RNA–Protein interactions for RNA: YDR180W

SCC2, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeastyeast

Gene SCC2, Length 4,482 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCC2YDR180W SUT1P53032 299 aaKnown RBP1.28□□□□□ -2.21
SCC2YDR180W MPC54Q08550 464 aa1.28□□□□□ -2.21
SCC2YDR180W AI4P03878 556 aa1.27□□□□□ -2.21
SCC2YDR180W TEC1P18412 486 aa1.27□□□□□ -2.21
SCC2YDR180W RRP14P36080 434 aaKnown RBP1.27□□□□□ -2.21
SCC2YDR180W MNN1P39106 762 aa1.27□□□□□ -2.21
SCC2YDR180W ATG1P53104 897 aa1.27□□□□□ -2.21
SCC2YDR180W HUL5P53119 910 aa1.27□□□□□ -2.21
SCC2YDR180W YGL082WP53155 381 aa1.27□□□□□ -2.21
SCC2YDR180W UBP3Q01477 912 aaKnown RBP RIP-Chip data1.27□□□□□ -2.21 RIP-Chip
SCC2YDR180W PEX29Q03370 554 aa1.27□□□□□ -2.21
SCC2YDR180W STE20Q03497 939 aaKnown RBP1.27□□□□□ -2.21
SCC2YDR180W PML39Q03760 334 aa1.27□□□□□ -2.21
SCC2YDR180W GPI13Q07830 1017 aa1.27□□□□□ -2.21
SCC2YDR180W YRF1-3P0CX14 1859 aa1.27□□□□□ -2.21
SCC2YDR180W YRF1-7P0CX15 1859 aa1.27□□□□□ -2.21
SCC2YDR180W YRF1-6P53819 1859 aa1.27□□□□□ -2.21
SCC2YDR180W BNI1P41832 1953 aa1.27□□□□□ -2.21
SCC2YDR180W SRS2P12954 1174 aa1.27□□□□□ -2.21
SCC2YDR180W PHO87P25360 923 aa1.27□□□□□ -2.21
SCC2YDR180W ISC10P32645 267 aa1.27□□□□□ -2.21
SCC2YDR180W NPL4P33755 580 aa1.27□□□□□ -2.21
SCC2YDR180W PBP2P38151 413 aaKnown RBP RIP-Chip data1.27□□□□□ -2.21not detected
SCC2YDR180W PPX1P38698 397 aa1.27□□□□□ -2.21
SCC2YDR180W HAL5P38970 855 aaKnown RBP1.27□□□□□ -2.21
SCC2YDR180W TFG1P41895 735 aaPredicted RBP1.27□□□□□ -2.21
SCC2YDR180W DAK2P43550 591 aa1.27□□□□□ -2.21
SCC2YDR180W ISM1P48526 1002 aa1.27□□□□□ -2.21
SCC2YDR180W FMP30Q02883 468 aa1.27□□□□□ -2.21
SCC2YDR180W ISR1Q06098 443 aaKnown RBP1.27□□□□□ -2.21
SCC2YDR180W BDS1Q08347 646 aa1.27□□□□□ -2.21
SCC2YDR180W LSP1Q12230 341 aaKnown RBP1.27□□□□□ -2.21
SCC2YDR180W RVB2Q12464 471 aaKnown RBP1.27□□□□□ -2.21
SCC2YDR180W RPC31P17890 251 aa1.27□□□□□ -2.21
SCC2YDR180W VPS27P40343 622 aaKnown RBP1.27□□□□□ -2.21
SCC2YDR180W ESBP6P53918 673 aa1.27□□□□□ -2.21
SCC2YDR180W VPS16Q03308 798 aa1.27□□□□□ -2.21
SCC2YDR180W ECM16Q04217 1267 aaKnown RBP1.27□□□□□ -2.21
SCC2YDR180W TOS4Q06266 489 aa1.27□□□□□ -2.21
SCC2YDR180W RGA2Q06407 1009 aa1.27□□□□□ -2.21
SCC2YDR180W YOL057WQ08225 711 aa1.27□□□□□ -2.21
SCC2YDR180W SLP1Q12232 587 aa1.27□□□□□ -2.21
SCC2YDR180W YOR131CQ12486 218 aa1.27□□□□□ -2.21
SCC2YDR180W YBL029C-AQ3E756 94 aa1.27□□□□□ -2.21
SCC2YDR180W TSC13Q99190 310 aa1.27□□□□□ -2.21
SCC2YDR180W TY1B-AO13527 1196 aaKnown RBP1.27□□□□□ -2.21
SCC2YDR180W HAP4P14064 554 aa1.27□□□□□ -2.21
SCC2YDR180W GUT2P32191 649 aa1.27□□□□□ -2.21
SCC2YDR180W SPT16P32558 1035 aaKnown RBP1.27□□□□□ -2.21
SCC2YDR180W ORM1P53224 222 aa1.27□□□□□ -2.21
SCC2YDR180W NMA111P53920 997 aa1.27□□□□□ -2.21
SCC2YDR180W YMR102CQ03177 834 aa1.27□□□□□ -2.21
SCC2YDR180W RIF1P29539 1916 aa1.26□□□□□ -2.21
SCC2YDR180W MET6P05694 767 aaKnown RBP1.26□□□□□ -2.21
SCC2YDR180W DAL7P21826 554 aa1.26□□□□□ -2.21
SCC2YDR180W TIM23P32897 222 aa1.26□□□□□ -2.21
SCC2YDR180W RKM3P38222 552 aa1.26□□□□□ -2.21
SCC2YDR180W YHL008CP38750 627 aa1.26□□□□□ -2.21
SCC2YDR180W PAC1P39946 494 aaKnown RBP1.26□□□□□ -2.21
SCC2YDR180W YEN1P40028 759 aa1.26□□□□□ -2.21
SCC2YDR180W MPH1P40562 993 aa1.26□□□□□ -2.21
SCC2YDR180W APL6P46682 809 aa1.26□□□□□ -2.21
SCC2YDR180W YJR107WP47145 328 aa1.26□□□□□ -2.21
SCC2YDR180W NAF1P53919 492 aaKnown RBP1.26□□□□□ -2.21
SCC2YDR180W DPL1Q05567 589 aa1.26□□□□□ -2.21
SCC2YDR180W HDA3Q06623 655 aa1.26□□□□□ -2.21
SCC2YDR180W PLP2Q12017 286 aa1.26□□□□□ -2.21
SCC2YDR180W SSF2Q12153 453 aaPredicted RBP1.26□□□□□ -2.21
SCC2YDR180W MCM1P11746 286 aa1.26□□□□□ -2.21
SCC2YDR180W SUI2P20459 304 aaKnown RBP1.26□□□□□ -2.21
SCC2YDR180W GRX1P25373 110 aaKnown RBP1.26□□□□□ -2.21
SCC2YDR180W SUV3P32580 737 aa1.26□□□□□ -2.21
SCC2YDR180W SWE1P32944 819 aa1.26□□□□□ -2.21
SCC2YDR180W HCS1P34243 683 aa1.26□□□□□ -2.21
SCC2YDR180W NTH2P35172 780 aa1.26□□□□□ -2.21
SCC2YDR180W SRL3P36167 246 aa1.26□□□□□ -2.21
SCC2YDR180W FUN12P39730 1002 aaKnown RBP1.26□□□□□ -2.21
SCC2YDR180W AIM9P40053 627 aaKnown RBP1.26□□□□□ -2.21
SCC2YDR180W STR2P47164 639 aa1.26□□□□□ -2.21
SCC2YDR180W FAA4P47912 694 aaKnown RBP1.26□□□□□ -2.21
SCC2YDR180W PIL1P53252 339 aaKnown RBP1.26□□□□□ -2.21
SCC2YDR180W ELP4Q02884 456 aaKnown RBP1.26□□□□□ -2.21
SCC2YDR180W GDE1Q02979 1223 aa1.26□□□□□ -2.21
SCC2YDR180W NSE3Q05541 303 aa1.26□□□□□ -2.21
SCC2YDR180W FRA1Q07825 749 aa1.26□□□□□ -2.21
SCC2YDR180W NFI1Q12216 726 aa1.26□□□□□ -2.21
SCC2YDR180W YGR161W-CQ3E744 92 aa1.26□□□□□ -2.21
SCC2YDR180W TRA1P38811 3744 aa1.26□□□□□ -2.21
SCC2YDR180W MOT1P32333 1867 aa1.26□□□□□ -2.21
SCC2YDR180W SUP35P05453 685 aaKnown RBP1.26□□□□□ -2.21
SCC2YDR180W RAM1P22007 431 aa1.26□□□□□ -2.21
SCC2YDR180W ERT1P38140 529 aa1.26□□□□□ -2.21
SCC2YDR180W POL5P39985 1022 aaKnown RBP1.26□□□□□ -2.21
SCC2YDR180W PEA2P40091 420 aa1.26□□□□□ -2.21
SCC2YDR180W NUP82P40368 713 aa1.26□□□□□ -2.21
SCC2YDR180W AIM21P40563 679 aa1.26□□□□□ -2.21
SCC2YDR180W TIM54P47045 478 aa1.26□□□□□ -2.21
SCC2YDR180W MTR4P47047 1073 aaKnown RBP1.26□□□□□ -2.21
SCC2YDR180W YJR142WP47173 342 aa1.26□□□□□ -2.21
SCC2YDR180W APP1P53933 587 aa1.26□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 36.6 ms