RNA–Protein interactions for RNA: YER028C

MIG3, Transcript of Transcriptional regulator, yeast

Gene MIG3, Length 1,185 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MIG3	YER028C	CTR9	P89105	1077 aa		5.46	□□□□□ -1.54
MIG3	YER028C	TY1A-NL1	Q12391	440 aa	Known RBP	5.46	□□□□□ -1.54
MIG3	YER028C	COB	P00163	385 aa		5.45	□□□□□ -1.54
MIG3	YER028C	FUR4	P05316	633 aa	Known RBP	5.45	□□□□□ -1.54
MIG3	YER028C	FUS1	P11710	512 aa		5.44	□□□□□ -1.54
MIG3	YER028C	SAC7	P17121	654 aa		5.44	□□□□□ -1.54
MIG3	YER028C	PYC2	P32327	1180 aa	Known RBP	5.44	□□□□□ -1.54
MIG3	YER028C	IRS4	P36115	615 aa	Known RBP	5.44	□□□□□ -1.54
MIG3	YER028C	ARI1	P53111	347 aa	Known RBP	5.44	□□□□□ -1.54
MIG3	YER028C	TRL1	P09880	827 aa	Known RBP	5.43	□□□□□ -1.54
MIG3	YER028C	SMC1	P32908	1225 aa		5.43	□□□□□ -1.54
MIG3	YER028C	PAN5	P38787	379 aa		5.43	□□□□□ -1.54
MIG3	YER028C	FIR1	P40020	876 aa		5.43	□□□□□ -1.54
MIG3	YER028C	MNL2	Q12205	849 aa		5.43	□□□□□ -1.54
MIG3	YER028C	GLO4	Q12320	285 aa		5.43	□□□□□ -1.54
MIG3	YER028C	DUR3	P33413	735 aa		5.42	□□□□□ -1.54
MIG3	YER028C	QDR1	P40475	563 aa		5.42	□□□□□ -1.54
MIG3	YER028C	ATG1	P53104	897 aa		5.42	□□□□□ -1.54
MIG3	YER028C	KAR5	Q04746	504 aa		5.42	□□□□□ -1.54
MIG3	YER028C	SPA2	P23201	1466 aa	Known RBP	5.41	□□□□□ -1.54
MIG3	YER028C	SSA1	P10591	642 aa	Known RBP	5.41	□□□□□ -1.54
MIG3	YER028C	GLO3	P38682	493 aa	Known RBP	5.41	□□□□□ -1.54
MIG3	YER028C	POL5	P39985	1022 aa	Known RBP	5.41	□□□□□ -1.54
MIG3	YER028C	GUP1	P53154	560 aa		5.41	□□□□□ -1.54
MIG3	YER028C	YNR065C	P53751	1116 aa		5.41	□□□□□ -1.54
MIG3	YER028C	SPT6	P23615	1451 aa	Known RBP	5.4	□□□□□ -1.54
MIG3	YER028C	YJR124C	P47159	448 aa		5.4	□□□□□ -1.54
MIG3	YER028C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	5.4	□□□□□ -1.54	RIP-Chip
MIG3	YER028C	RSC4	Q02206	625 aa		5.4	□□□□□ -1.54
MIG3	YER028C	KOG1	P38873	1557 aa		5.4	□□□□□ -1.55
MIG3	YER028C	HAS1	Q03532	505 aa	Known RBP	5.39	□□□□□ -1.55
MIG3	YER028C	REC8	Q12188	680 aa		5.39	□□□□□ -1.55
MIG3	YER028C	SBP1	P10080	294 aa	Known RBP	5.38	□□□□□ -1.55
MIG3	YER028C	MDJ2	P42834	146 aa		5.38	□□□□□ -1.55
MIG3	YER028C	YLR122C	Q12312	125 aa		5.38	□□□□□ -1.55
MIG3	YER028C	HSL1	P34244	1518 aa		5.38	□□□□□ -1.55
MIG3	YER028C	ERS1	P17261	260 aa		5.37	□□□□□ -1.55
MIG3	YER028C	YBR287W	P38355	427 aa		5.37	□□□□□ -1.55
MIG3	YER028C	RIM11	P38615	370 aa		5.37	□□□□□ -1.55
MIG3	YER028C	ACF4	P47129	309 aa		5.37	□□□□□ -1.55
MIG3	YER028C	INP52	P50942	1183 aa		5.37	□□□□□ -1.55
MIG3	YER028C	RPL34A	P87262	121 aa	Predicted RBP	5.37	□□□□□ -1.55
MIG3	YER028C	YKR073C	P36153	106 aa		5.36	□□□□□ -1.55
MIG3	YER028C	ERP5	P38819	212 aa		5.36	□□□□□ -1.55
MIG3	YER028C	LEM3	P42838	414 aa		5.36	□□□□□ -1.55
MIG3	YER028C	NCE103	P53615	221 aa		5.36	□□□□□ -1.55
MIG3	YER028C	DSE4	P53753	1117 aa		5.36	□□□□□ -1.55
MIG3	YER028C	ALO1	P54783	526 aa	Known RBP	5.36	□□□□□ -1.55
MIG3	YER028C	UFD2	P54860	961 aa		5.36	□□□□□ -1.55
MIG3	YER028C	TRS120	Q04183	1289 aa		5.36	□□□□□ -1.55
MIG3	YER028C	GPI13	Q07830	1017 aa		5.36	□□□□□ -1.55
MIG3	YER028C	FRT1	Q99332	602 aa		5.36	□□□□□ -1.55
MIG3	YER028C	TRP3	P00937	484 aa		5.35	□□□□□ -1.55
MIG3	YER028C	RSC6	P25632	483 aa		5.35	□□□□□ -1.55
MIG3	YER028C	NAM7	P30771	971 aa	Known RBP	5.35	□□□□□ -1.55
MIG3	YER028C	CDC3	P32457	520 aa	Known RBP	5.35	□□□□□ -1.55
MIG3	YER028C	GEF1	P37020	779 aa		5.35	□□□□□ -1.55
MIG3	YER028C	ELG1	Q12050	791 aa		5.35	□□□□□ -1.55
MIG3	YER028C	CMR1	Q12510	522 aa	Known RBP	5.35	□□□□□ -1.55
MIG3	YER028C	MSH6	Q03834	1242 aa		5.34	□□□□□ -1.55
MIG3	YER028C	SPO71	Q03868	1245 aa		5.34	□□□□□ -1.55
MIG3	YER028C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	5.34	□□□□□ -1.55	not detected
MIG3	YER028C	PRP5	P21372	849 aa	Predicted RBP	5.33	□□□□□ -1.56
MIG3	YER028C	SAF1	P38352	637 aa		5.33	□□□□□ -1.56
MIG3	YER028C	NEO1	P40527	1151 aa		5.33	□□□□□ -1.56
MIG3	YER028C	YBL113C	Q7M4S9	792 aa		5.33	□□□□□ -1.56
MIG3	YER028C	GRS1	P38088	690 aa	Known RBP	5.32	□□□□□ -1.56
MIG3	YER028C	AKR1	P39010	764 aa		5.32	□□□□□ -1.56
MIG3	YER028C	FET4	P40988	552 aa		5.32	□□□□□ -1.56
MIG3	YER028C	NUT2	Q06213	157 aa		5.32	□□□□□ -1.56
MIG3	YER028C	FLP1	P03870	423 aa		5.31	□□□□□ -1.56
MIG3	YER028C	COQ2	P32378	372 aa		5.31	□□□□□ -1.56
MIG3	YER028C	MAE1	P36013	669 aa	Known RBP	5.31	□□□□□ -1.56
MIG3	YER028C	SAP155	P43612	1002 aa		5.31	□□□□□ -1.56
MIG3	YER028C	CTH1	P47976	325 aa		5.31	□□□□□ -1.56
MIG3	YER028C	CDC55	Q00362	526 aa		5.31	□□□□□ -1.56
MIG3	YER028C	NPR1	P22211	790 aa		5.3	□□□□□ -1.56
MIG3	YER028C	KIP3	P53086	805 aa	Known RBP	5.3	□□□□□ -1.56
MIG3	YER028C	YNL011C	P53980	444 aa		5.3	□□□□□ -1.56
MIG3	YER028C	SSN2	P38931	1420 aa		5.3	□□□□□ -1.56
MIG3	YER028C	KAE1	P36132	386 aa		5.29	□□□□□ -1.56
MIG3	YER028C	SEA4	P38164	1038 aa		5.29	□□□□□ -1.56
MIG3	YER028C	HAT1	Q12341	374 aa		5.29	□□□□□ -1.56
MIG3	YER028C	HIR3	P47171	1648 aa		5.28	□□□□□ -1.56
MIG3	YER028C	OMA1	P36163	345 aa		5.28	□□□□□ -1.56
MIG3	YER028C	BSC2	Q05611	235 aa		5.28	□□□□□ -1.56
MIG3	YER028C	YIG1	Q08956	461 aa		5.28	□□□□□ -1.56
MIG3	YER028C	HTS1	P07263	546 aa	Known RBP	5.27	□□□□□ -1.57
MIG3	YER028C	YGR130C	P53278	816 aa		5.27	□□□□□ -1.57
MIG3	YER028C	MED7	Q08278	222 aa		5.27	□□□□□ -1.57
MIG3	YER028C	MAC1	P35192	417 aa		5.26	□□□□□ -1.57
MIG3	YER028C	NUT1	P53114	1132 aa		5.26	□□□□□ -1.57
MIG3	YER028C	ECM5	Q03214	1411 aa		5.25	□□□□□ -1.57
MIG3	YER028C	XRN1	P22147	1528 aa	Known RBP	5.25	□□□□□ -1.57
MIG3	YER028C	TY1A-LR4	P0C2I8	440 aa	Known RBP	5.25	□□□□□ -1.57
MIG3	YER028C	TY1A-DR6	P0CX70	440 aa		5.25	□□□□□ -1.57
MIG3	YER028C	TY1A-ER1	P0CX71	440 aa		5.25	□□□□□ -1.57
MIG3	YER028C	TY1A-LR2	P0CX72	440 aa		5.25	□□□□□ -1.57
MIG3	YER028C	TY1A-PL	P0CX73	440 aa		5.25	□□□□□ -1.57
MIG3	YER028C	TY1A-JR1	P0CX74	440 aa		5.25	□□□□□ -1.57

Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms