RNA–Protein interactions for RNA: YFL044C

OTU1, Transcript of Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p, yeastyeast

Gene OTU1, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
OTU1YFL044C RAD4P14736 754 aa5.12□□□□□ -1.59
OTU1YFL044C PHO87P25360 923 aa5.12□□□□□ -1.59
OTU1YFL044C CDC3P32457 520 aaKnown RBP5.12□□□□□ -1.59
OTU1YFL044C UTP22P53254 1237 aaPredicted RBP5.12□□□□□ -1.59
OTU1YFL044C HAP4P14064 554 aa5.11□□□□□ -1.59
OTU1YFL044C MAC1P35192 417 aa5.11□□□□□ -1.59
OTU1YFL044C TOS1P38288 455 aa5.11□□□□□ -1.59
OTU1YFL044C YFL034WP43564 1073 aa5.11□□□□□ -1.59
OTU1YFL044C ADE16P54113 591 aaKnown RBP5.11□□□□□ -1.59
OTU1YFL044C BUG1Q12191 341 aa5.11□□□□□ -1.59
OTU1YFL044C RPO41P13433 1351 aaKnown RBP5.11□□□□□ -1.59
OTU1YFL044C MIP1P15801 1254 aa5.1□□□□□ -1.59
OTU1YFL044C MRT4P33201 236 aaKnown RBP5.1□□□□□ -1.59
OTU1YFL044C MKS1P34072 584 aa5.1□□□□□ -1.59
OTU1YFL044C HAL5P38970 855 aaKnown RBP5.1□□□□□ -1.59
OTU1YFL044C SAP155P43612 1002 aa5.1□□□□□ -1.59
OTU1YFL044C KIN4Q01919 800 aa5.1□□□□□ -1.59
OTU1YFL044C CBC2Q08920 208 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
OTU1YFL044C TSC13Q99190 310 aa5.1□□□□□ -1.59
OTU1YFL044C MHP1P43638 1398 aa5.09□□□□□ -1.59
OTU1YFL044C CTT1P06115 562 aa5.09□□□□□ -1.59
OTU1YFL044C FBP26P32604 452 aa5.09□□□□□ -1.59
OTU1YFL044C ASH1P34233 588 aa5.09□□□□□ -1.59
OTU1YFL044C ETP1P38748 585 aaKnown RBP5.09□□□□□ -1.59
OTU1YFL044C ISU1Q03020 165 aa5.09□□□□□ -1.59
OTU1YFL044C HDA3Q06623 655 aa5.09□□□□□ -1.59
OTU1YFL044C RPP2BP02400 110 aaKnown RBP5.08□□□□□ -1.6
OTU1YFL044C CDC4P07834 779 aa5.08□□□□□ -1.6
OTU1YFL044C PDI1P17967 522 aaKnown RBP5.08□□□□□ -1.6
OTU1YFL044C GRX1P25373 110 aaKnown RBP5.08□□□□□ -1.6
OTU1YFL044C GAR1P28007 205 aaKnown RBP5.08□□□□□ -1.6
OTU1YFL044C AIM9P40053 627 aaKnown RBP5.08□□□□□ -1.6
OTU1YFL044C ACS2P52910 683 aaKnown RBP5.08□□□□□ -1.6
OTU1YFL044C ATG13Q06628 738 aa5.08□□□□□ -1.6
OTU1YFL044C GAS4Q08271 471 aa5.08□□□□□ -1.6
OTU1YFL044C MET32Q12041 191 aa5.08□□□□□ -1.6
OTU1YFL044C POM152P39685 1337 aa5.07□□□□□ -1.6
OTU1YFL044C YLR278CQ05854 1341 aa5.07□□□□□ -1.6
OTU1YFL044C UTR2P32623 467 aa5.07□□□□□ -1.6
OTU1YFL044C SLD2P34252 453 aa5.07□□□□□ -1.6
OTU1YFL044C YKL222CP35995 705 aa5.07□□□□□ -1.6
OTU1YFL044C ERT1P38140 529 aa5.07□□□□□ -1.6
OTU1YFL044C YER156CP40093 338 aaKnown RBP5.07□□□□□ -1.6
OTU1YFL044C MSN5P52918 1224 aa5.07□□□□□ -1.6
OTU1YFL044C TAP42Q04372 366 aa5.07□□□□□ -1.6
OTU1YFL044C SEC3P33332 1336 aaKnown RBP5.06□□□□□ -1.6
OTU1YFL044C SPT2P06843 333 aaPredicted RBP5.06□□□□□ -1.6
OTU1YFL044C DAT1P13483 248 aaKnown RBP5.06□□□□□ -1.6
OTU1YFL044C GRX4P32642 244 aa5.06□□□□□ -1.6
OTU1YFL044C TBS1P38114 1094 aa5.06□□□□□ -1.6
OTU1YFL044C BRE2P43132 505 aa5.06□□□□□ -1.6
OTU1YFL044C HST3P53687 447 aa5.06□□□□□ -1.6
OTU1YFL044C DFG5Q05031 458 aa5.06□□□□□ -1.6
OTU1YFL044C BDS1Q08347 646 aa5.06□□□□□ -1.6
OTU1YFL044C HAT1Q12341 374 aa5.06□□□□□ -1.6
OTU1YFL044C AUS1Q08409 1394 aa5.05□□□□□ -1.6
OTU1YFL044C STE6P12866 1290 aa5.05□□□□□ -1.6
OTU1YFL044C OSM1P21375 501 aaKnown RBP5.05□□□□□ -1.6
OTU1YFL044C NTH2P35172 780 aa5.05□□□□□ -1.6
OTU1YFL044C ROM1P53046 1155 aa5.05□□□□□ -1.6
OTU1YFL044C GCR2Q01722 534 aa5.05□□□□□ -1.6
OTU1YFL044C PUF6Q04373 656 aaKnown RBP5.05□□□□□ -1.6
OTU1YFL044C INP54Q08227 384 aaKnown RBP5.05□□□□□ -1.6
OTU1YFL044C UTP10P42945 1769 aaKnown RBP5.05□□□□□ -1.6
OTU1YFL044C TAO3P40468 2376 aa5.04□□□□□ -1.6
OTU1YFL044C VAN1P23642 535 aa5.04□□□□□ -1.6
OTU1YFL044C UGA3P26370 528 aa5.04□□□□□ -1.6
OTU1YFL044C SSF1P38789 453 aaPredicted RBP5.04□□□□□ -1.6
OTU1YFL044C RRT14P40470 206 aa5.04□□□□□ -1.6
OTU1YFL044C FAS2P19097 1887 aaKnown RBP5.04□□□□□ -1.6
OTU1YFL044C RPS9BP05755 195 aaKnown RBP5.03□□□□□ -1.6
OTU1YFL044C RPS6AP0CX37 236 aaKnown RBP5.03□□□□□ -1.6
OTU1YFL044C RPS6BP0CX38 236 aaPredicted RBP5.03□□□□□ -1.6
OTU1YFL044C AFT1P22149 690 aa5.03□□□□□ -1.6
OTU1YFL044C WTM2Q12206 467 aa5.03□□□□□ -1.6
OTU1YFL044C GBP2P25555 427 aaKnown RBP RIP-Chip data5.02□□□□□ -1.61not detected
OTU1YFL044C TPS3P38426 1054 aaKnown RBP5.02□□□□□ -1.61
OTU1YFL044C DLD3P39976 496 aaKnown RBP5.02□□□□□ -1.61
OTU1YFL044C CWH41P53008 833 aa5.02□□□□□ -1.61
OTU1YFL044C ORC1P54784 914 aaPredicted RBP5.02□□□□□ -1.61
OTU1YFL044C CTF4Q01454 927 aa5.02□□□□□ -1.61
OTU1YFL044C SEN54Q02825 467 aaPredicted RBP5.02□□□□□ -1.61
OTU1YFL044C KAR5Q04746 504 aa5.02□□□□□ -1.61
OTU1YFL044C PUN1Q06991 263 aa5.02□□□□□ -1.61
OTU1YFL044C TRS33Q99394 268 aa5.02□□□□□ -1.61
OTU1YFL044C CYT1P07143 309 aa5.01□□□□□ -1.61
OTU1YFL044C SWI5P08153 709 aa5.01□□□□□ -1.61
OTU1YFL044C YBP2P53169 641 aa5.01□□□□□ -1.61
OTU1YFL044C CWC15Q03772 175 aaKnown RBP5.01□□□□□ -1.61
OTU1YFL044C RIX7Q07844 837 aaKnown RBP5.01□□□□□ -1.61
OTU1YFL044C AIM44Q99299 758 aa5.01□□□□□ -1.61
OTU1YFL044C PFF1P38244 976 aa5□□□□□ -1.61
OTU1YFL044C PNP1Q05788 311 aa5□□□□□ -1.61
OTU1YFL044C NYV1Q12255 253 aa5□□□□□ -1.61
OTU1YFL044C YBL113CQ7M4S9 792 aa5□□□□□ -1.61
OTU1YFL044C NUP145P49687 1317 aa4.99□□□□□ -1.61
OTU1YFL044C ARG82P07250 355 aa4.99□□□□□ -1.61
OTU1YFL044C SRS2P12954 1174 aa4.99□□□□□ -1.61
OTU1YFL044C HEM3P28789 327 aa4.99□□□□□ -1.61
OTU1YFL044C YJR115WP47152 169 aa4.99□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms