RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeastyeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB4YFL002C MSN1P22148 382 aa5.32□□□□□ -1.56
SPB4YFL002C MRT4P33201 236 aaKnown RBP5.32□□□□□ -1.56
SPB4YFL002C DUT1P33317 147 aa5.32□□□□□ -1.56
SPB4YFL002C YBL086CP38177 466 aa5.32□□□□□ -1.56
SPB4YFL002C SPF1P39986 1215 aaKnown RBP5.32□□□□□ -1.56
SPB4YFL002C PSY2P40164 858 aa5.32□□□□□ -1.56
SPB4YFL002C YPL109CQ02981 657 aa5.32□□□□□ -1.56
SPB4YFL002C DFG5Q05031 458 aa5.32□□□□□ -1.56
SPB4YFL002C TIF6Q12522 245 aaKnown RBP5.32□□□□□ -1.56
SPB4YFL002C Q0182Q9ZZW1 134 aa5.32□□□□□ -1.56
SPB4YFL002C FLP1P03870 423 aa5.31□□□□□ -1.56
SPB4YFL002C PRI2P20457 528 aa5.31□□□□□ -1.56
SPB4YFL002C CHZ1P40019 153 aaPredicted RBP5.31□□□□□ -1.56
SPB4YFL002C BDP1P46678 594 aa5.3□□□□□ -1.56
SPB4YFL002C TIM54P47045 478 aa5.3□□□□□ -1.56
SPB4YFL002C YJR142WP47173 342 aa5.3□□□□□ -1.56
SPB4YFL002C PHO8P11491 566 aa5.3□□□□□ -1.56
SPB4YFL002C DLD3P39976 496 aaKnown RBP5.3□□□□□ -1.56
SPB4YFL002C QDR2P40474 542 aa5.3□□□□□ -1.56
SPB4YFL002C ADI1Q03677 179 aa5.3□□□□□ -1.56
SPB4YFL002C CDC4P07834 779 aa5.29□□□□□ -1.56
SPB4YFL002C MCM5P29496 775 aaKnown RBP5.29□□□□□ -1.56
SPB4YFL002C TIM23P32897 222 aa5.29□□□□□ -1.56
SPB4YFL002C YBR287WP38355 427 aa5.29□□□□□ -1.56
SPB4YFL002C YHR020WP38708 688 aaKnown RBP5.29□□□□□ -1.56
SPB4YFL002C MSH4P40965 878 aaPredicted RBP5.29□□□□□ -1.56
SPB4YFL002C YJR115WP47152 169 aa5.29□□□□□ -1.56
SPB4YFL002C TYW3P53177 273 aa5.29□□□□□ -1.56
SPB4YFL002C YNL165WP53891 406 aa5.29□□□□□ -1.56
SPB4YFL002C RTT10Q08924 1013 aa5.29□□□□□ -1.56
SPB4YFL002C YLR125WQ12138 136 aa5.29□□□□□ -1.56
SPB4YFL002C ULP1Q02724 621 aa5.28□□□□□ -1.56
SPB4YFL002C GCR1P07261 785 aa5.27□□□□□ -1.57
SPB4YFL002C UGA4P32837 571 aa5.27□□□□□ -1.57
SPB4YFL002C YKL069WP36088 180 aa5.27□□□□□ -1.57
SPB4YFL002C ISW1P38144 1129 aa5.27□□□□□ -1.57
SPB4YFL002C UBP12P39538 1254 aa5.27□□□□□ -1.57
SPB4YFL002C PIC2P40035 300 aa5.27□□□□□ -1.57
SPB4YFL002C SUB1P54000 292 aaKnown RBP5.27□□□□□ -1.57
SPB4YFL002C FLC1Q08967 793 aa5.27□□□□□ -1.57
SPB4YFL002C FAL1Q12099 399 aaKnown RBP5.27□□□□□ -1.57
SPB4YFL002C CCP1P00431 361 aa5.27□□□□□ -1.57
SPB4YFL002C MLF3P32047 452 aa5.27□□□□□ -1.57
SPB4YFL002C TMA46Q12000 345 aaKnown RBP5.27□□□□□ -1.57
SPB4YFL002C MET22P32179 357 aa5.26□□□□□ -1.57
SPB4YFL002C KAP122P32767 1081 aa5.26□□□□□ -1.57
SPB4YFL002C SWE1P32944 819 aa5.26□□□□□ -1.57
SPB4YFL002C RSP5P39940 809 aaKnown RBP5.26□□□□□ -1.57
SPB4YFL002C ALA1P40825 983 aaKnown RBP5.26□□□□□ -1.57
SPB4YFL002C CTR9P89105 1077 aa5.26□□□□□ -1.57
SPB4YFL002C GIP1P38229 639 aa5.25□□□□□ -1.57
SPB4YFL002C NOP2P40991 618 aaKnown RBP5.25□□□□□ -1.57
SPB4YFL002C NUT1P53114 1132 aa5.25□□□□□ -1.57
SPB4YFL002C THI4P32318 326 aa5.25□□□□□ -1.57
SPB4YFL002C RVS167P39743 482 aaKnown RBP5.25□□□□□ -1.57
SPB4YFL002C MON1P53129 644 aa5.25□□□□□ -1.57
SPB4YFL002C EEB1Q02891 456 aa5.25□□□□□ -1.57
SPB4YFL002C SPO75Q07798 868 aa5.25□□□□□ -1.57
SPB4YFL002C BAS1P22035 811 aa5.24□□□□□ -1.57
SPB4YFL002C ECM2P38241 364 aaKnown RBP5.24□□□□□ -1.57
SPB4YFL002C MSH6Q03834 1242 aa5.24□□□□□ -1.57
SPB4YFL002C YOR296WQ08748 1289 aa5.24□□□□□ -1.57
SPB4YFL002C COBP00163 385 aa5.23□□□□□ -1.57
SPB4YFL002C RPS31P05759 152 aaKnown RBP5.23□□□□□ -1.57
SPB4YFL002C RPC31P17890 251 aa5.23□□□□□ -1.57
SPB4YFL002C YBR184WP38299 523 aa5.23□□□□□ -1.57
SPB4YFL002C BSD2P38356 321 aa5.23□□□□□ -1.57
SPB4YFL002C GGA2P38817 585 aaKnown RBP5.23□□□□□ -1.57
SPB4YFL002C AIM46P38885 310 aa5.23□□□□□ -1.57
SPB4YFL002C SSN3P39073 555 aa5.23□□□□□ -1.57
SPB4YFL002C YGR125WP53273 1036 aa5.23□□□□□ -1.57
SPB4YFL002C HED1Q03937 162 aa5.23□□□□□ -1.57
SPB4YFL002C GAL11P19659 1081 aa5.23□□□□□ -1.57
SPB4YFL002C SRM1P21827 482 aa5.23□□□□□ -1.57
SPB4YFL002C STE5P32917 917 aa5.23□□□□□ -1.57
SPB4YFL002C CRP1P38845 465 aaKnown RBP5.23□□□□□ -1.57
SPB4YFL002C YEN1P40028 759 aa5.23□□□□□ -1.57
SPB4YFL002C YTA6P40328 754 aa5.23□□□□□ -1.57
SPB4YFL002C TPM2P40414 161 aa5.23□□□□□ -1.57
SPB4YFL002C KRE33P53914 1056 aaKnown RBP5.23□□□□□ -1.57
SPB4YFL002C DNM1P54861 757 aa5.23□□□□□ -1.57
SPB4YFL002C OSH2Q12451 1283 aa5.23□□□□□ -1.57
SPB4YFL002C NOP14Q99207 810 aaKnown RBP5.23□□□□□ -1.57
SPB4YFL002C ERR1P0CX10 437 aa5.22□□□□□ -1.57
SPB4YFL002C ERR2P0CX11 437 aa5.22□□□□□ -1.57
SPB4YFL002C AGP1P25376 633 aa5.22□□□□□ -1.57
SPB4YFL002C RAD27P26793 382 aa5.22□□□□□ -1.57
SPB4YFL002C RPL8BP29453 256 aaKnown RBP5.22□□□□□ -1.57
SPB4YFL002C NAB2P32505 525 aaKnown RBP RIP-Chip data5.22□□□□□ -1.57 RIP-Chip
SPB4YFL002C DUR3P33413 735 aa5.22□□□□□ -1.57
SPB4YFL002C KRI1P42846 591 aaKnown RBP5.22□□□□□ -1.57
SPB4YFL002C JJJ2P46997 583 aa5.22□□□□□ -1.57
SPB4YFL002C GNP1P48813 663 aa5.22□□□□□ -1.57
SPB4YFL002C SHE9Q04172 456 aa5.22□□□□□ -1.57
SPB4YFL002C EMG1Q06287 252 aaKnown RBP5.22□□□□□ -1.57
SPB4YFL002C MRL1Q06815 381 aa5.22□□□□□ -1.57
SPB4YFL002C YOL057WQ08225 711 aa5.22□□□□□ -1.57
SPB4YFL002C SHM1P37292 490 aaPredicted RBP5.21□□□□□ -1.58
SPB4YFL002C XKS1P42826 600 aa5.21□□□□□ -1.58
SPB4YFL002C SAP155P43612 1002 aa5.21□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms