RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C YMR187CQ03236 431 aa1.25□□□□□ -2.21
VAM6YDL077C STE20Q03497 939 aaKnown RBP1.25□□□□□ -2.21
VAM6YDL077C NAB6Q03735 1134 aaKnown RBP RIP-Chip data1.25□□□□□ -2.21not detected
VAM6YDL077C IML1P47170 1584 aa1.25□□□□□ -2.21
VAM6YDL077C PSK1P31374 1356 aa1.25□□□□□ -2.21
VAM6YDL077C TY4B-PA0A0B7P3V8 1104 aa1.25□□□□□ -2.21
VAM6YDL077C PCT1P13259 424 aa1.25□□□□□ -2.21
VAM6YDL077C RAD51P25454 400 aa1.25□□□□□ -2.21
VAM6YDL077C MSH1P25846 959 aa1.25□□□□□ -2.21
VAM6YDL077C SIC1P38634 284 aa1.25□□□□□ -2.21
VAM6YDL077C BRL1P38770 471 aa1.25□□□□□ -2.21
VAM6YDL077C HOS4P40480 1083 aa1.25□□□□□ -2.21
VAM6YDL077C VTC4P47075 721 aa1.25□□□□□ -2.21
VAM6YDL077C YNL247WP53852 767 aaKnown RBP1.25□□□□□ -2.21
VAM6YDL077C CUZ1P53899 274 aa1.25□□□□□ -2.21
VAM6YDL077C ALD3P54114 506 aa1.25□□□□□ -2.21
VAM6YDL077C BPT1P14772 1559 aa1.25□□□□□ -2.21
VAM6YDL077C SWI1P09547 1314 aa1.25□□□□□ -2.21
VAM6YDL077C BNR1P40450 1375 aa1.25□□□□□ -2.21
VAM6YDL077C DNF3Q12674 1656 aa1.25□□□□□ -2.21
VAM6YDL077C SNT2P53127 1403 aa1.25□□□□□ -2.21
VAM6YDL077C STE11P23561 717 aa1.24□□□□□ -2.21
VAM6YDL077C MRC1P25588 1096 aa1.24□□□□□ -2.21
VAM6YDL077C RAD16P31244 790 aa1.24□□□□□ -2.21
VAM6YDL077C GUT2P32191 649 aa1.24□□□□□ -2.21
VAM6YDL077C RRP1P35178 278 aaPredicted RBP1.24□□□□□ -2.21
VAM6YDL077C RPC37P36121 282 aa1.24□□□□□ -2.21
VAM6YDL077C AHP1P38013 176 aaKnown RBP1.24□□□□□ -2.21
VAM6YDL077C ARL1P38116 183 aaKnown RBP1.24□□□□□ -2.21
VAM6YDL077C TAF5P38129 798 aa1.24□□□□□ -2.21
VAM6YDL077C ISW1P38144 1129 aa1.24□□□□□ -2.21
VAM6YDL077C BDH2P39713 417 aa1.24□□□□□ -2.21
VAM6YDL077C SEC26P41810 973 aaKnown RBP1.24□□□□□ -2.21
VAM6YDL077C FIG4P42837 879 aa1.24□□□□□ -2.21
VAM6YDL077C CWC22P53333 577 aaKnown RBP1.24□□□□□ -2.21
VAM6YDL077C DSL1P53847 754 aa1.24□□□□□ -2.21
VAM6YDL077C NAM8Q00539 523 aaKnown RBP1.24□□□□□ -2.21
VAM6YDL077C HOS3Q02959 697 aaKnown RBP1.24□□□□□ -2.21
VAM6YDL077C YML119WQ03208 357 aa1.24□□□□□ -2.21
VAM6YDL077C RRB1Q04225 511 aaKnown RBP1.24□□□□□ -2.21
VAM6YDL077C ORM2Q06144 216 aa1.24□□□□□ -2.21
VAM6YDL077C GGA1Q06336 557 aa1.24□□□□□ -2.21
VAM6YDL077C NDL1Q06568 189 aa1.24□□□□□ -2.21
VAM6YDL077C ETT1Q08421 412 aaKnown RBP1.24□□□□□ -2.21
VAM6YDL077C NOP56Q12460 504 aaKnown RBP RIP-Chip data1.24□□□□□ -2.21not detected
VAM6YDL077C USO1P25386 1790 aa1.24□□□□□ -2.21
VAM6YDL077C DNF1P32660 1571 aa1.24□□□□□ -2.21
VAM6YDL077C CLN1P20437 546 aa1.24□□□□□ -2.21
VAM6YDL077C MRPS28P21771 286 aa1.24□□□□□ -2.21
VAM6YDL077C MSM1P22438 575 aa1.24□□□□□ -2.21
VAM6YDL077C PSO2P30620 661 aa1.24□□□□□ -2.21
VAM6YDL077C RSC8P43609 557 aaKnown RBP1.24□□□□□ -2.21
VAM6YDL077C LSC1P53598 329 aaKnown RBP1.24□□□□□ -2.21
VAM6YDL077C KRE33P53914 1056 aaKnown RBP1.24□□□□□ -2.21
VAM6YDL077C LCD1Q04377 747 aa1.24□□□□□ -2.21
VAM6YDL077C NOC3Q07896 663 aaPredicted RBP1.24□□□□□ -2.21
VAM6YDL077C ENT1Q12518 454 aa1.24□□□□□ -2.21
VAM6YDL077C NHA1Q99271 985 aa1.24□□□□□ -2.21
VAM6YDL077C SAC3P46674 1301 aa1.24□□□□□ -2.21
VAM6YDL077C VPS15P22219 1454 aa1.24□□□□□ -2.21
VAM6YDL077C YOR093CQ12275 1648 aa1.24□□□□□ -2.21
VAM6YDL077C TY1B-DR3Q99231 1755 aa1.24□□□□□ -2.21
VAM6YDL077C TOM70P07213 617 aaKnown RBP1.24□□□□□ -2.21
VAM6YDL077C ASF1P32447 279 aa1.24□□□□□ -2.21
VAM6YDL077C SSO1P32867 290 aa1.24□□□□□ -2.21
VAM6YDL077C TBS1P38114 1094 aa1.24□□□□□ -2.21
VAM6YDL077C EXO84P38261 753 aa1.24□□□□□ -2.21
VAM6YDL077C DSN1P40568 576 aa1.24□□□□□ -2.21
VAM6YDL077C LAM5P43560 674 aa1.24□□□□□ -2.21
VAM6YDL077C UBP15P50101 1230 aa1.24□□□□□ -2.21
VAM6YDL077C ASI1P54074 624 aa1.24□□□□□ -2.21
VAM6YDL077C TDA6Q06466 467 aa1.24□□□□□ -2.21
VAM6YDL077C ATG20Q07528 640 aa1.24□□□□□ -2.21
VAM6YDL077C CFT1Q06632 1357 aaKnown RBP1.24□□□□□ -2.21
VAM6YDL077C UTP10P42945 1769 aaKnown RBP1.23□□□□□ -2.21
VAM6YDL077C MLP1Q02455 1875 aaKnown RBP1.23□□□□□ -2.21
VAM6YDL077C STE6P12866 1290 aa1.23□□□□□ -2.21
VAM6YDL077C DAT1P13483 248 aaKnown RBP1.23□□□□□ -2.21
VAM6YDL077C ELM1P32801 640 aa1.23□□□□□ -2.21
VAM6YDL077C MET1P36150 593 aa1.23□□□□□ -2.21
VAM6YDL077C MED8P38304 223 aa1.23□□□□□ -2.21
VAM6YDL077C RTT107P38850 1070 aa1.23□□□□□ -2.21
VAM6YDL077C LIN1P38852 340 aaPredicted RBP1.23□□□□□ -2.21
VAM6YDL077C ARB1P40024 610 aaKnown RBP1.23□□□□□ -2.21
VAM6YDL077C YFL066CP43538 392 aa1.23□□□□□ -2.21
VAM6YDL077C KEL2P50090 882 aa1.23□□□□□ -2.21
VAM6YDL077C MAL13P53338 473 aa1.23□□□□□ -2.21
VAM6YDL077C YLL054CQ12244 843 aa1.23□□□□□ -2.21
VAM6YDL077C GLE1Q12315 538 aa1.23□□□□□ -2.21
VAM6YDL077C MDS3P53094 1487 aa1.23□□□□□ -2.21
VAM6YDL077C VPS1P21576 704 aaKnown RBP1.23□□□□□ -2.21
VAM6YDL077C DIT1P21623 536 aa1.23□□□□□ -2.21
VAM6YDL077C UBP1P25037 809 aa1.23□□□□□ -2.21
VAM6YDL077C POL4P25615 582 aa1.23□□□□□ -2.21
VAM6YDL077C KNS1P32350 737 aaPredicted RBP1.23□□□□□ -2.21
VAM6YDL077C DAL1P32375 460 aa1.23□□□□□ -2.21
VAM6YDL077C GLC3P32775 704 aa1.23□□□□□ -2.21
VAM6YDL077C MAC1P35192 417 aa1.23□□□□□ -2.21
VAM6YDL077C SKI2P35207 1287 aaKnown RBP RIP-Chip data1.23□□□□□ -2.21not detected
VAM6YDL077C MRP8P35719 219 aa1.23□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 72 ms