RNA–Protein interactions for RNA: YDL150W

RPC53, Transcript of RNA polymerase III subunit C53, yeast

Gene RPC53, Length 1,269 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPC53	YDL150W	ARI1	P53111	347 aa	Known RBP	7.37	□□□□□ -1.23
RPC53	YDL150W	RPB10	P22139	70 aa		7.36	□□□□□ -1.23
RPC53	YDL150W	AIM46	P38885	310 aa		7.36	□□□□□ -1.23
RPC53	YDL150W	GIP2	P40036	548 aa		7.36	□□□□□ -1.23
RPC53	YDL150W	INP51	P40559	946 aa	Known RBP	7.36	□□□□□ -1.23
RPC53	YDL150W	GAS5	Q08193	484 aa		7.36	□□□□□ -1.23
RPC53	YDL150W	SOG2	Q08817	791 aa		7.36	□□□□□ -1.23
RPC53	YDL150W	SUT1	P53032	299 aa	Known RBP	7.35	□□□□□ -1.23
RPC53	YDL150W	BIO5	P53744	561 aa	Known RBP	7.35	□□□□□ -1.23
RPC53	YDL150W	ALD3	P54114	506 aa		7.35	□□□□□ -1.23
RPC53	YDL150W	FUR4	P05316	633 aa	Known RBP	7.34	□□□□□ -1.23
RPC53	YDL150W	SMC1	P32908	1225 aa		7.34	□□□□□ -1.23
RPC53	YDL150W	TED1	P40533	473 aa		7.34	□□□□□ -1.23
RPC53	YDL150W	GUP1	P53154	560 aa		7.34	□□□□□ -1.23
RPC53	YDL150W	SOK2	P53438	785 aa	Predicted RBP	7.34	□□□□□ -1.23
RPC53	YDL150W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	7.34	□□□□□ -1.23	not detected
RPC53	YDL150W	SKI3	P17883	1432 aa	Known RBP	7.34	□□□□□ -1.23
RPC53	YDL150W	YCF1	P39109	1515 aa	Known RBP	7.33	□□□□□ -1.24
RPC53	YDL150W	FUS1	P11710	512 aa		7.33	□□□□□ -1.24
RPC53	YDL150W	TFA2	P36145	328 aa		7.33	□□□□□ -1.24
RPC53	YDL150W	LEM3	P42838	414 aa		7.33	□□□□□ -1.24
RPC53	YDL150W	YJL181W	P46987	611 aa		7.33	□□□□□ -1.24
RPC53	YDL150W	TIF6	Q12522	245 aa	Known RBP	7.33	□□□□□ -1.24
RPC53	YDL150W	SSN2	P38931	1420 aa		7.33	□□□□□ -1.24
RPC53	YDL150W	IRS4	P36115	615 aa	Known RBP	7.32	□□□□□ -1.24
RPC53	YDL150W	RAD55	P38953	406 aa		7.32	□□□□□ -1.24
RPC53	YDL150W	TY1A-NL1	Q12391	440 aa	Known RBP	7.32	□□□□□ -1.24
RPC53	YDL150W	TAF2	P23255	1407 aa		7.3	□□□□□ -1.24
RPC53	YDL150W	PSY2	P40164	858 aa		7.3	□□□□□ -1.24
RPC53	YDL150W	DSE4	P53753	1117 aa		7.3	□□□□□ -1.24
RPC53	YDL150W	HVG1	P0CE11	249 aa		7.29	□□□□□ -1.24
RPC53	YDL150W	RSC6	P25632	483 aa		7.29	□□□□□ -1.24
RPC53	YDL150W	SSK2	P53599	1579 aa		7.29	□□□□□ -1.24
RPC53	YDL150W	SSA1	P10591	642 aa	Known RBP	7.28	□□□□□ -1.24
RPC53	YDL150W	PAN5	P38787	379 aa		7.28	□□□□□ -1.24
RPC53	YDL150W	POL5	P39985	1022 aa	Known RBP	7.26	□□□□□ -1.25
RPC53	YDL150W	ATG1	P53104	897 aa		7.26	□□□□□ -1.25
RPC53	YDL150W	RPL34A	P87262	121 aa	Predicted RBP	7.26	□□□□□ -1.25
RPC53	YDL150W	GLO4	Q12320	285 aa		7.26	□□□□□ -1.25
RPC53	YDL150W	KAR5	Q04746	504 aa		7.25	□□□□□ -1.25
RPC53	YDL150W	SIN3	P22579	1536 aa		7.24	□□□□□ -1.25
RPC53	YDL150W	PYC2	P32327	1180 aa	Known RBP	7.24	□□□□□ -1.25
RPC53	YDL150W	UFD2	P54860	961 aa		7.24	□□□□□ -1.25
RPC53	YDL150W	RSC4	Q02206	625 aa		7.24	□□□□□ -1.25
RPC53	YDL150W	REC8	Q12188	680 aa		7.24	□□□□□ -1.25
RPC53	YDL150W	ACF4	P47129	309 aa		7.23	□□□□□ -1.25
RPC53	YDL150W	YJR124C	P47159	448 aa		7.23	□□□□□ -1.25
RPC53	YDL150W	INP52	P50942	1183 aa		7.23	□□□□□ -1.25
RPC53	YDL150W	YNR065C	P53751	1116 aa		7.23	□□□□□ -1.25
RPC53	YDL150W	SPO71	Q03868	1245 aa		7.23	□□□□□ -1.25
RPC53	YDL150W	YLR122C	Q12312	125 aa		7.23	□□□□□ -1.25
RPC53	YDL150W	COQ2	P32378	372 aa		7.22	□□□□□ -1.25
RPC53	YDL150W	GEF1	P37020	779 aa		7.22	□□□□□ -1.25
RPC53	YDL150W	SAF1	P38352	637 aa		7.22	□□□□□ -1.25
RPC53	YDL150W	GLO3	P38682	493 aa	Known RBP	7.22	□□□□□ -1.25
RPC53	YDL150W	QDR1	P40475	563 aa		7.22	□□□□□ -1.25
RPC53	YDL150W	CTR9	P89105	1077 aa		7.22	□□□□□ -1.25
RPC53	YDL150W	HAS1	Q03532	505 aa	Known RBP	7.21	□□□□□ -1.26
RPC53	YDL150W	UFD4	P33202	1483 aa		7.21	□□□□□ -1.26
RPC53	YDL150W	MAE1	P36013	669 aa	Known RBP	7.2	□□□□□ -1.26
RPC53	YDL150W	KAE1	P36132	386 aa		7.2	□□□□□ -1.26
RPC53	YDL150W	NCE103	P53615	221 aa		7.2	□□□□□ -1.26
RPC53	YDL150W	ALO1	P54783	526 aa	Known RBP	7.2	□□□□□ -1.26
RPC53	YDL150W	ELG1	Q12050	791 aa		7.2	□□□□□ -1.26
RPC53	YDL150W	TRL1	P09880	827 aa	Known RBP	7.19	□□□□□ -1.26
RPC53	YDL150W	COB	P00163	385 aa		7.18	□□□□□ -1.26
RPC53	YDL150W	MAC1	P35192	417 aa		7.18	□□□□□ -1.26
RPC53	YDL150W	NEO1	P40527	1151 aa		7.18	□□□□□ -1.26
RPC53	YDL150W	FET4	P40988	552 aa		7.18	□□□□□ -1.26
RPC53	YDL150W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	7.18	□□□□□ -1.26	not detected
RPC53	YDL150W	MNL2	Q12205	849 aa		7.18	□□□□□ -1.26
RPC53	YDL150W	MET5	P47169	1442 aa		7.18	□□□□□ -1.26
RPC53	YDL150W	OMA1	P36163	345 aa		7.17	□□□□□ -1.26
RPC53	YDL150W	TRS120	Q04183	1289 aa		7.17	□□□□□ -1.26
RPC53	YDL150W	MED7	Q08278	222 aa		7.17	□□□□□ -1.26
RPC53	YDL150W	TRP3	P00937	484 aa		7.16	□□□□□ -1.26
RPC53	YDL150W	CDC3	P32457	520 aa	Known RBP	7.16	□□□□□ -1.26
RPC53	YDL150W	YKR073C	P36153	106 aa		7.16	□□□□□ -1.26
RPC53	YDL150W	RIM11	P38615	370 aa		7.16	□□□□□ -1.26
RPC53	YDL150W	PRP5	P21372	849 aa	Predicted RBP	7.15	□□□□□ -1.26
RPC53	YDL150W	MSH6	Q03834	1242 aa		7.15	□□□□□ -1.26
RPC53	YDL150W	LTE1	P07866	1435 aa		7.14	□□□□□ -1.27
RPC53	YDL150W	CHS2	P14180	963 aa		7.14	□□□□□ -1.27
RPC53	YDL150W	ERS1	P17261	260 aa		7.14	□□□□□ -1.27
RPC53	YDL150W	NAM7	P30771	971 aa	Known RBP	7.14	□□□□□ -1.27
RPC53	YDL150W	AKR1	P39010	764 aa		7.14	□□□□□ -1.27
RPC53	YDL150W	YNL011C	P53980	444 aa		7.14	□□□□□ -1.27
RPC53	YDL150W	ESP1	Q03018	1630 aa		7.13	□□□□□ -1.27
RPC53	YDL150W	MYO2	P19524	1574 aa	Known RBP	7.13	□□□□□ -1.27
RPC53	YDL150W	DUR3	P33413	735 aa		7.13	□□□□□ -1.27
RPC53	YDL150W	FAR11	P53917	953 aa		7.13	□□□□□ -1.27
RPC53	YDL150W	CMR1	Q12510	522 aa	Known RBP	7.13	□□□□□ -1.27
RPC53	YDL150W	CHD1	P32657	1468 aa		7.12	□□□□□ -1.27
RPC53	YDL150W	SAP155	P43612	1002 aa		7.12	□□□□□ -1.27
RPC53	YDL150W	CDC55	Q00362	526 aa		7.12	□□□□□ -1.27
RPC53	YDL150W	NPR1	P22211	790 aa		7.11	□□□□□ -1.27
RPC53	YDL150W	MDJ2	P42834	146 aa		7.11	□□□□□ -1.27
RPC53	YDL150W	SPO74	P45819	413 aa		7.11	□□□□□ -1.27
RPC53	YDL150W	KIP3	P53086	805 aa	Known RBP	7.11	□□□□□ -1.27
RPC53	YDL150W	YIG1	Q08956	461 aa		7.11	□□□□□ -1.27

Retrieved 100 of 5,963 RNA–protein pairs in 60.2 ms