RNA–Protein interactions for RNA: YDR054C

CDC34, Transcript of Ubiquitin-conjugating enzyme (E2), yeastyeast

Gene CDC34, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC34YDR054C MVP1P40959 511 aaKnown RBP7.34□□□□□ -1.23
CDC34YDR054C GAL2P13181 574 aa7.33□□□□□ -1.24
CDC34YDR054C MDJ2P42834 146 aa7.33□□□□□ -1.24
CDC34YDR054C ALD3P54114 506 aa7.33□□□□□ -1.24
CDC34YDR054C NKP2Q06162 153 aa7.33□□□□□ -1.24
CDC34YDR054C MAG2Q06436 670 aaKnown RBP7.33□□□□□ -1.24
CDC34YDR054C STB3Q12427 513 aa7.33□□□□□ -1.24
CDC34YDR054C VMA1P17255 1071 aaKnown RBP7.32□□□□□ -1.24
CDC34YDR054C TSR4P25040 408 aa7.32□□□□□ -1.24
CDC34YDR054C BDP1P46678 594 aa7.32□□□□□ -1.24
CDC34YDR054C YKL091CP33324 310 aaKnown RBP7.31□□□□□ -1.24
CDC34YDR054C UGA2P38067 497 aa7.31□□□□□ -1.24
CDC34YDR054C RFC1P38630 861 aaKnown RBP7.31□□□□□ -1.24
CDC34YDR054C GTT3P39996 337 aa7.31□□□□□ -1.24
CDC34YDR054C TFG1P41895 735 aaPredicted RBP7.31□□□□□ -1.24
CDC34YDR054C RAT1Q02792 1006 aaKnown RBP7.31□□□□□ -1.24
CDC34YDR054C UBP16Q02863 499 aa7.31□□□□□ -1.24
CDC34YDR054C SSK22P25390 1331 aaPredicted RBP7.3□□□□□ -1.24
CDC34YDR054C MET1P36150 593 aa7.3□□□□□ -1.24
CDC34YDR054C KTR3P38130 404 aaPredicted RBP7.3□□□□□ -1.24
CDC34YDR054C TPS3P38426 1054 aaKnown RBP7.3□□□□□ -1.24
CDC34YDR054C ATG1P53104 897 aa7.3□□□□□ -1.24
CDC34YDR054C MTC5Q03897 1148 aa7.3□□□□□ -1.24
CDC34YDR054C CAF20P12962 161 aaKnown RBP7.29□□□□□ -1.24
CDC34YDR054C VAC8P39968 578 aa7.29□□□□□ -1.24
CDC34YDR054C YJR107WP47145 328 aa7.29□□□□□ -1.24
CDC34YDR054C NAF1P53919 492 aaKnown RBP7.29□□□□□ -1.24
CDC34YDR054C RMD1Q03441 430 aa7.29□□□□□ -1.24
CDC34YDR054C CWC15Q03772 175 aaKnown RBP7.29□□□□□ -1.24
CDC34YDR054C BDF2Q07442 638 aa7.29□□□□□ -1.24
CDC34YDR054C MCM16Q12262 181 aa7.29□□□□□ -1.24
CDC34YDR054C SAC3P46674 1301 aa7.28□□□□□ -1.24
CDC34YDR054C CDC16P09798 840 aa7.28□□□□□ -1.24
CDC34YDR054C RPP1BP10622 106 aaKnown RBP7.28□□□□□ -1.24
CDC34YDR054C RDS2P19541 446 aaKnown RBP7.28□□□□□ -1.24
CDC34YDR054C NAB3P38996 802 aaKnown RBP RIP-Chip data7.28□□□□□ -1.24not detected
CDC34YDR054C ALG12P53730 551 aa7.28□□□□□ -1.24
CDC34YDR054C YPR109WQ06104 294 aa7.28□□□□□ -1.24
CDC34YDR054C CSC1Q06538 782 aa7.28□□□□□ -1.24
CDC34YDR054C UTP10P42945 1769 aaKnown RBP7.28□□□□□ -1.24
CDC34YDR054C NOT3P06102 836 aaKnown RBP7.27□□□□□ -1.25
CDC34YDR054C SIT4P20604 311 aa7.27□□□□□ -1.25
CDC34YDR054C ECM21P38167 1117 aaKnown RBP7.27□□□□□ -1.25
CDC34YDR054C RSC30P38781 883 aa7.27□□□□□ -1.25
CDC34YDR054C ECM16Q04217 1267 aaKnown RBP7.27□□□□□ -1.25
CDC34YDR054C POB3Q04636 552 aaKnown RBP7.27□□□□□ -1.25
CDC34YDR054C GYP5Q12344 894 aa7.27□□□□□ -1.25
CDC34YDR054C SNU66Q12420 587 aaPredicted RBP7.27□□□□□ -1.25
CDC34YDR054C NCB2Q92317 146 aa7.27□□□□□ -1.25
CDC34YDR054C RAD50P12753 1312 aa7.27□□□□□ -1.25
CDC34YDR054C PDR18P53756 1333 aa7.27□□□□□ -1.25
CDC34YDR054C SEC18P18759 758 aaKnown RBP7.26□□□□□ -1.25
CDC34YDR054C NGR1P32831 672 aaKnown RBP7.26□□□□□ -1.25
CDC34YDR054C MAD1P40957 749 aa7.26□□□□□ -1.25
CDC34YDR054C PIB1Q06651 286 aa7.26□□□□□ -1.25
CDC34YDR054C FUR4P05316 633 aaKnown RBP7.25□□□□□ -1.25
CDC34YDR054C SUP35P05453 685 aaKnown RBP7.25□□□□□ -1.25
CDC34YDR054C CIT2P08679 460 aa7.25□□□□□ -1.25
CDC34YDR054C SSB1P11484 613 aaKnown RBP7.25□□□□□ -1.25
CDC34YDR054C SMY1P32364 656 aaKnown RBP7.25□□□□□ -1.25
CDC34YDR054C SOL3P38858 249 aa7.25□□□□□ -1.25
CDC34YDR054C SSB2P40150 613 aaKnown RBP7.25□□□□□ -1.25
CDC34YDR054C YGL242CP53066 181 aa7.25□□□□□ -1.25
CDC34YDR054C ALD6P54115 500 aaKnown RBP7.25□□□□□ -1.25
CDC34YDR054C ALO1P54783 526 aaKnown RBP7.25□□□□□ -1.25
CDC34YDR054C SYF1Q04048 859 aaPredicted RBP7.25□□□□□ -1.25
CDC34YDR054C PNP1Q05788 311 aa7.25□□□□□ -1.25
CDC34YDR054C RPN7Q06103 429 aaKnown RBP7.25□□□□□ -1.25
CDC34YDR054C NUT2Q06213 157 aa7.25□□□□□ -1.25
CDC34YDR054C DIB1Q06819 143 aaPredicted RBP7.25□□□□□ -1.25
CDC34YDR054C SLY41P22215 453 aa7.24□□□□□ -1.25
CDC34YDR054C MGM1P32266 881 aa7.24□□□□□ -1.25
CDC34YDR054C FRD1P32614 470 aaKnown RBP7.24□□□□□ -1.25
CDC34YDR054C YJL049WP47048 450 aa7.24□□□□□ -1.25
CDC34YDR054C EAF6P47128 113 aa7.24□□□□□ -1.25
CDC34YDR054C MSN5P52918 1224 aa7.24□□□□□ -1.25
CDC34YDR054C YNL193WP53870 558 aa7.24□□□□□ -1.25
CDC34YDR054C IRC3Q06683 689 aa7.24□□□□□ -1.25
CDC34YDR054C THI3Q07471 609 aa7.24□□□□□ -1.25
CDC34YDR054C GIN4Q12263 1142 aa7.24□□□□□ -1.25
CDC34YDR054C ADR1P07248 1323 aa7.24□□□□□ -1.25
CDC34YDR054C GAP1P19145 602 aaPredicted RBP7.23□□□□□ -1.25
CDC34YDR054C PFF1P38244 976 aa7.23□□□□□ -1.25
CDC34YDR054C GLO3P38682 493 aaKnown RBP7.23□□□□□ -1.25
CDC34YDR054C IOC3P43596 787 aa7.23□□□□□ -1.25
CDC34YDR054C MLC1P53141 149 aa7.23□□□□□ -1.25
CDC34YDR054C PIB2P53191 635 aa7.23□□□□□ -1.25
CDC34YDR054C MRPS35P53292 345 aa7.23□□□□□ -1.25
CDC34YDR054C UBP3Q01477 912 aaKnown RBP RIP-Chip data7.23□□□□□ -1.25not detected
CDC34YDR054C SAS4Q04003 481 aa7.23□□□□□ -1.25
CDC34YDR054C MNL2Q12205 849 aa7.23□□□□□ -1.25
CDC34YDR054C DPH6Q12429 685 aa7.23□□□□□ -1.25
CDC34YDR054C VAS1P07806 1104 aaKnown RBP7.22□□□□□ -1.25
CDC34YDR054C PDR1P12383 1068 aa7.22□□□□□ -1.25
CDC34YDR054C PHO87P25360 923 aa7.22□□□□□ -1.25
CDC34YDR054C DLD1P32891 587 aa7.22□□□□□ -1.25
CDC34YDR054C ERT1P38140 529 aa7.22□□□□□ -1.25
CDC34YDR054C SPL2P38839 148 aa7.22□□□□□ -1.25
CDC34YDR054C BOL3P39724 118 aa7.22□□□□□ -1.25
CDC34YDR054C HXT13P39924 564 aa7.22□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms