RNA–Protein interactions for RNA: YDR406W

PDR15, Transcript of Plasma membrane ATP binding cassette (ABC) transporter, yeast

Gene PDR15, Length 4,590 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDR15	YDR406W	PPX1	P38698	397 aa		5.22	□□□□□ -1.57
PDR15	YDR406W	BDH2	P39713	417 aa		5.22	□□□□□ -1.57
PDR15	YDR406W	REF2	P42073	533 aa	Predicted RBP	5.22	□□□□□ -1.57
PDR15	YDR406W	RIX7	Q07844	837 aa	Known RBP	5.22	□□□□□ -1.57
PDR15	YDR406W	SSB1	P11484	613 aa	Known RBP	5.22	□□□□□ -1.57
PDR15	YDR406W	SPC110	P32380	944 aa		5.22	□□□□□ -1.57
PDR15	YDR406W	SAS3	P34218	831 aa		5.22	□□□□□ -1.57
PDR15	YDR406W	ISW1	P38144	1129 aa		5.22	□□□□□ -1.57
PDR15	YDR406W	SSB2	P40150	613 aa	Known RBP	5.22	□□□□□ -1.57
PDR15	YDR406W	ENT3	P47160	408 aa		5.22	□□□□□ -1.57
PDR15	YDR406W	CWH41	P53008	833 aa		5.22	□□□□□ -1.57
PDR15	YDR406W	ENV11	P53246	860 aa		5.22	□□□□□ -1.57
PDR15	YDR406W	NYV1	Q12255	253 aa		5.22	□□□□□ -1.57
PDR15	YDR406W	COX6	P00427	148 aa		5.22	□□□□□ -1.57
PDR15	YDR406W	SEC18	P18759	758 aa	Known RBP	5.22	□□□□□ -1.57
PDR15	YDR406W	NPA3	P47122	385 aa		5.22	□□□□□ -1.57
PDR15	YDR406W	SAS4	Q04003	481 aa		5.22	□□□□□ -1.57
PDR15	YDR406W	YMR074C	Q04773	145 aa		5.22	□□□□□ -1.57
PDR15	YDR406W	GLN1	P32288	370 aa	Known RBP	5.21	□□□□□ -1.57
PDR15	YDR406W	RTC4	P53850	401 aa		5.21	□□□□□ -1.57
PDR15	YDR406W	BDF2	Q07442	638 aa		5.21	□□□□□ -1.57
PDR15	YDR406W	YDL121C	Q07541	149 aa		5.21	□□□□□ -1.57
PDR15	YDR406W	NOB1	Q08444	459 aa	Known RBP	5.21	□□□□□ -1.57
PDR15	YDR406W	YOL098C	Q12496	1037 aa		5.21	□□□□□ -1.57
PDR15	YDR406W	OPI1	P21957	404 aa		5.21	□□□□□ -1.58
PDR15	YDR406W	BDF1	P35817	686 aa		5.21	□□□□□ -1.58
PDR15	YDR406W	TFG1	P41895	735 aa	Predicted RBP	5.21	□□□□□ -1.58
PDR15	YDR406W	AAD16	Q02895	342 aa		5.21	□□□□□ -1.58
PDR15	YDR406W	MRD1	Q06106	887 aa	Known RBP	5.21	□□□□□ -1.58
PDR15	YDR406W	PRX1	P34227	261 aa	Known RBP	5.21	□□□□□ -1.58
PDR15	YDR406W	FAF1	P40546	346 aa	Predicted RBP	5.21	□□□□□ -1.58
PDR15	YDR406W	UTP22	P53254	1237 aa	Predicted RBP	5.21	□□□□□ -1.58
PDR15	YDR406W	LCD1	Q04377	747 aa		5.21	□□□□□ -1.58
PDR15	YDR406W	DPH6	Q12429	685 aa		5.21	□□□□□ -1.58
PDR15	YDR406W	SAC3	P46674	1301 aa		5.21	□□□□□ -1.58
PDR15	YDR406W	MRC1	P25588	1096 aa		5.21	□□□□□ -1.58
PDR15	YDR406W	MET1	P36150	593 aa		5.21	□□□□□ -1.58
PDR15	YDR406W	TFG2	P41896	400 aa	Predicted RBP	5.21	□□□□□ -1.58
PDR15	YDR406W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	5.21	□□□□□ -1.58	not detected
PDR15	YDR406W	PEX19	Q07418	342 aa		5.21	□□□□□ -1.58
PDR15	YDR406W	GRX6	Q12438	231 aa		5.21	□□□□□ -1.58
PDR15	YDR406W	YMR147W	P40218	223 aa	Known RBP	5.2	□□□□□ -1.58
PDR15	YDR406W	RSC1	P53236	928 aa		5.2	□□□□□ -1.58
PDR15	YDR406W	SWI6	P09959	803 aa		5.2	□□□□□ -1.58
PDR15	YDR406W	YKL023W	P36103	277 aa	Known RBP	5.2	□□□□□ -1.58
PDR15	YDR406W	GTT3	P39996	337 aa		5.2	□□□□□ -1.58
PDR15	YDR406W	HXT10	P43581	546 aa		5.2	□□□□□ -1.58
PDR15	YDR406W	IRC8	P47046	822 aa		5.2	□□□□□ -1.58
PDR15	YDR406W	CTF18	P49956	741 aa		5.2	□□□□□ -1.58
PDR15	YDR406W	TFB3	Q03290	321 aa		5.2	□□□□□ -1.58
PDR15	YDR406W	RPN4	Q03465	531 aa		5.2	□□□□□ -1.58
PDR15	YDR406W	RPN7	Q06103	429 aa	Known RBP	5.2	□□□□□ -1.58
PDR15	YDR406W	PEP3	P27801	918 aa		5.2	□□□□□ -1.58
PDR15	YDR406W	GLC3	P32775	704 aa		5.2	□□□□□ -1.58
PDR15	YDR406W	YHL017W	P38745	532 aa		5.2	□□□□□ -1.58
PDR15	YDR406W	HAP5	Q02516	242 aa		5.2	□□□□□ -1.58
PDR15	YDR406W	RTP1	Q12751	981 aa		5.2	□□□□□ -1.58
PDR15	YDR406W	RVS167	P39743	482 aa	Known RBP	5.19	□□□□□ -1.58
PDR15	YDR406W	VID28	P40547	921 aa		5.19	□□□□□ -1.58
PDR15	YDR406W	YIL177C	P40434	1758 aa		5.19	□□□□□ -1.58
PDR15	YDR406W	YJL225C	P40889	1758 aa		5.19	□□□□□ -1.58
PDR15	YDR406W	THI3	Q07471	609 aa		5.19	□□□□□ -1.58
PDR15	YDR406W	TAH18	Q12181	623 aa		5.19	□□□□□ -1.58
PDR15	YDR406W	RPN12	P32496	274 aa		5.19	□□□□□ -1.58
PDR15	YDR406W	NOC2	P39744	710 aa	Known RBP	5.19	□□□□□ -1.58
PDR15	YDR406W	PIL1	P53252	339 aa	Known RBP	5.19	□□□□□ -1.58
PDR15	YDR406W	CRF1	Q04930	467 aa		5.19	□□□□□ -1.58
PDR15	YDR406W	MSC6	Q08818	692 aa	Known RBP	5.19	□□□□□ -1.58
PDR15	YDR406W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	5.19	□□□□□ -1.58	not detected
PDR15	YDR406W	RRN3	P36070	627 aa		5.19	□□□□□ -1.58
PDR15	YDR406W	CCT5	P40413	562 aa	Known RBP	5.19	□□□□□ -1.58
PDR15	YDR406W	HRQ1	Q05549	1077 aa		5.19	□□□□□ -1.58
PDR15	YDR406W	TRL1	P09880	827 aa	Known RBP	5.18	□□□□□ -1.58
PDR15	YDR406W	DID4	P36108	232 aa		5.18	□□□□□ -1.58
PDR15	YDR406W	PIP2	P52960	996 aa		5.18	□□□□□ -1.58
PDR15	YDR406W	UBP10	P53874	792 aa	Predicted RBP	5.18	□□□□□ -1.58
PDR15	YDR406W	SGD1	Q06132	899 aa		5.18	□□□□□ -1.58
PDR15	YDR406W	ELG1	Q12050	791 aa		5.18	□□□□□ -1.58
PDR15	YDR406W	APC11	Q12157	165 aa		5.18	□□□□□ -1.58
PDR15	YDR406W	AI2	P03876	854 aa		5.18	□□□□□ -1.58
PDR15	YDR406W	MDL2	P33311	773 aa		5.18	□□□□□ -1.58
PDR15	YDR406W	PGA3	Q12746	312 aa	Known RBP	5.18	□□□□□ -1.58
PDR15	YDR406W	POM152	P39685	1337 aa		5.18	□□□□□ -1.58
PDR15	YDR406W	DCD1	P06773	312 aa		5.18	□□□□□ -1.58
PDR15	YDR406W	SYF1	Q04048	859 aa	Predicted RBP	5.18	□□□□□ -1.58
PDR15	YDR406W	VMS1	Q04311	632 aa	Known RBP	5.18	□□□□□ -1.58
PDR15	YDR406W	CSM3	Q04659	317 aa		5.18	□□□□□ -1.58
PDR15	YDR406W	SPN1	Q06505	410 aa	Predicted RBP	5.18	□□□□□ -1.58
PDR15	YDR406W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	5.18	□□□□□ -1.58	not detected
PDR15	YDR406W	BUD31	P25337	157 aa	Predicted RBP	5.18	□□□□□ -1.58
PDR15	YDR406W	AIM9	P40053	627 aa	Known RBP	5.18	□□□□□ -1.58
PDR15	YDR406W	HYR1	P40581	163 aa	Known RBP	5.18	□□□□□ -1.58
PDR15	YDR406W	YJR107W	P47145	328 aa		5.18	□□□□□ -1.58
PDR15	YDR406W	SES1	P07284	462 aa	Known RBP	5.17	□□□□□ -1.58
PDR15	YDR406W	MGM1	P32266	881 aa		5.17	□□□□□ -1.58
PDR15	YDR406W	YKR018C	P36114	725 aa		5.17	□□□□□ -1.58
PDR15	YDR406W	JJJ2	P46997	583 aa		5.17	□□□□□ -1.58
PDR15	YDR406W	EST2	Q06163	884 aa		5.17	□□□□□ -1.58
PDR15	YDR406W	HCA4	P20448	770 aa	Known RBP	5.17	□□□□□ -1.58
PDR15	YDR406W	UBP16	Q02863	499 aa		5.17	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms