RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeastyeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRP1YDR007W PPG1P32838 368 aa7.96□□□□□ -1.14
TRP1YDR007W AIR1P40507 360 aaKnown RBP7.96□□□□□ -1.14
TRP1YDR007W PTK2P47116 818 aaKnown RBP7.96□□□□□ -1.14
TRP1YDR007W MON1P53129 644 aa7.96□□□□□ -1.14
TRP1YDR007W CTR9P89105 1077 aa7.96□□□□□ -1.14
TRP1YDR007W CUS1Q02554 436 aaPredicted RBP7.96□□□□□ -1.14
TRP1YDR007W ULP1Q02724 621 aa7.96□□□□□ -1.14
TRP1YDR007W TY1A-DR3Q12441 440 aa7.96□□□□□ -1.14
TRP1YDR007W CDC34P14682 295 aa7.95□□□□□ -1.14
TRP1YDR007W UGA4P32837 571 aa7.95□□□□□ -1.14
TRP1YDR007W VTC4P47075 721 aa7.95□□□□□ -1.14
TRP1YDR007W NUT1P53114 1132 aa7.95□□□□□ -1.14
TRP1YDR007W ADI1Q03677 179 aa7.95□□□□□ -1.14
TRP1YDR007W RVS167P39743 482 aaKnown RBP7.94□□□□□ -1.14
TRP1YDR007W YIL165CP40446 119 aa7.94□□□□□ -1.14
TRP1YDR007W CDC53Q12018 815 aaKnown RBP7.94□□□□□ -1.14
TRP1YDR007W YOR131CQ12486 218 aa7.94□□□□□ -1.14
TRP1YDR007W GRX1P25373 110 aaKnown RBP7.93□□□□□ -1.14
TRP1YDR007W FAA4P47912 694 aaKnown RBP7.93□□□□□ -1.14
TRP1YDR007W SKP1P52286 194 aa7.93□□□□□ -1.14
TRP1YDR007W COBP00163 385 aa7.92□□□□□ -1.14
TRP1YDR007W CIT2P08679 460 aa7.92□□□□□ -1.14
TRP1YDR007W PYC2P32327 1180 aaKnown RBP7.92□□□□□ -1.14
TRP1YDR007W LSC2P53312 427 aa7.92□□□□□ -1.14
TRP1YDR007W RPN4Q03465 531 aa7.92□□□□□ -1.14
TRP1YDR007W MSH6Q03834 1242 aa7.92□□□□□ -1.14
TRP1YDR007W RGP1P16664 663 aa7.91□□□□□ -1.14
TRP1YDR007W APM2P38700 605 aa7.91□□□□□ -1.14
TRP1YDR007W PIC2P40035 300 aa7.91□□□□□ -1.14
TRP1YDR007W NUP85P46673 744 aa7.91□□□□□ -1.14
TRP1YDR007W YJR098CP47139 656 aa7.91□□□□□ -1.14
TRP1YDR007W YJR115WP47152 169 aa7.91□□□□□ -1.14
TRP1YDR007W ITC1P53125 1264 aa7.91□□□□□ -1.14
TRP1YDR007W PRI2P20457 528 aa7.9□□□□□ -1.14
TRP1YDR007W YGR053CP53234 283 aa7.9□□□□□ -1.14
TRP1YDR007W PMT7Q06644 662 aa7.9□□□□□ -1.14
TRP1YDR007W BDF2Q07442 638 aa7.9□□□□□ -1.14
TRP1YDR007W RTT10Q08924 1013 aa7.9□□□□□ -1.14
TRP1YDR007W GCR1P07261 785 aa7.89□□□□□ -1.15
TRP1YDR007W DUR3P33413 735 aa7.89□□□□□ -1.15
TRP1YDR007W SQT1P35184 431 aa7.89□□□□□ -1.15
TRP1YDR007W OPI10Q08202 246 aa7.89□□□□□ -1.15
TRP1YDR007W DUT1P33317 147 aa7.88□□□□□ -1.15
TRP1YDR007W RRP14P36080 434 aaKnown RBP7.88□□□□□ -1.15
TRP1YDR007W RSM26P47141 266 aa7.88□□□□□ -1.15
TRP1YDR007W UBP15P50101 1230 aa7.88□□□□□ -1.15
TRP1YDR007W TDA5Q06417 326 aaKnown RBP7.88□□□□□ -1.15
TRP1YDR007W PBP2P38151 413 aaKnown RBP RIP-Chip data7.87□□□□□ -1.15not detected
TRP1YDR007W SAP155P43612 1002 aa7.87□□□□□ -1.15
TRP1YDR007W ALG12P53730 551 aa7.87□□□□□ -1.15
TRP1YDR007W YNR040WP53736 256 aa7.87□□□□□ -1.15
TRP1YDR007W TMA46Q12000 345 aaKnown RBP7.87□□□□□ -1.15
TRP1YDR007W RAD27P26793 382 aa7.86□□□□□ -1.15
TRP1YDR007W NCL1P38205 684 aaKnown RBP7.86□□□□□ -1.15
TRP1YDR007W BUD6P41697 788 aa7.86□□□□□ -1.15
TRP1YDR007W HUL5P53119 910 aa7.86□□□□□ -1.15
TRP1YDR007W FAR11P53917 953 aa7.86□□□□□ -1.15
TRP1YDR007W NAN1Q02931 896 aaKnown RBP7.86□□□□□ -1.15
TRP1YDR007W MRL1Q06815 381 aa7.86□□□□□ -1.15
TRP1YDR007W FAL1Q12099 399 aaKnown RBP7.86□□□□□ -1.15
TRP1YDR007W TCB1Q12466 1186 aa7.86□□□□□ -1.15
TRP1YDR007W RAD4P14736 754 aa7.85□□□□□ -1.15
TRP1YDR007W FPR3P38911 411 aaKnown RBP7.85□□□□□ -1.15
TRP1YDR007W TAT2P38967 592 aa7.85□□□□□ -1.15
TRP1YDR007W SPF1P39986 1215 aaKnown RBP7.85□□□□□ -1.15
TRP1YDR007W XKS1P42826 600 aa7.85□□□□□ -1.15
TRP1YDR007W UBP3Q01477 912 aaKnown RBP RIP-Chip data7.85□□□□□ -1.15not detected
TRP1YDR007W MRPL16P38064 232 aa7.84□□□□□ -1.15
TRP1YDR007W DPS1P04802 557 aaKnown RBP7.83□□□□□ -1.16
TRP1YDR007W RPP1AP05318 106 aaPredicted RBP7.83□□□□□ -1.16
TRP1YDR007W RIM11P38615 370 aa7.83□□□□□ -1.16
TRP1YDR007W PEX28P38848 579 aa7.83□□□□□ -1.16
TRP1YDR007W TIM54P47045 478 aa7.83□□□□□ -1.16
TRP1YDR007W PEX13P80667 386 aa7.83□□□□□ -1.16
TRP1YDR007W RSC2Q06488 889 aa7.83□□□□□ -1.16
TRP1YDR007W PPT1P53043 513 aa7.82□□□□□ -1.16
TRP1YDR007W UBP2Q01476 1272 aa7.82□□□□□ -1.16
TRP1YDR007W CCP1P00431 361 aa7.81□□□□□ -1.16
TRP1YDR007W BAS1P22035 811 aa7.81□□□□□ -1.16
TRP1YDR007W NPR1P22211 790 aa7.81□□□□□ -1.16
TRP1YDR007W YKL069WP36088 180 aa7.81□□□□□ -1.16
TRP1YDR007W YER156CP40093 338 aaKnown RBP7.81□□□□□ -1.16
TRP1YDR007W NOG1Q02892 647 aaKnown RBP7.81□□□□□ -1.16
TRP1YDR007W CMR1Q12510 522 aaKnown RBP7.81□□□□□ -1.16
TRP1YDR007W TAF13P11747 167 aa7.8□□□□□ -1.16
TRP1YDR007W PRP5P21372 849 aaPredicted RBP7.8□□□□□ -1.16
TRP1YDR007W SHU2P38957 223 aa7.8□□□□□ -1.16
TRP1YDR007W KRI1P42846 591 aaKnown RBP7.8□□□□□ -1.16
TRP1YDR007W YGL140CP53120 1219 aa7.8□□□□□ -1.16
TRP1YDR007W TYW3P53177 273 aa7.8□□□□□ -1.16
TRP1YDR007W KRE33P53914 1056 aaKnown RBP7.8□□□□□ -1.16
TRP1YDR007W EEB1Q02891 456 aa7.8□□□□□ -1.16
TRP1YDR007W CDC19P00549 500 aaKnown RBP7.78□□□□□ -1.16
TRP1YDR007W MET6P05694 767 aaKnown RBP7.78□□□□□ -1.16
TRP1YDR007W FUS1P11710 512 aa7.78□□□□□ -1.16
TRP1YDR007W SEC23P15303 768 aaKnown RBP7.78□□□□□ -1.16
TRP1YDR007W MSH3P25336 1018 aa7.78□□□□□ -1.16
TRP1YDR007W NUP82P40368 713 aa7.78□□□□□ -1.16
TRP1YDR007W YLR346CQ06139 101 aa7.78□□□□□ -1.16
TRP1YDR007W HDA2Q06629 674 aa7.78□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms