RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W UBX7P38349 436 aa4.08□□□□□ -1.76
VPS41YDR080W TAF7Q05021 590 aa4.08□□□□□ -1.76
VPS41YDR080W Q0182Q9ZZW1 134 aa4.08□□□□□ -1.76
VPS41YDR080W TRK2P28584 889 aa4.08□□□□□ -1.76
VPS41YDR080W NAB2P32505 525 aaKnown RBP RIP-Chip data4.08□□□□□ -1.76not detected
VPS41YDR080W MSC7P38694 644 aa4.08□□□□□ -1.76
VPS41YDR080W CWC15Q03772 175 aaKnown RBP4.07□□□□□ -1.76
VPS41YDR080W MRPL16P38064 232 aa4.06□□□□□ -1.76
VPS41YDR080W YGR035CP53222 116 aa4.06□□□□□ -1.76
VPS41YDR080W YDR461C-AQ2V2P7 80 aa4.06□□□□□ -1.76
VPS41YDR080W RPC31P17890 251 aa4.05□□□□□ -1.76
VPS41YDR080W YFL066CP43538 392 aa4.05□□□□□ -1.76
VPS41YDR080W KRE33P53914 1056 aaKnown RBP4.05□□□□□ -1.76
VPS41YDR080W SSA4P22202 642 aaKnown RBP4.05□□□□□ -1.76
VPS41YDR080W YBR197CP38306 217 aa4.05□□□□□ -1.76
VPS41YDR080W LYS5P50113 272 aa4.05□□□□□ -1.76
VPS41YDR080W UTP4Q06679 776 aaKnown RBP4.05□□□□□ -1.76
VPS41YDR080W ADE12P80210 433 aaKnown RBP4.04□□□□□ -1.76
VPS41YDR080W GEA1P47102 1408 aaPredicted RBP4.04□□□□□ -1.76
VPS41YDR080W ALD4P46367 519 aaKnown RBP4.04□□□□□ -1.76
VPS41YDR080W DPH6Q12429 685 aa4.04□□□□□ -1.76
VPS41YDR080W RGP1P16664 663 aa4.03□□□□□ -1.76
VPS41YDR080W MDJ1P35191 511 aa4.03□□□□□ -1.76
VPS41YDR080W SKP1P52286 194 aa4.03□□□□□ -1.76
VPS41YDR080W STB3Q12427 513 aa4.03□□□□□ -1.76
VPS41YDR080W BOI1P38041 980 aaKnown RBP4.03□□□□□ -1.76
VPS41YDR080W YMR265CQ03508 461 aaKnown RBP4.03□□□□□ -1.76
VPS41YDR080W BCK1Q01389 1478 aa4.03□□□□□ -1.76
VPS41YDR080W VAN1P23642 535 aa4.02□□□□□ -1.77
VPS41YDR080W SCD5P34758 872 aa4.02□□□□□ -1.77
VPS41YDR080W CEM1P39525 442 aa4.02□□□□□ -1.77
VPS41YDR080W YNR040WP53736 256 aa4.02□□□□□ -1.77
VPS41YDR080W YRF1-2P40105 1681 aa4.02□□□□□ -1.77
VPS41YDR080W MRPL33P20084 86 aa4.02□□□□□ -1.77
VPS41YDR080W THI12P42883 340 aa4.01□□□□□ -1.77
VPS41YDR080W THI5P43534 340 aa4.01□□□□□ -1.77
VPS41YDR080W THI11P47183 340 aa4.01□□□□□ -1.77
VPS41YDR080W CUS1Q02554 436 aaPredicted RBP4.01□□□□□ -1.77
VPS41YDR080W TY1A-DR2Q03964 440 aaKnown RBP4.01□□□□□ -1.77
VPS41YDR080W THI13Q07748 340 aa4.01□□□□□ -1.77
VPS41YDR080W VMA3P25515 160 aa4.01□□□□□ -1.77
VPS41YDR080W QDR2P40474 542 aa4.01□□□□□ -1.77
VPS41YDR080W PUF6Q04373 656 aaKnown RBP4.01□□□□□ -1.77
VPS41YDR080W PDR5P33302 1511 aaKnown RBP4.01□□□□□ -1.77
VPS41YDR080W GPM1P00950 247 aaKnown RBP4□□□□□ -1.77
VPS41YDR080W BOL3P39724 118 aa4□□□□□ -1.77
VPS41YDR080W MTO1P53070 669 aa4□□□□□ -1.77
VPS41YDR080W FOX2Q02207 900 aaKnown RBP4□□□□□ -1.77
VPS41YDR080W TRS33Q99394 268 aa4□□□□□ -1.77
VPS41YDR080W MRP10O75012 95 aa3.99□□□□□ -1.77
VPS41YDR080W ITC1P53125 1264 aa3.99□□□□□ -1.77
VPS41YDR080W SRB8P25648 1427 aa3.99□□□□□ -1.77
VPS41YDR080W KAP122P32767 1081 aa3.99□□□□□ -1.77
VPS41YDR080W SBE2P42223 864 aaKnown RBP3.99□□□□□ -1.77
VPS41YDR080W PUN1Q06991 263 aa3.99□□□□□ -1.77
VPS41YDR080W SRS2P12954 1174 aa3.99□□□□□ -1.77
VPS41YDR080W ISC10P32645 267 aa3.99□□□□□ -1.77
VPS41YDR080W PNP1Q05788 311 aa3.99□□□□□ -1.77
VPS41YDR080W APC11Q12157 165 aa3.99□□□□□ -1.77
VPS41YDR080W FPS1P23900 669 aa3.98□□□□□ -1.77
VPS41YDR080W BSD2P38356 321 aa3.98□□□□□ -1.77
VPS41YDR080W IPL1P38991 367 aa3.98□□□□□ -1.77
VPS41YDR080W PDC5P16467 563 aaKnown RBP3.97□□□□□ -1.77
VPS41YDR080W EDE1P34216 1381 aa3.97□□□□□ -1.77
VPS41YDR080W RPB10P22139 70 aa3.96□□□□□ -1.77
VPS41YDR080W APM2P38700 605 aa3.96□□□□□ -1.78
VPS41YDR080W PRK1P40494 810 aa3.96□□□□□ -1.78
VPS41YDR080W IDI1P15496 288 aa3.96□□□□□ -1.78
VPS41YDR080W MSN1P22148 382 aa3.96□□□□□ -1.78
VPS41YDR080W YMR074CQ04773 145 aa3.96□□□□□ -1.78
VPS41YDR080W KNS1P32350 737 aaPredicted RBP3.95□□□□□ -1.78
VPS41YDR080W YTA6P40328 754 aa3.95□□□□□ -1.78
VPS41YDR080W YOR296WQ08748 1289 aa3.95□□□□□ -1.78
VPS41YDR080W GCN2P15442 1659 aa3.95□□□□□ -1.78
VPS41YDR080W CFT1Q06632 1357 aaKnown RBP3.95□□□□□ -1.78
VPS41YDR080W RGD2P43556 714 aa3.95□□□□□ -1.78
VPS41YDR080W LSO1Q3E827 93 aa3.95□□□□□ -1.78
VPS41YDR080W NUP192P47054 1683 aa3.94□□□□□ -1.78
VPS41YDR080W CWH41P53008 833 aa3.94□□□□□ -1.78
VPS41YDR080W THI72Q08579 599 aa3.94□□□□□ -1.78
VPS41YDR080W TRL1P09880 827 aaKnown RBP3.94□□□□□ -1.78
VPS41YDR080W PDR11P40550 1411 aa3.93□□□□□ -1.78
VPS41YDR080W EMG1Q06287 252 aaKnown RBP3.93□□□□□ -1.78
VPS41YDR080W TDA6Q06466 467 aa3.93□□□□□ -1.78
VPS41YDR080W YCK2P23292 546 aaKnown RBP3.93□□□□□ -1.78
VPS41YDR080W ICP55P40051 511 aa3.93□□□□□ -1.78
VPS41YDR080W GIP1P38229 639 aa3.93□□□□□ -1.78
VPS41YDR080W YER156CP40093 338 aaKnown RBP3.93□□□□□ -1.78
VPS41YDR080W AI1P03875 834 aa3.92□□□□□ -1.78
VPS41YDR080W NAR1P23503 491 aaKnown RBP3.92□□□□□ -1.78
VPS41YDR080W DYS1P38791 387 aa3.92□□□□□ -1.78
VPS41YDR080W RRP5Q05022 1729 aaKnown RBP3.92□□□□□ -1.78
VPS41YDR080W SSA1P10591 642 aaKnown RBP3.92□□□□□ -1.78
VPS41YDR080W NSG2P53898 299 aa3.92□□□□□ -1.78
VPS41YDR080W HEH2Q03281 663 aa3.92□□□□□ -1.78
VPS41YDR080W SKN7P38889 622 aa3.91□□□□□ -1.78
VPS41YDR080W YIL165CP40446 119 aa3.91□□□□□ -1.78
VPS41YDR080W LDH1P38139 375 aa3.91□□□□□ -1.78
VPS41YDR080W NCL1P38205 684 aaKnown RBP3.91□□□□□ -1.78
VPS41YDR080W HXT8P40886 569 aa3.91□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 47.4 ms