RNA–Protein interactions for RNA: YDR190C

RVB1, Transcript of ATP-dependent DNA helicase, also known as pontin, yeast

Gene RVB1, Length 1,392 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RVB1	YDR190C	YPR084W	Q06821	456 aa		5.68	□□□□□ -1.5
RVB1	YDR190C	SLM3	Q12093	417 aa		5.68	□□□□□ -1.5
RVB1	YDR190C	PDC1	P06169	563 aa	Known RBP	5.67	□□□□□ -1.5
RVB1	YDR190C	SNF7	P39929	240 aa	Known RBP	5.67	□□□□□ -1.5
RVB1	YDR190C	PAC1	P39946	494 aa	Known RBP	5.67	□□□□□ -1.5
RVB1	YDR190C	APL6	P46682	809 aa		5.67	□□□□□ -1.5
RVB1	YDR190C	FKS3	Q04952	1785 aa		5.67	□□□□□ -1.5
RVB1	YDR190C	RAD4	P14736	754 aa		5.67	□□□□□ -1.5
RVB1	YDR190C	PHO87	P25360	923 aa		5.67	□□□□□ -1.5
RVB1	YDR190C	SWC3	P31376	625 aa		5.67	□□□□□ -1.5
RVB1	YDR190C	STM1	P39015	273 aa	Known RBP	5.67	□□□□□ -1.5
RVB1	YDR190C	PTC2	P39966	464 aa	Known RBP	5.67	□□□□□ -1.5
RVB1	YDR190C	XKS1	P42826	600 aa		5.67	□□□□□ -1.5
RVB1	YDR190C	ZDS2	P54786	942 aa		5.67	□□□□□ -1.5
RVB1	YDR190C	YEL077C	Q3E7X8	1277 aa		5.67	□□□□□ -1.5
RVB1	YDR190C	RPS19A	P07280	144 aa	Known RBP	5.66	□□□□□ -1.5
RVB1	YDR190C	RPS19B	P07281	144 aa	Predicted RBP	5.66	□□□□□ -1.5
RVB1	YDR190C	HAP4	P14064	554 aa		5.66	□□□□□ -1.5
RVB1	YDR190C	ROX1	P25042	368 aa		5.66	□□□□□ -1.5
RVB1	YDR190C	DLD1	P32891	587 aa		5.66	□□□□□ -1.5
RVB1	YDR190C	VPS24	P36095	224 aa	Known RBP	5.66	□□□□□ -1.5
RVB1	YDR190C	BRN1	P38170	754 aa		5.66	□□□□□ -1.5
RVB1	YDR190C	NMD2	P38798	1089 aa	Known RBP	5.66	□□□□□ -1.5
RVB1	YDR190C	HXT10	P43581	546 aa		5.66	□□□□□ -1.5
RVB1	YDR190C	SNU71	P53207	620 aa	Known RBP	5.66	□□□□□ -1.5
RVB1	YDR190C	NSE3	Q05541	303 aa		5.66	□□□□□ -1.5
RVB1	YDR190C	SOH1	P38633	127 aa		5.65	□□□□□ -1.51
RVB1	YDR190C	RRN7	P40992	514 aa		5.65	□□□□□ -1.51
RVB1	YDR190C	CTF4	Q01454	927 aa		5.65	□□□□□ -1.51
RVB1	YDR190C	CWC15	Q03772	175 aa	Known RBP	5.65	□□□□□ -1.51
RVB1	YDR190C	YML082W	Q04533	649 aa	Known RBP	5.65	□□□□□ -1.51
RVB1	YDR190C	YOL057W	Q08225	711 aa		5.65	□□□□□ -1.51
RVB1	YDR190C	EDE1	P34216	1381 aa		5.64	□□□□□ -1.51
RVB1	YDR190C	RAD50	P12753	1312 aa		5.64	□□□□□ -1.51
RVB1	YDR190C	MRP7	P12687	371 aa		5.64	□□□□□ -1.51
RVB1	YDR190C	KCC4	P25389	1037 aa		5.64	□□□□□ -1.51
RVB1	YDR190C	VAC17	P25591	423 aa		5.64	□□□□□ -1.51
RVB1	YDR190C	UGA3	P26370	528 aa		5.64	□□□□□ -1.51
RVB1	YDR190C	ACS2	P52910	683 aa	Known RBP	5.64	□□□□□ -1.51
RVB1	YDR190C	ECM16	Q04217	1267 aa	Known RBP	5.64	□□□□□ -1.51
RVB1	YDR190C	RGA2	Q06407	1009 aa		5.64	□□□□□ -1.51
RVB1	YDR190C	ALE1	Q08548	619 aa		5.64	□□□□□ -1.51
RVB1	YDR190C	TCB1	Q12466	1186 aa		5.64	□□□□□ -1.51
RVB1	YDR190C	YBL113C	Q7M4S9	792 aa		5.64	□□□□□ -1.51
RVB1	YDR190C	MSP1	P28737	362 aa		5.63	□□□□□ -1.51
RVB1	YDR190C	SEC20	P28791	383 aa		5.63	□□□□□ -1.51
RVB1	YDR190C	HXT13	P39924	564 aa		5.63	□□□□□ -1.51
RVB1	YDR190C	SLN1	P39928	1220 aa	Predicted RBP	5.63	□□□□□ -1.51
RVB1	YDR190C	BDP1	P46678	594 aa		5.63	□□□□□ -1.51
RVB1	YDR190C	ITC1	P53125	1264 aa		5.63	□□□□□ -1.51
RVB1	YDR190C	HXT17	P53631	564 aa		5.63	□□□□□ -1.51
RVB1	YDR190C	GCR2	Q01722	534 aa		5.63	□□□□□ -1.51
RVB1	YDR190C	INP54	Q08227	384 aa	Known RBP	5.63	□□□□□ -1.51
RVB1	YDR190C	YPR015C	Q12531	247 aa		5.63	□□□□□ -1.51
RVB1	YDR190C	TSC13	Q99190	310 aa		5.63	□□□□□ -1.51
RVB1	YDR190C	NUP145	P49687	1317 aa		5.62	□□□□□ -1.51
RVB1	YDR190C	SPT16	P32558	1035 aa	Known RBP	5.62	□□□□□ -1.51
RVB1	YDR190C	RMD1	Q03441	430 aa		5.62	□□□□□ -1.51
RVB1	YDR190C	KAR5	Q04746	504 aa		5.62	□□□□□ -1.51
RVB1	YDR190C	SRS2	P12954	1174 aa		5.61	□□□□□ -1.51
RVB1	YDR190C	ARL1	P38116	183 aa	Known RBP	5.61	□□□□□ -1.51
RVB1	YDR190C	ERP5	P38819	212 aa		5.61	□□□□□ -1.51
RVB1	YDR190C	BOI2	P39969	1040 aa		5.61	□□□□□ -1.51
RVB1	YDR190C	RRD1	P40454	393 aa	Known RBP	5.61	□□□□□ -1.51
RVB1	YDR190C	ROM1	P53046	1155 aa		5.61	□□□□□ -1.51
RVB1	YDR190C	YDR306C	Q06640	478 aa		5.61	□□□□□ -1.51
RVB1	YDR190C	LSP1	Q12230	341 aa	Known RBP	5.61	□□□□□ -1.51
RVB1	YDR190C	VAS1	P07806	1104 aa	Known RBP	5.6	□□□□□ -1.51
RVB1	YDR190C	OSM1	P21375	501 aa	Known RBP	5.6	□□□□□ -1.51
RVB1	YDR190C	ASF1	P32447	279 aa		5.6	□□□□□ -1.51
RVB1	YDR190C	GCD7	P32502	381 aa	Predicted RBP	5.6	□□□□□ -1.51
RVB1	YDR190C	RRN6	P32786	894 aa		5.6	□□□□□ -1.51
RVB1	YDR190C	TPS3	P38426	1054 aa	Known RBP	5.6	□□□□□ -1.51
RVB1	YDR190C	YFL034W	P43564	1073 aa		5.6	□□□□□ -1.51
RVB1	YDR190C	YGL081W	P53156	320 aa		5.6	□□□□□ -1.51
RVB1	YDR190C	MOD5	P07884	428 aa		5.59	□□□□□ -1.51
RVB1	YDR190C	TRL1	P09880	827 aa	Known RBP	5.59	□□□□□ -1.51
RVB1	YDR190C	NUP133	P36161	1157 aa		5.59	□□□□□ -1.51
RVB1	YDR190C	PRE3	P38624	215 aa		5.59	□□□□□ -1.51
RVB1	YDR190C	ADE16	P54113	591 aa	Known RBP	5.59	□□□□□ -1.51
RVB1	YDR190C	VPS64	Q03944	604 aa		5.59	□□□□□ -1.51
RVB1	YDR190C	PNP1	Q05788	311 aa		5.59	□□□□□ -1.51
RVB1	YDR190C	MSC6	Q08818	692 aa	Known RBP	5.59	□□□□□ -1.51
RVB1	YDR190C	YRF1-3	P0CX14	1859 aa		5.59	□□□□□ -1.52
RVB1	YDR190C	YRF1-7	P0CX15	1859 aa		5.59	□□□□□ -1.52
RVB1	YDR190C	YRF1-6	P53819	1859 aa		5.59	□□□□□ -1.52
RVB1	YDR190C	LPD1	P09624	499 aa	Known RBP	5.58	□□□□□ -1.52
RVB1	YDR190C	CDC16	P09798	840 aa		5.58	□□□□□ -1.52
RVB1	YDR190C	VAN1	P23642	535 aa		5.58	□□□□□ -1.52
RVB1	YDR190C	KNS1	P32350	737 aa	Predicted RBP	5.58	□□□□□ -1.52
RVB1	YDR190C	IXR1	P33417	597 aa		5.58	□□□□□ -1.52
RVB1	YDR190C	APL2	P36000	726 aa	Predicted RBP	5.58	□□□□□ -1.52
RVB1	YDR190C	NPA3	P47122	385 aa		5.58	□□□□□ -1.52
RVB1	YDR190C	SAS4	Q04003	481 aa		5.58	□□□□□ -1.52
RVB1	YDR190C	VPS20	Q04272	221 aa		5.58	□□□□□ -1.52
RVB1	YDR190C	PUN1	Q06991	263 aa		5.58	□□□□□ -1.52
RVB1	YDR190C	ENT1	Q12518	454 aa		5.58	□□□□□ -1.52
RVB1	YDR190C	CST6	P40535	587 aa		5.57	□□□□□ -1.52
RVB1	YDR190C	DNM1	P54861	757 aa		5.57	□□□□□ -1.52
RVB1	YDR190C	MEC3	Q02574	474 aa		5.57	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms