RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C CDC3P32457 520 aaKnown RBP5.17□□□□□ -1.58
SNU56YDR240C KAE1P36132 386 aa5.17□□□□□ -1.58
SNU56YDR240C LEM3P42838 414 aa5.17□□□□□ -1.58
SNU56YDR240C UFD2P54860 961 aa5.17□□□□□ -1.58
SNU56YDR240C FUS1P11710 512 aa5.16□□□□□ -1.58
SNU56YDR240C PSY2P40164 858 aa5.16□□□□□ -1.58
SNU56YDR240C INP51P40559 946 aaKnown RBP5.16□□□□□ -1.58
SNU56YDR240C GUP1P53154 560 aa5.16□□□□□ -1.58
SNU56YDR240C TIF6Q12522 245 aaKnown RBP5.16□□□□□ -1.58
SNU56YDR240C YKR073CP36153 106 aa5.15□□□□□ -1.58
SNU56YDR240C GLO3P38682 493 aaKnown RBP5.15□□□□□ -1.58
SNU56YDR240C ACF4P47129 309 aa5.15□□□□□ -1.58
SNU56YDR240C BIO5P53744 561 aaKnown RBP5.15□□□□□ -1.58
SNU56YDR240C SOG2Q08817 791 aa5.15□□□□□ -1.58
SNU56YDR240C YLR122CQ12312 125 aa5.15□□□□□ -1.58
SNU56YDR240C TRP3P00937 484 aa5.14□□□□□ -1.59
SNU56YDR240C RSC6P25632 483 aa5.14□□□□□ -1.59
SNU56YDR240C GIP2P40036 548 aa5.14□□□□□ -1.59
SNU56YDR240C QDR1P40475 563 aa5.14□□□□□ -1.59
SNU56YDR240C YJL181WP46987 611 aa5.14□□□□□ -1.59
SNU56YDR240C ALD3P54114 506 aa5.14□□□□□ -1.59
SNU56YDR240C TY4B-PA0A0B7P3V8 1104 aa5.13□□□□□ -1.59
SNU56YDR240C SOK2P53438 785 aaPredicted RBP5.13□□□□□ -1.59
SNU56YDR240C TY4A-HQ6Q5P6 413 aa5.13□□□□□ -1.59
SNU56YDR240C TED1P40533 473 aa5.13□□□□□ -1.59
SNU56YDR240C DSE4P53753 1117 aa5.13□□□□□ -1.59
SNU56YDR240C LIP5P32875 414 aa5.12□□□□□ -1.59
SNU56YDR240C TFA2P36145 328 aa5.12□□□□□ -1.59
SNU56YDR240C TOS1P38288 455 aa5.12□□□□□ -1.59
SNU56YDR240C RSC4Q02206 625 aa5.12□□□□□ -1.59
SNU56YDR240C TAF7Q05021 590 aa5.12□□□□□ -1.59
SNU56YDR240C AOS1Q06624 347 aa5.12□□□□□ -1.59
SNU56YDR240C PUB1P32588 453 aaKnown RBP RIP-Chip data5.11□□□□□ -1.59 RIP-Chip
SNU56YDR240C SAF1P38352 637 aa5.11□□□□□ -1.59
SNU56YDR240C TRS120Q04183 1289 aa5.11□□□□□ -1.59
SNU56YDR240C TRL1P09880 827 aaKnown RBP5.1□□□□□ -1.59
SNU56YDR240C HVG1P0CE11 249 aa5.1□□□□□ -1.59
SNU56YDR240C PYC2P32327 1180 aaKnown RBP5.1□□□□□ -1.59
SNU56YDR240C PAN5P38787 379 aa5.1□□□□□ -1.59
SNU56YDR240C CHS2P14180 963 aa5.09□□□□□ -1.59
SNU56YDR240C CTH1P47976 325 aa5.09□□□□□ -1.59
SNU56YDR240C SPO71Q03868 1245 aa5.09□□□□□ -1.59
SNU56YDR240C GLO4Q12320 285 aa5.09□□□□□ -1.59
SNU56YDR240C TY1A-NL1Q12391 440 aaKnown RBP5.09□□□□□ -1.59
SNU56YDR240C ELM1P32801 640 aa5.08□□□□□ -1.6
SNU56YDR240C YJR124CP47159 448 aa5.07□□□□□ -1.6
SNU56YDR240C YGR130CP53278 816 aa5.07□□□□□ -1.6
SNU56YDR240C YNL011CP53980 444 aa5.07□□□□□ -1.6
SNU56YDR240C CDC55Q00362 526 aa5.07□□□□□ -1.6
SNU56YDR240C BRE4Q07660 1125 aa5.07□□□□□ -1.6
SNU56YDR240C YBL113CQ7M4S9 792 aa5.07□□□□□ -1.6
SNU56YDR240C ERP5P38819 212 aa5.07□□□□□ -1.6
SNU56YDR240C POL5P39985 1022 aaKnown RBP5.07□□□□□ -1.6
SNU56YDR240C FET4P40988 552 aa5.07□□□□□ -1.6
SNU56YDR240C YNR065CP53751 1116 aa5.07□□□□□ -1.6
SNU56YDR240C CTR9P89105 1077 aa5.07□□□□□ -1.6
SNU56YDR240C MAE1P36013 669 aaKnown RBP5.06□□□□□ -1.6
SNU56YDR240C GRS1P38088 690 aaKnown RBP5.06□□□□□ -1.6
SNU56YDR240C NEO1P40527 1151 aa5.06□□□□□ -1.6
SNU56YDR240C MDJ2P42834 146 aa5.06□□□□□ -1.6
SNU56YDR240C MSH6Q03834 1242 aa5.06□□□□□ -1.6
SNU56YDR240C BSC2Q05611 235 aa5.06□□□□□ -1.6
SNU56YDR240C ELG1Q12050 791 aa5.06□□□□□ -1.6
SNU56YDR240C MNL2Q12205 849 aa5.06□□□□□ -1.6
SNU56YDR240C HAT1Q12341 374 aa5.06□□□□□ -1.6
SNU56YDR240C ECM2P38241 364 aaKnown RBP5.05□□□□□ -1.6
SNU56YDR240C AKR1P39010 764 aa5.05□□□□□ -1.6
SNU56YDR240C HAS1Q03532 505 aaKnown RBP5.05□□□□□ -1.6
SNU56YDR240C PUF3Q07807 879 aaKnown RBP RIP-Chip data5.05□□□□□ -1.6not detected
SNU56YDR240C FAR11P53917 953 aa5.04□□□□□ -1.6
SNU56YDR240C MAG2Q06436 670 aaKnown RBP5.04□□□□□ -1.6
SNU56YDR240C REC8Q12188 680 aa5.04□□□□□ -1.6
SNU56YDR240C RIM11P38615 370 aa5.03□□□□□ -1.6
SNU56YDR240C SPO74P45819 413 aa5.03□□□□□ -1.6
SNU56YDR240C CYC7P00045 113 aa5.02□□□□□ -1.61
SNU56YDR240C COBP00163 385 aa5.02□□□□□ -1.61
SNU56YDR240C PRP5P21372 849 aaPredicted RBP5.02□□□□□ -1.61
SNU56YDR240C NAM7P30771 971 aaKnown RBP5.02□□□□□ -1.61
SNU56YDR240C SAP155P43612 1002 aa5.02□□□□□ -1.61
SNU56YDR240C NUT2Q06213 157 aa5.02□□□□□ -1.61
SNU56YDR240C YLL054CQ12244 843 aa5.02□□□□□ -1.61
SNU56YDR240C FLP1P03870 423 aa5.01□□□□□ -1.61
SNU56YDR240C NPR1P22211 790 aa5.01□□□□□ -1.61
SNU56YDR240C SSF1P38789 453 aaPredicted RBP5.01□□□□□ -1.61
SNU56YDR240C SAM37P50110 327 aa5.01□□□□□ -1.61
SNU56YDR240C NCE103P53615 221 aa5.01□□□□□ -1.61
SNU56YDR240C YIG1Q08956 461 aa5.01□□□□□ -1.61
SNU56YDR240C CMR1Q12510 522 aaKnown RBP5.01□□□□□ -1.61
SNU56YDR240C FRT1Q99332 602 aa5.01□□□□□ -1.61
SNU56YDR240C YHL008CP38750 627 aa5□□□□□ -1.61
SNU56YDR240C GCV1P48015 400 aa5□□□□□ -1.61
SNU56YDR240C PMT7Q06644 662 aa5□□□□□ -1.61
SNU56YDR240C ERS1P17261 260 aa4.99□□□□□ -1.61
SNU56YDR240C CIC1P38779 376 aaKnown RBP4.99□□□□□ -1.61
SNU56YDR240C STM1P39015 273 aaKnown RBP4.99□□□□□ -1.61
SNU56YDR240C NOC3Q07896 663 aaPredicted RBP4.99□□□□□ -1.61
SNU56YDR240C YOR223WQ12015 292 aa4.99□□□□□ -1.61
SNU56YDR240C HTS1P07263 546 aaKnown RBP4.98□□□□□ -1.61
SNU56YDR240C MSB1P21339 1137 aaKnown RBP4.98□□□□□ -1.61
SNU56YDR240C PPX1P38698 397 aa4.98□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 36.8 ms