RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C STV1P37296 890 aa9.08□□□□□ -0.96
PUP3YER094C RTS1P38903 757 aa9.08□□□□□ -0.96
PUP3YER094C VID28P40547 921 aa9.08□□□□□ -0.96
PUP3YER094C VPS4P52917 437 aa9.08□□□□□ -0.96
PUP3YER094C NSG2P53898 299 aa9.08□□□□□ -0.96
PUP3YER094C EAF7P53911 425 aaKnown RBP9.08□□□□□ -0.96
PUP3YER094C YPL260WQ08977 551 aa9.08□□□□□ -0.96
PUP3YER094C CHO2P05374 869 aaKnown RBP9.07□□□□□ -0.96
PUP3YER094C RER2P35196 286 aa9.07□□□□□ -0.96
PUP3YER094C VPS24P36095 224 aaKnown RBP9.07□□□□□ -0.96
PUP3YER094C NPA3P47122 385 aa9.07□□□□□ -0.96
PUP3YER094C YKE2P52553 114 aa9.07□□□□□ -0.96
PUP3YER094C RPS15Q01855 142 aaKnown RBP9.07□□□□□ -0.96
PUP3YER094C TIM50Q02776 476 aa9.07□□□□□ -0.96
PUP3YER094C RPL19AP0CX82 189 aaKnown RBP9.06□□□□□ -0.96
PUP3YER094C RPL19BP0CX83 189 aaPredicted RBP9.06□□□□□ -0.96
PUP3YER094C GAP1P19145 602 aaPredicted RBP9.06□□□□□ -0.96
PUP3YER094C YHL050CP38721 697 aa9.06□□□□□ -0.96
PUP3YER094C EST2Q06163 884 aa9.06□□□□□ -0.96
PUP3YER094C KEL3Q08979 651 aaPredicted RBP9.06□□□□□ -0.96
PUP3YER094C LSP1Q12230 341 aaKnown RBP9.06□□□□□ -0.96
PUP3YER094C FBP26P32604 452 aa9.05□□□□□ -0.96
PUP3YER094C VID27P40157 782 aa9.05□□□□□ -0.96
PUP3YER094C FET4P40988 552 aa9.05□□□□□ -0.96
PUP3YER094C YGL081WP53156 320 aa9.05□□□□□ -0.96
PUP3YER094C AIM7Q12156 149 aa9.05□□□□□ -0.96
PUP3YER094C THS1P04801 734 aaKnown RBP9.04□□□□□ -0.96
PUP3YER094C GLC3P32775 704 aa9.04□□□□□ -0.96
PUP3YER094C DJP1P40564 432 aa9.04□□□□□ -0.96
PUP3YER094C ENT3P47160 408 aa9.04□□□□□ -0.96
PUP3YER094C CTF18P49956 741 aa9.04□□□□□ -0.96
PUP3YER094C RAD61Q99359 647 aa9.04□□□□□ -0.96
PUP3YER094C MATALPHA2P0CY08 210 aa9.03□□□□□ -0.96
PUP3YER094C HMLALPHA2P0CY09 210 aa9.03□□□□□ -0.96
PUP3YER094C BIK1P11709 440 aa9.03□□□□□ -0.96
PUP3YER094C HPR1P17629 752 aaKnown RBP9.03□□□□□ -0.96
PUP3YER094C RIT1P23796 513 aa9.03□□□□□ -0.96
PUP3YER094C ANP1P32629 500 aa9.03□□□□□ -0.96
PUP3YER094C TTI1P36097 1038 aa9.03□□□□□ -0.96
PUP3YER094C MSH4P40965 878 aaPredicted RBP9.03□□□□□ -0.96
PUP3YER094C RTG2P32608 588 aaKnown RBP9.02□□□□□ -0.97
PUP3YER094C MYO3P36006 1272 aa9.02□□□□□ -0.97
PUP3YER094C YHL017WP38745 532 aa9.02□□□□□ -0.97
PUP3YER094C BUD6P41697 788 aa9.02□□□□□ -0.97
PUP3YER094C MTC3P53077 123 aa9.02□□□□□ -0.97
PUP3YER094C HDA1P53973 706 aa9.02□□□□□ -0.97
PUP3YER094C AAD16Q02895 342 aa9.02□□□□□ -0.97
PUP3YER094C TFC6Q06339 672 aa9.02□□□□□ -0.97
PUP3YER094C PSK2Q08217 1101 aa9.02□□□□□ -0.97
PUP3YER094C PFK2P16862 959 aaKnown RBP RIP-Chip data9.01□□□□□ -0.97not detected
PUP3YER094C VPS8P39702 1274 aa9.01□□□□□ -0.97
PUP3YER094C UTP7P40055 554 aaKnown RBP9.01□□□□□ -0.97
PUP3YER094C EPL1P43572 832 aa9.01□□□□□ -0.97
PUP3YER094C YJL171CP46992 396 aa9.01□□□□□ -0.97
PUP3YER094C PEX14P53112 341 aa9.01□□□□□ -0.97
PUP3YER094C YGR117CP53270 476 aa9.01□□□□□ -0.97
PUP3YER094C UBP10P53874 792 aaPredicted RBP9.01□□□□□ -0.97
PUP3YER094C ECM23Q02710 187 aa9.01□□□□□ -0.97
PUP3YER094C PCL8Q08966 492 aa9.01□□□□□ -0.97
PUP3YER094C YLR278CQ05854 1341 aa9.01□□□□□ -0.97
PUP3YER094C CBP1P07252 654 aa9□□□□□ -0.97
PUP3YER094C MPH3P0CE00 602 aa9□□□□□ -0.97
PUP3YER094C ADP1P25371 1049 aa9□□□□□ -0.97
PUP3YER094C PRO3P32263 286 aaKnown RBP9□□□□□ -0.97
PUP3YER094C ALG2P43636 503 aa9□□□□□ -0.97
PUP3YER094C PTK2P47116 818 aaKnown RBP9□□□□□ -0.97
PUP3YER094C CPA2P03965 1118 aaKnown RBP8.99□□□□□ -0.97
PUP3YER094C PMA1P05030 918 aaKnown RBP8.99□□□□□ -0.97
PUP3YER094C MAK31P23059 88 aa8.99□□□□□ -0.97
PUP3YER094C PRX1P34227 261 aaKnown RBP8.99□□□□□ -0.97
PUP3YER094C AKR1P39010 764 aa8.99□□□□□ -0.97
PUP3YER094C EMP47P43555 445 aa8.99□□□□□ -0.97
PUP3YER094C YDL124WQ07551 312 aaKnown RBP8.99□□□□□ -0.97
PUP3YER094C ELG1Q12050 791 aa8.99□□□□□ -0.97
PUP3YER094C HCA4P20448 770 aaKnown RBP8.98□□□□□ -0.97
PUP3YER094C SRM1P21827 482 aa8.98□□□□□ -0.97
PUP3YER094C PRE8P23639 250 aa8.98□□□□□ -0.97
PUP3YER094C YBL028CP38202 106 aa8.98□□□□□ -0.97
PUP3YER094C CSM2P40465 213 aa8.98□□□□□ -0.97
PUP3YER094C SNU71P53207 620 aaKnown RBP8.98□□□□□ -0.97
PUP3YER094C HST1P53685 503 aa8.98□□□□□ -0.97
PUP3YER094C HRQ1Q05549 1077 aa8.98□□□□□ -0.97
PUP3YER094C DIT2P21595 489 aa8.97□□□□□ -0.97
PUP3YER094C MSP1P28737 362 aa8.97□□□□□ -0.97
PUP3YER094C CST26P38226 397 aa8.97□□□□□ -0.97
PUP3YER094C BDH2P39713 417 aa8.97□□□□□ -0.97
PUP3YER094C RPT6Q01939 405 aaKnown RBP8.97□□□□□ -0.97
PUP3YER094C COG8Q04632 607 aa8.97□□□□□ -0.97
PUP3YER094C YLR407WQ06070 228 aa8.97□□□□□ -0.97
PUP3YER094C ISW2Q08773 1120 aa8.97□□□□□ -0.97
PUP3YER094C YOR111WQ99210 232 aa8.97□□□□□ -0.97
PUP3YER094C RAD53P22216 821 aa8.96□□□□□ -0.98
PUP3YER094C RPL8BP29453 256 aaKnown RBP8.96□□□□□ -0.98
PUP3YER094C MAL31P38156 614 aa8.96□□□□□ -0.98
PUP3YER094C NIT1P40447 199 aa8.96□□□□□ -0.98
PUP3YER094C MYO5Q04439 1219 aaKnown RBP8.96□□□□□ -0.98
PUP3YER094C KIN1P13185 1064 aa8.95□□□□□ -0.98
PUP3YER094C ACE2P21192 770 aa8.95□□□□□ -0.98
PUP3YER094C RNR3P21672 869 aaKnown RBP8.95□□□□□ -0.98
PUP3YER094C CHS3P29465 1165 aa8.95□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms