RNA–Protein interactions for RNA: YDR545W

YRF1-1, Transcript of Helicase encoded by the Y' element of subtelomeric regions, yeastyeast

Gene YRF1-1, Length 5,391 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YRF1-1YDR545W YMR1P47147 688 aaKnown RBP RIP-Chip data8.51□□□□□ -1.05not detected
YRF1-1YDR545W ATG9Q12142 997 aa8.51□□□□□ -1.05
YRF1-1YDR545W UGA3P26370 528 aa8.51□□□□□ -1.05
YRF1-1YDR545W PUP2P32379 260 aa8.51□□□□□ -1.05
YRF1-1YDR545W MAL33P38157 468 aa8.51□□□□□ -1.05
YRF1-1YDR545W AIM9P40053 627 aaKnown RBP8.51□□□□□ -1.05
YRF1-1YDR545W AUS1Q08409 1394 aa8.51□□□□□ -1.05
YRF1-1YDR545W FYV10P40492 516 aa8.5□□□□□ -1.05
YRF1-1YDR545W NTH2P35172 780 aa8.5□□□□□ -1.05
YRF1-1YDR545W CTK3P46963 296 aaPredicted RBP8.5□□□□□ -1.05
YRF1-1YDR545W NKP1Q12493 238 aa8.5□□□□□ -1.05
YRF1-1YDR545W CNS1P33313 385 aa8.5□□□□□ -1.05
YRF1-1YDR545W APL4Q12028 832 aa8.5□□□□□ -1.05
YRF1-1YDR545W BUD14P27637 709 aa8.5□□□□□ -1.05
YRF1-1YDR545W UTP5Q04177 643 aaKnown RBP8.5□□□□□ -1.05
YRF1-1YDR545W NBL1Q3E7Y6 73 aa8.5□□□□□ -1.05
YRF1-1YDR545W NUP133P36161 1157 aa8.49□□□□□ -1.05
YRF1-1YDR545W SEC27P41811 889 aaKnown RBP8.49□□□□□ -1.05
YRF1-1YDR545W SWC3P31376 625 aa8.49□□□□□ -1.05
YRF1-1YDR545W PPH3P32345 308 aa8.49□□□□□ -1.05
YRF1-1YDR545W SKI2P35207 1287 aaKnown RBP RIP-Chip data8.49□□□□□ -1.05not detected
YRF1-1YDR545W MUD2P36084 527 aaKnown RBP8.49□□□□□ -1.05
YRF1-1YDR545W CIC1P38779 376 aaKnown RBP8.49□□□□□ -1.05
YRF1-1YDR545W GIR2Q03768 265 aaPredicted RBP8.49□□□□□ -1.05
YRF1-1YDR545W VAC14Q06708 880 aa8.49□□□□□ -1.05
YRF1-1YDR545W AAP1P37898 856 aaKnown RBP8.49□□□□□ -1.05
YRF1-1YDR545W SEC9P40357 651 aa8.49□□□□□ -1.05
YRF1-1YDR545W RLP24Q07915 199 aaKnown RBP8.49□□□□□ -1.05
YRF1-1YDR545W SGM1P47166 707 aa8.49□□□□□ -1.05
YRF1-1YDR545W CDC3P32457 520 aaKnown RBP8.48□□□□□ -1.05
YRF1-1YDR545W TFC3P34111 1160 aa8.48□□□□□ -1.05
YRF1-1YDR545W YLR287CQ05881 355 aa8.48□□□□□ -1.05
YRF1-1YDR545W ADE17P38009 592 aaKnown RBP8.48□□□□□ -1.05
YRF1-1YDR545W BOI2P39969 1040 aa8.48□□□□□ -1.05
YRF1-1YDR545W YNL144CP53907 740 aa8.48□□□□□ -1.05
YRF1-1YDR545W IMP2'P32351 346 aa8.48□□□□□ -1.05
YRF1-1YDR545W LOS1P33418 1100 aaPredicted RBP8.48□□□□□ -1.05
YRF1-1YDR545W ALF1P53904 254 aa8.48□□□□□ -1.05
YRF1-1YDR545W RRP15Q06511 250 aaPredicted RBP8.48□□□□□ -1.05
YRF1-1YDR545W RRP6Q12149 733 aaKnown RBP8.48□□□□□ -1.05
YRF1-1YDR545W GCD2P12754 651 aaPredicted RBP8.48□□□□□ -1.05
YRF1-1YDR545W PRE10P21242 288 aaKnown RBP RIP-Chip data8.48□□□□□ -1.05not detected
YRF1-1YDR545W YGR122WP53272 402 aa8.48□□□□□ -1.05
YRF1-1YDR545W YDR338CQ05497 695 aa8.48□□□□□ -1.05
YRF1-1YDR545W NOP56Q12460 504 aaKnown RBP RIP-Chip data8.48□□□□□ -1.05 RIP-Chip
YRF1-1YDR545W MTF2P10849 440 aa8.48□□□□□ -1.05
YRF1-1YDR545W OPY2Q06810 360 aa8.48□□□□□ -1.05
YRF1-1YDR545W RAD4P14736 754 aa8.47□□□□□ -1.05
YRF1-1YDR545W DPH5P32469 300 aaPredicted RBP8.47□□□□□ -1.05
YRF1-1YDR545W PXA1P41909 870 aa8.47□□□□□ -1.05
YRF1-1YDR545W LAM1P38851 1228 aa8.47□□□□□ -1.05
YRF1-1YDR545W GRX3Q03835 250 aa8.47□□□□□ -1.05
YRF1-1YDR545W YMR085WP0CF18 432 aa8.47□□□□□ -1.05
YRF1-1YDR545W KTR1P27810 393 aaKnown RBP8.47□□□□□ -1.05
YRF1-1YDR545W YOL057WQ08225 711 aa8.47□□□□□ -1.05
YRF1-1YDR545W SSA2P10592 639 aaKnown RBP8.46□□□□□ -1.05
YRF1-1YDR545W PGI1P12709 554 aaKnown RBP8.46□□□□□ -1.05
YRF1-1YDR545W ECM32P32644 1121 aaKnown RBP8.46□□□□□ -1.05
YRF1-1YDR545W SSE1P32589 693 aaKnown RBP8.46□□□□□ -1.06
YRF1-1YDR545W HUL4P40985 892 aa8.46□□□□□ -1.06
YRF1-1YDR545W GTR1Q00582 310 aa8.46□□□□□ -1.06
YRF1-1YDR545W YPL150WQ12152 901 aa8.46□□□□□ -1.06
YRF1-1YDR545W KCC4P25389 1037 aa8.45□□□□□ -1.06
YRF1-1YDR545W YKR023WP36119 530 aaKnown RBP8.45□□□□□ -1.06
YRF1-1YDR545W APL5Q08951 932 aaKnown RBP8.45□□□□□ -1.06
YRF1-1YDR545W SRP40P32583 406 aaPredicted RBP8.45□□□□□ -1.06
YRF1-1YDR545W UBC6P33296 250 aaPredicted RBP8.45□□□□□ -1.06
YRF1-1YDR545W SFB2P53953 876 aa8.45□□□□□ -1.06
YRF1-1YDR545W IMH1Q06704 911 aaKnown RBP8.45□□□□□ -1.06
YRF1-1YDR545W EFM2P38347 419 aa8.45□□□□□ -1.06
YRF1-1YDR545W HCA4P20448 770 aaKnown RBP8.44□□□□□ -1.06
YRF1-1YDR545W EXO84P38261 753 aa8.44□□□□□ -1.06
YRF1-1YDR545W SEC65P29478 273 aa8.44□□□□□ -1.06
YRF1-1YDR545W MPH1P40562 993 aa8.44□□□□□ -1.06
YRF1-1YDR545W CTF4Q01454 927 aa8.44□□□□□ -1.06
YRF1-1YDR545W ERV41Q04651 352 aa8.44□□□□□ -1.06
YRF1-1YDR545W MAD1P40957 749 aa8.44□□□□□ -1.06
YRF1-1YDR545W ISW1P38144 1129 aa8.44□□□□□ -1.06
YRF1-1YDR545W YSW1P38280 609 aa8.44□□□□□ -1.06
YRF1-1YDR545W BET4Q00618 327 aa8.44□□□□□ -1.06
YRF1-1YDR545W CMS1Q07897 291 aaKnown RBP8.44□□□□□ -1.06
YRF1-1YDR545W RPB2P08518 1224 aaKnown RBP8.44□□□□□ -1.06
YRF1-1YDR545W PRP16P15938 1071 aaPredicted RBP8.44□□□□□ -1.06
YRF1-1YDR545W MIC19P43594 170 aa8.44□□□□□ -1.06
YRF1-1YDR545W DNM1P54861 757 aa8.44□□□□□ -1.06
YRF1-1YDR545W PKH1Q03407 766 aa8.44□□□□□ -1.06
YRF1-1YDR545W YKR018CP36114 725 aa8.43□□□□□ -1.06
YRF1-1YDR545W CSC1Q06538 782 aa8.43□□□□□ -1.06
YRF1-1YDR545W NUP188P52593 1655 aaKnown RBP8.43□□□□□ -1.06
YRF1-1YDR545W GAL11P19659 1081 aa8.43□□□□□ -1.06
YRF1-1YDR545W SMC2P38989 1170 aaKnown RBP8.43□□□□□ -1.06
YRF1-1YDR545W ZPR1P53303 486 aaKnown RBP8.43□□□□□ -1.06
YRF1-1YDR545W MCX1P38323 520 aaPredicted RBP8.43□□□□□ -1.06
YRF1-1YDR545W DAS1P47005 663 aa8.43□□□□□ -1.06
YRF1-1YDR545W NUR1Q12066 484 aa8.43□□□□□ -1.06
YRF1-1YDR545W PGA3Q12746 312 aaKnown RBP8.43□□□□□ -1.06
YRF1-1YDR545W MIF2P35201 549 aa8.43□□□□□ -1.06
YRF1-1YDR545W VPS8P39702 1274 aa8.43□□□□□ -1.06
YRF1-1YDR545W UFD2P54860 961 aa8.42□□□□□ -1.06
YRF1-1YDR545W PFK2P16862 959 aaKnown RBP RIP-Chip data8.42□□□□□ -1.06not detected
Retrieved 100 of 5,963 RNA–protein pairs in 286.1 ms