RNA–Protein interactions for RNA: YDR244W

PEX5, Transcript of Peroxisomal membrane signal receptor for peroxisomal matrix proteins, yeast

Gene PEX5, Length 1,839 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX5	YDR244W	TRK1	P12685	1235 aa		4.23	□□□□□ -1.73
PEX5	YDR244W	PDC6	P26263	563 aa	Known RBP	4.23	□□□□□ -1.73
PEX5	YDR244W	HST3	P53687	447 aa		4.23	□□□□□ -1.73
PEX5	YDR244W	ALG12	P53730	551 aa		4.23	□□□□□ -1.73
PEX5	YDR244W	FAR11	P53917	953 aa		4.23	□□□□□ -1.73
PEX5	YDR244W	ULP1	Q02724	621 aa		4.23	□□□□□ -1.73
PEX5	YDR244W	BDF2	Q07442	638 aa		4.23	□□□□□ -1.73
PEX5	YDR244W	PSH1	Q12161	406 aa		4.23	□□□□□ -1.73
PEX5	YDR244W	CDC4	P07834	779 aa		4.22	□□□□□ -1.73
PEX5	YDR244W	PRI2	P20457	528 aa		4.22	□□□□□ -1.73
PEX5	YDR244W	AFT1	P22149	690 aa		4.22	□□□□□ -1.73
PEX5	YDR244W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
PEX5	YDR244W	DLD1	P32891	587 aa		4.22	□□□□□ -1.73
PEX5	YDR244W	RRP14	P36080	434 aa	Known RBP	4.22	□□□□□ -1.73
PEX5	YDR244W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
PEX5	YDR244W	FPR3	P38911	411 aa	Known RBP	4.22	□□□□□ -1.73
PEX5	YDR244W	CTR9	P89105	1077 aa		4.22	□□□□□ -1.73
PEX5	YDR244W	CUS1	Q02554	436 aa	Predicted RBP	4.22	□□□□□ -1.73
PEX5	YDR244W	ADI1	Q03677	179 aa		4.22	□□□□□ -1.73
PEX5	YDR244W	EMG1	Q06287	252 aa	Known RBP	4.22	□□□□□ -1.73
PEX5	YDR244W	TY1A-DR3	Q12441	440 aa		4.22	□□□□□ -1.73
PEX5	YDR244W	SRF1	Q12516	437 aa		4.22	□□□□□ -1.73
PEX5	YDR244W	COB	P00163	385 aa		4.21	□□□□□ -1.74
PEX5	YDR244W	GRX1	P25373	110 aa	Known RBP	4.21	□□□□□ -1.74
PEX5	YDR244W	SLA1	P32790	1244 aa		4.21	□□□□□ -1.74
PEX5	YDR244W	NUT1	P53114	1132 aa		4.21	□□□□□ -1.74
PEX5	YDR244W	TDA5	Q06417	326 aa	Known RBP	4.21	□□□□□ -1.74
PEX5	YDR244W	LEU1	P07264	779 aa	Known RBP	4.21	□□□□□ -1.74
PEX5	YDR244W	PYC2	P32327	1180 aa	Known RBP	4.21	□□□□□ -1.74
PEX5	YDR244W	DAL1	P32375	460 aa		4.21	□□□□□ -1.74
PEX5	YDR244W	ASH1	P34233	588 aa		4.21	□□□□□ -1.74
PEX5	YDR244W	AIR1	P40507	360 aa	Known RBP	4.21	□□□□□ -1.74
PEX5	YDR244W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
PEX5	YDR244W	NAN1	Q02931	896 aa	Known RBP	4.21	□□□□□ -1.74
PEX5	YDR244W	MSH6	Q03834	1242 aa		4.21	□□□□□ -1.74
PEX5	YDR244W	FAL1	Q12099	399 aa	Known RBP	4.21	□□□□□ -1.74
PEX5	YDR244W	RAD4	P14736	754 aa		4.2	□□□□□ -1.74
PEX5	YDR244W	DUT1	P33317	147 aa		4.2	□□□□□ -1.74
PEX5	YDR244W	SQT1	P35184	431 aa		4.2	□□□□□ -1.74
PEX5	YDR244W	TAT2	P38967	592 aa		4.2	□□□□□ -1.74
PEX5	YDR244W	PIC2	P40035	300 aa		4.2	□□□□□ -1.74
PEX5	YDR244W	YIL165C	P40446	119 aa		4.2	□□□□□ -1.74
PEX5	YDR244W	BUD6	P41697	788 aa		4.2	□□□□□ -1.74
PEX5	YDR244W	VTC4	P47075	721 aa		4.2	□□□□□ -1.74
PEX5	YDR244W	PTK2	P47116	818 aa	Known RBP	4.2	□□□□□ -1.74
PEX5	YDR244W	YJR115W	P47152	169 aa		4.2	□□□□□ -1.74
PEX5	YDR244W	MRL1	Q06815	381 aa		4.2	□□□□□ -1.74
PEX5	YDR244W	OPI10	Q08202	246 aa		4.2	□□□□□ -1.74
PEX5	YDR244W	GCR1	P07261	785 aa		4.19	□□□□□ -1.74
PEX5	YDR244W	RVS167	P39743	482 aa	Known RBP	4.19	□□□□□ -1.74
PEX5	YDR244W	TIM54	P47045	478 aa		4.19	□□□□□ -1.74
PEX5	YDR244W	RSM26	P47141	266 aa		4.19	□□□□□ -1.74
PEX5	YDR244W	SKP1	P52286	194 aa		4.19	□□□□□ -1.74
PEX5	YDR244W	HUL5	P53119	910 aa		4.19	□□□□□ -1.74
PEX5	YDR244W	ITC1	P53125	1264 aa		4.19	□□□□□ -1.74
PEX5	YDR244W	YGR053C	P53234	283 aa		4.19	□□□□□ -1.74
PEX5	YDR244W	PMT7	Q06644	662 aa		4.19	□□□□□ -1.74
PEX5	YDR244W	RTT10	Q08924	1013 aa		4.19	□□□□□ -1.74
PEX5	YDR244W	RGP1	P16664	663 aa		4.18	□□□□□ -1.74
PEX5	YDR244W	DUR3	P33413	735 aa		4.18	□□□□□ -1.74
PEX5	YDR244W	SPF1	P39986	1215 aa	Known RBP	4.18	□□□□□ -1.74
PEX5	YDR244W	XKS1	P42826	600 aa		4.18	□□□□□ -1.74
PEX5	YDR244W	YJR098C	P47139	656 aa		4.18	□□□□□ -1.74
PEX5	YDR244W	YKL069W	P36088	180 aa		4.18	□□□□□ -1.74
PEX5	YDR244W	APM2	P38700	605 aa		4.18	□□□□□ -1.74
PEX5	YDR244W	TMA46	Q12000	345 aa	Known RBP	4.18	□□□□□ -1.74
PEX5	YDR244W	BAS1	P22035	811 aa		4.17	□□□□□ -1.74
PEX5	YDR244W	SAP155	P43612	1002 aa		4.17	□□□□□ -1.74
PEX5	YDR244W	LSC2	P53312	427 aa		4.17	□□□□□ -1.74
PEX5	YDR244W	POB3	Q04636	552 aa	Known RBP	4.17	□□□□□ -1.74
PEX5	YDR244W	RAD27	P26793	382 aa		4.16	□□□□□ -1.74
PEX5	YDR244W	NUP85	P46673	744 aa		4.16	□□□□□ -1.74
PEX5	YDR244W	UBP15	P50101	1230 aa		4.16	□□□□□ -1.74
PEX5	YDR244W	EEB1	Q02891	456 aa		4.16	□□□□□ -1.74
PEX5	YDR244W	CCP1	P00431	361 aa		4.16	□□□□□ -1.74
PEX5	YDR244W	MET6	P05694	767 aa	Known RBP	4.16	□□□□□ -1.74
PEX5	YDR244W	NCL1	P38205	684 aa	Known RBP	4.16	□□□□□ -1.74
PEX5	YDR244W	PEX28	P38848	579 aa		4.16	□□□□□ -1.74
PEX5	YDR244W	NUP82	P40368	713 aa		4.16	□□□□□ -1.74
PEX5	YDR244W	PPT1	P53043	513 aa		4.16	□□□□□ -1.74
PEX5	YDR244W	TYW3	P53177	273 aa		4.16	□□□□□ -1.74
PEX5	YDR244W	YNR040W	P53736	256 aa		4.16	□□□□□ -1.74
PEX5	YDR244W	KRE33	P53914	1056 aa	Known RBP	4.16	□□□□□ -1.74
PEX5	YDR244W	SEC23	P15303	768 aa	Known RBP	4.15	□□□□□ -1.75
PEX5	YDR244W	TIM23	P32897	222 aa		4.15	□□□□□ -1.75
PEX5	YDR244W	RIM11	P38615	370 aa		4.15	□□□□□ -1.75
PEX5	YDR244W	PEX13	P80667	386 aa		4.15	□□□□□ -1.75
PEX5	YDR244W	PPM2	Q08282	695 aa		4.15	□□□□□ -1.75
PEX5	YDR244W	TCB1	Q12466	1186 aa		4.15	□□□□□ -1.75
PEX5	YDR244W	CMR1	Q12510	522 aa	Known RBP	4.15	□□□□□ -1.75
PEX5	YDR244W	FUS1	P11710	512 aa		4.14	□□□□□ -1.75
PEX5	YDR244W	MNN1	P39106	762 aa		4.14	□□□□□ -1.75
PEX5	YDR244W	YER156C	P40093	338 aa	Known RBP	4.14	□□□□□ -1.75
PEX5	YDR244W	GNP1	P48813	663 aa		4.14	□□□□□ -1.75
PEX5	YDR244W	YGL140C	P53120	1219 aa		4.14	□□□□□ -1.75
PEX5	YDR244W	RSC2	Q06488	889 aa		4.14	□□□□□ -1.75
PEX5	YDR244W	RPP1A	P05318	106 aa	Predicted RBP	4.14	□□□□□ -1.75
PEX5	YDR244W	PHO8	P11491	566 aa		4.14	□□□□□ -1.75
PEX5	YDR244W	TAF13	P11747	167 aa		4.14	□□□□□ -1.75
PEX5	YDR244W	NPR1	P22211	790 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms