RNA–Protein interactions for RNA: YDL212W

SHR3, Transcript of Endoplasmic reticulum packaging chaperone, yeastyeast

Gene SHR3, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR3YDL212W YCK2P23292 546 aaKnown RBP7.22□□□□□ -1.25
SHR3YDL212W DUR3P33413 735 aa7.22□□□□□ -1.25
SHR3YDL212W AMN1P38285 549 aaPredicted RBP7.22□□□□□ -1.25
SHR3YDL212W SOK2P53438 785 aaPredicted RBP7.22□□□□□ -1.25
SHR3YDL212W YDR215CQ12240 137 aa7.22□□□□□ -1.25
SHR3YDL212W WHI5Q12416 295 aa7.22□□□□□ -1.25
SHR3YDL212W STM1P39015 273 aaKnown RBP7.21□□□□□ -1.26
SHR3YDL212W TED1P40533 473 aa7.21□□□□□ -1.26
SHR3YDL212W SOG2Q08817 791 aa7.21□□□□□ -1.26
SHR3YDL212W PUS1Q12211 544 aaKnown RBP7.21□□□□□ -1.26
SHR3YDL212W YPR053CQ6Q5F3 151 aa7.21□□□□□ -1.26
SHR3YDL212W SLN1P39928 1220 aaPredicted RBP7.2□□□□□ -1.26
SHR3YDL212W GIP2P40036 548 aa7.2□□□□□ -1.26
SHR3YDL212W BSC2Q05611 235 aa7.2□□□□□ -1.26
SHR3YDL212W MSC6Q08818 692 aaKnown RBP7.2□□□□□ -1.26
SHR3YDL212W GLO4Q12320 285 aa7.2□□□□□ -1.26
SHR3YDL212W HVG1P0CE11 249 aa7.19□□□□□ -1.26
SHR3YDL212W PPX1P38698 397 aa7.19□□□□□ -1.26
SHR3YDL212W IPL1P38991 367 aa7.19□□□□□ -1.26
SHR3YDL212W PRY1P47032 299 aa7.19□□□□□ -1.26
SHR3YDL212W GAS5Q08193 484 aa7.19□□□□□ -1.26
SHR3YDL212W NOP8Q08287 484 aaPredicted RBP7.19□□□□□ -1.26
SHR3YDL212W MET4P32389 672 aa7.18□□□□□ -1.26
SHR3YDL212W YMR187CQ03236 431 aa7.18□□□□□ -1.26
SHR3YDL212W SLP1Q12232 587 aa7.18□□□□□ -1.26
SHR3YDL212W RRM3P38766 723 aa7.17□□□□□ -1.26
SHR3YDL212W SKN7P38889 622 aa7.17□□□□□ -1.26
SHR3YDL212W LSB6P42951 607 aa7.17□□□□□ -1.26
SHR3YDL212W YJR124CP47159 448 aa7.17□□□□□ -1.26
SHR3YDL212W BUD9P53226 547 aa7.17□□□□□ -1.26
SHR3YDL212W YNR065CP53751 1116 aa7.17□□□□□ -1.26
SHR3YDL212W TY4B-PA0A0B7P3V8 1104 aa7.16□□□□□ -1.26
SHR3YDL212W FLP1P03870 423 aa7.16□□□□□ -1.26
SHR3YDL212W YHL008CP38750 627 aa7.16□□□□□ -1.26
SHR3YDL212W TY4A-HQ6Q5P6 413 aa7.16□□□□□ -1.26
SHR3YDL212W RIM11P38615 370 aa7.15□□□□□ -1.26
SHR3YDL212W PAN5P38787 379 aa7.15□□□□□ -1.26
SHR3YDL212W GUP1P53154 560 aa7.15□□□□□ -1.26
SHR3YDL212W MSH6Q03834 1242 aa7.15□□□□□ -1.26
SHR3YDL212W INP54Q08227 384 aaKnown RBP7.15□□□□□ -1.26
SHR3YDL212W CMR1Q12510 522 aaKnown RBP7.15□□□□□ -1.26
SHR3YDL212W PHO4P07270 312 aaKnown RBP7.14□□□□□ -1.27
SHR3YDL212W HAS1Q03532 505 aaKnown RBP7.14□□□□□ -1.27
SHR3YDL212W MCA1Q08601 432 aa7.13□□□□□ -1.27
SHR3YDL212W NEO1P40527 1151 aa7.12□□□□□ -1.27
SHR3YDL212W CCT8P47079 568 aaKnown RBP7.12□□□□□ -1.27
SHR3YDL212W TOS4Q06266 489 aa7.12□□□□□ -1.27
SHR3YDL212W NOC3Q07896 663 aaPredicted RBP7.12□□□□□ -1.27
SHR3YDL212W NPR1P22211 790 aa7.11□□□□□ -1.27
SHR3YDL212W SEC20P28791 383 aa7.11□□□□□ -1.27
SHR3YDL212W POL5P39985 1022 aaKnown RBP7.11□□□□□ -1.27
SHR3YDL212W FET4P40988 552 aa7.11□□□□□ -1.27
SHR3YDL212W THI12P42883 340 aa7.11□□□□□ -1.27
SHR3YDL212W THI5P43534 340 aa7.11□□□□□ -1.27
SHR3YDL212W THI11P47183 340 aa7.11□□□□□ -1.27
SHR3YDL212W NUT1P53114 1132 aa7.11□□□□□ -1.27
SHR3YDL212W MTC5Q03897 1148 aa7.11□□□□□ -1.27
SHR3YDL212W THI13Q07748 340 aa7.11□□□□□ -1.27
SHR3YDL212W AI3P03877 415 aa7.1□□□□□ -1.27
SHR3YDL212W ECM2P38241 364 aaKnown RBP7.1□□□□□ -1.27
SHR3YDL212W LSB3P43603 459 aaKnown RBP7.1□□□□□ -1.27
SHR3YDL212W SAP155P43612 1002 aa7.1□□□□□ -1.27
SHR3YDL212W SAM37P50110 327 aa7.1□□□□□ -1.27
SHR3YDL212W PRP5P21372 849 aaPredicted RBP7.09□□□□□ -1.27
SHR3YDL212W LEM3P42838 414 aa7.09□□□□□ -1.27
SHR3YDL212W DAK2P43550 591 aa7.09□□□□□ -1.27
SHR3YDL212W MON1P53129 644 aa7.09□□□□□ -1.27
SHR3YDL212W TY1A-NL1Q12391 440 aaKnown RBP7.09□□□□□ -1.27
SHR3YDL212W SAC7P17121 654 aa7.08□□□□□ -1.28
SHR3YDL212W CIC1P38779 376 aaKnown RBP7.08□□□□□ -1.28
SHR3YDL212W ERS1P17261 260 aa7.07□□□□□ -1.28
SHR3YDL212W SFA1P32771 386 aa7.07□□□□□ -1.28
SHR3YDL212W SLD2P34252 453 aa7.07□□□□□ -1.28
SHR3YDL212W TAT1P38085 619 aa7.07□□□□□ -1.28
SHR3YDL212W SPO71Q03868 1245 aa7.07□□□□□ -1.28
SHR3YDL212W UGA4P32837 571 aa7.06□□□□□ -1.28
SHR3YDL212W YAF9P53930 226 aa7.06□□□□□ -1.28
SHR3YDL212W ELG1Q12050 791 aa7.06□□□□□ -1.28
SHR3YDL212W HTS1P07263 546 aaKnown RBP7.05□□□□□ -1.28
SHR3YDL212W VPS35P34110 944 aa7.05□□□□□ -1.28
SHR3YDL212W DSE4P53753 1117 aa7.05□□□□□ -1.28
SHR3YDL212W YCS4Q06156 1176 aa7.05□□□□□ -1.28
SHR3YDL212W PMT7Q06644 662 aa7.05□□□□□ -1.28
SHR3YDL212W GCD6P32501 712 aaKnown RBP7.04□□□□□ -1.28
SHR3YDL212W ATE1P16639 503 aa7.03□□□□□ -1.28
SHR3YDL212W PRP40P33203 583 aaKnown RBP7.03□□□□□ -1.28
SHR3YDL212W RPT1P33299 467 aaKnown RBP7.03□□□□□ -1.28
SHR3YDL212W ARI1P53111 347 aaKnown RBP7.03□□□□□ -1.28
SHR3YDL212W RRP15Q06511 250 aaPredicted RBP7.03□□□□□ -1.28
SHR3YDL212W TY1A-LR4P0C2I8 440 aaKnown RBP7.02□□□□□ -1.29
SHR3YDL212W TY1A-DR6P0CX70 440 aa7.02□□□□□ -1.29
SHR3YDL212W TY1A-ER1P0CX71 440 aa7.02□□□□□ -1.29
SHR3YDL212W TY1A-LR2P0CX72 440 aa7.02□□□□□ -1.29
SHR3YDL212W TY1A-PLP0CX73 440 aa7.02□□□□□ -1.29
SHR3YDL212W TY1A-JR1P0CX74 440 aa7.02□□□□□ -1.29
SHR3YDL212W TY1A-LR3P0CX75 440 aa7.02□□□□□ -1.29
SHR3YDL212W TY1A-ML2P0CX76 440 aa7.02□□□□□ -1.29
SHR3YDL212W MCM5P29496 775 aaKnown RBP7.02□□□□□ -1.29
SHR3YDL212W MAE1P36013 669 aaKnown RBP7.02□□□□□ -1.29
SHR3YDL212W YPL034WQ03083 165 aa7.02□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 90.6 ms