RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeastyeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT1YFL038C TIM50Q02776 476 aa7.43□□□□□ -1.22
YPT1YFL038C EST2Q06163 884 aa7.43□□□□□ -1.22
YPT1YFL038C THI3Q07471 609 aa7.43□□□□□ -1.22
YPT1YFL038C RPL22AP05749 121 aaKnown RBP7.42□□□□□ -1.22
YPT1YFL038C MGM1P32266 881 aa7.42□□□□□ -1.22
YPT1YFL038C ICP55P40051 511 aa7.42□□□□□ -1.22
YPT1YFL038C UTP22P53254 1237 aaPredicted RBP7.42□□□□□ -1.22
YPT1YFL038C BUG1Q12191 341 aa7.42□□□□□ -1.22
YPT1YFL038C DPH6Q12429 685 aa7.42□□□□□ -1.22
YPT1YFL038C SES1P07284 462 aaKnown RBP7.41□□□□□ -1.22
YPT1YFL038C PFK2P16862 959 aaKnown RBP RIP-Chip data7.41□□□□□ -1.22not detected
YPT1YFL038C COQ1P18900 473 aa7.41□□□□□ -1.22
YPT1YFL038C DIT2P21595 489 aa7.41□□□□□ -1.22
YPT1YFL038C GSY2P27472 705 aa7.41□□□□□ -1.22
YPT1YFL038C GRX7P38068 203 aa7.41□□□□□ -1.22
YPT1YFL038C TPM2P40414 161 aa7.41□□□□□ -1.22
YPT1YFL038C EPL1P43572 832 aa7.41□□□□□ -1.22
YPT1YFL038C SYF1Q04048 859 aaPredicted RBP7.41□□□□□ -1.22
YPT1YFL038C HSP82P02829 709 aaKnown RBP7.4□□□□□ -1.22
YPT1YFL038C BMH2P34730 273 aaKnown RBP7.4□□□□□ -1.22
YPT1YFL038C SWI4P25302 1093 aaKnown RBP7.39□□□□□ -1.23
YPT1YFL038C SRP40P32583 406 aaPredicted RBP7.39□□□□□ -1.23
YPT1YFL038C RPN10P38886 268 aaKnown RBP7.39□□□□□ -1.23
YPT1YFL038C RRP8P38961 392 aaKnown RBP7.39□□□□□ -1.23
YPT1YFL038C AKR1P39010 764 aa7.39□□□□□ -1.23
YPT1YFL038C RPS15Q01855 142 aaKnown RBP7.39□□□□□ -1.23
YPT1YFL038C HOS3Q02959 697 aaKnown RBP7.39□□□□□ -1.23
YPT1YFL038C INM2Q05533 292 aa7.39□□□□□ -1.23
YPT1YFL038C DCS2Q12123 353 aa7.39□□□□□ -1.23
YPT1YFL038C HXK1P04806 485 aaKnown RBP7.38□□□□□ -1.23
YPT1YFL038C MCM4P30665 933 aaKnown RBP7.38□□□□□ -1.23
YPT1YFL038C ASF1P32447 279 aa7.38□□□□□ -1.23
YPT1YFL038C BDF1P35817 686 aa7.38□□□□□ -1.23
YPT1YFL038C RPN1P38764 993 aaKnown RBP7.38□□□□□ -1.23
YPT1YFL038C FYV10P40492 516 aa7.38□□□□□ -1.23
YPT1YFL038C WAR1Q03631 944 aa7.38□□□□□ -1.23
YPT1YFL038C VMS1Q04311 632 aaKnown RBP7.38□□□□□ -1.23
YPT1YFL038C CTI6Q08923 506 aa7.38□□□□□ -1.23
YPT1YFL038C CHO2P05374 869 aaKnown RBP7.37□□□□□ -1.23
YPT1YFL038C HCA4P20448 770 aaKnown RBP7.37□□□□□ -1.23
YPT1YFL038C SPC110P32380 944 aa7.37□□□□□ -1.23
YPT1YFL038C SPL2P38839 148 aa7.37□□□□□ -1.23
YPT1YFL038C YIR042CP40586 236 aa7.37□□□□□ -1.23
YPT1YFL038C CEP3P40969 608 aa7.37□□□□□ -1.23
YPT1YFL038C CUE3P53137 624 aaKnown RBP7.37□□□□□ -1.23
YPT1YFL038C UFD2P54860 961 aa7.37□□□□□ -1.23
YPT1YFL038C TFC6Q06339 672 aa7.37□□□□□ -1.23
YPT1YFL038C BDF2Q07442 638 aa7.37□□□□□ -1.23
YPT1YFL038C CDC6P09119 513 aa7.36□□□□□ -1.23
YPT1YFL038C SSA2P10592 639 aaKnown RBP7.36□□□□□ -1.23
YPT1YFL038C RGP1P16664 663 aa7.36□□□□□ -1.23
YPT1YFL038C MCM3P24279 971 aaKnown RBP7.36□□□□□ -1.23
YPT1YFL038C KRE2P27809 442 aa7.36□□□□□ -1.23
YPT1YFL038C MYO3P36006 1272 aa7.36□□□□□ -1.23
YPT1YFL038C BOI1P38041 980 aaKnown RBP7.36□□□□□ -1.23
YPT1YFL038C MAL31P38156 614 aa7.36□□□□□ -1.23
YPT1YFL038C RTS1P38903 757 aa7.36□□□□□ -1.23
YPT1YFL038C NOC2P39744 710 aaKnown RBP7.36□□□□□ -1.23
YPT1YFL038C YMR074CQ04773 145 aa7.36□□□□□ -1.23
YPT1YFL038C GET3Q12154 354 aaKnown RBP7.36□□□□□ -1.23
YPT1YFL038C LCB1P25045 558 aaKnown RBP7.35□□□□□ -1.23
YPT1YFL038C URA1P28272 314 aaPredicted RBP7.35□□□□□ -1.23
YPT1YFL038C ANP1P32629 500 aa7.35□□□□□ -1.23
YPT1YFL038C MFT1P33441 392 aaKnown RBP7.35□□□□□ -1.23
YPT1YFL038C MNR2P35724 969 aa7.35□□□□□ -1.23
YPT1YFL038C TCD1P38756 429 aa7.35□□□□□ -1.23
YPT1YFL038C PTK2P47116 818 aaKnown RBP7.35□□□□□ -1.23
YPT1YFL038C HDA1P53973 706 aa7.35□□□□□ -1.23
YPT1YFL038C PSF3Q12146 194 aa7.35□□□□□ -1.23
YPT1YFL038C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.35□□□□□ -1.23not detected
YPT1YFL038C FAS2P19097 1887 aaKnown RBP7.34□□□□□ -1.23
YPT1YFL038C FIG2P25653 1609 aa7.34□□□□□ -1.23
YPT1YFL038C SIT4P20604 311 aa7.34□□□□□ -1.23
YPT1YFL038C UBP1P25037 809 aa7.34□□□□□ -1.23
YPT1YFL038C BMH1P29311 267 aaKnown RBP7.34□□□□□ -1.23
YPT1YFL038C FRD1P32614 470 aaKnown RBP7.34□□□□□ -1.23
YPT1YFL038C PTK1P36002 662 aaPredicted RBP7.34□□□□□ -1.23
YPT1YFL038C PSY4P38193 441 aa7.34□□□□□ -1.23
YPT1YFL038C TOS1P38288 455 aa7.34□□□□□ -1.23
YPT1YFL038C YFH7P43591 353 aa7.34□□□□□ -1.23
YPT1YFL038C ALG2P43636 503 aa7.34□□□□□ -1.23
YPT1YFL038C RPT4P53549 437 aaKnown RBP7.34□□□□□ -1.23
YPT1YFL038C GDE1Q02979 1223 aa7.34□□□□□ -1.23
YPT1YFL038C IRC4Q03036 179 aa7.34□□□□□ -1.23
YPT1YFL038C CEX1Q12453 761 aa7.34□□□□□ -1.23
YPT1YFL038C VPS1P21576 704 aaKnown RBP7.33□□□□□ -1.24
YPT1YFL038C MAK31P23059 88 aa7.33□□□□□ -1.24
YPT1YFL038C RXT2P38255 430 aa7.33□□□□□ -1.24
YPT1YFL038C LEO1P38439 464 aa7.33□□□□□ -1.24
YPT1YFL038C JSN1P47135 1091 aaKnown RBP RIP-Chip data7.33□□□□□ -1.24not detected
YPT1YFL038C CTH1P47976 325 aa7.33□□□□□ -1.24
YPT1YFL038C LYS4P49367 693 aaPredicted RBP7.33□□□□□ -1.24
YPT1YFL038C VPS75P53853 264 aa7.33□□□□□ -1.24
YPT1YFL038C UBX2Q04228 584 aa7.33□□□□□ -1.24
YPT1YFL038C TFC8Q12308 588 aa7.33□□□□□ -1.24
YPT1YFL038C PET111P08468 800 aa7.32□□□□□ -1.24
YPT1YFL038C RNR3P21672 869 aaKnown RBP7.32□□□□□ -1.24
YPT1YFL038C PXL1P36166 706 aa7.32□□□□□ -1.24
YPT1YFL038C ADE17P38009 592 aaKnown RBP7.32□□□□□ -1.24
YPT1YFL038C PCI8P40512 444 aa7.32□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 53.2 ms