEC26P41810 973 aaKnown RBP3.66□□□□□ -1.82
USE1YGL098W JSN1P47135 1091 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
USE1YGL098W CWH41P53008 833 aa3.66□□□□□ -1.82
USE1YGL098W KRE33P53914 1056 aaKnown RBP3.66□□□□□ -1.82
USE1YGL098W TBF1Q02457 562 aa3.66□□□□□ -1.82
USE1YGL098W STE20Q03497 939 aaKnown RBP3.66□□□□□ -1.82
USE1YGL098W GGA1Q06336 557 aa3.66□□□□□ -1.82
USE1YGL098W OMS1Q06668 471 aa3.66□□□□□ -1.82
USE1YGL098W TSR1Q07381 788 aaKnown RBP3.66□□□□□ -1.82
USE1YGL098W APC11Q12157 165 aa3.66□□□□□ -1.82
USE1YGL098W NFI1Q12216 726 aa3.66□□□□□ -1.82
USE1YGL098W CAT8P39113 1433 aa3.66□□□□□ -1.82
USE1YGL098W ARO1P08566 1588 aaKnown RBP3.66□□□□□ -1.82
USE1YGL098W AUS1Q08409 1394 aa3.65□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms