RNA–Protein interactions for RNA: YCR045C

RRT12, Transcript of Probable subtilisin-family protease, yeast

Gene RRT12, Length 1,476 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRT12	YCR045C	NPL4	P33755	580 aa		13.28	□□□□□ -0.28
RRT12	YCR045C	MNR2	P35724	969 aa		13.28	□□□□□ -0.28
RRT12	YCR045C	NUG1	P40010	520 aa	Known RBP	13.28	□□□□□ -0.28
RRT12	YCR045C	YIR042C	P40586	236 aa		13.28	□□□□□ -0.28
RRT12	YCR045C	IOC3	P43596	787 aa		13.28	□□□□□ -0.28
RRT12	YCR045C	RAT1	Q02792	1006 aa	Known RBP	13.28	□□□□□ -0.28
RRT12	YCR045C	CTI6	Q08923	506 aa		13.28	□□□□□ -0.28
RRT12	YCR045C	DCS2	Q12123	353 aa		13.28	□□□□□ -0.28
RRT12	YCR045C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	13.27	□□□□□ -0.29	not detected
RRT12	YCR045C	RPN10	P38886	268 aa	Known RBP	13.27	□□□□□ -0.29
RRT12	YCR045C	TPM2	P40414	161 aa		13.27	□□□□□ -0.29
RRT12	YCR045C	YJL181W	P46987	611 aa		13.27	□□□□□ -0.29
RRT12	YCR045C	ENP2	P48234	707 aa	Known RBP	13.27	□□□□□ -0.29
RRT12	YCR045C	WAR1	Q03631	944 aa		13.27	□□□□□ -0.29
RRT12	YCR045C	YKT6	P36015	200 aa	Known RBP	13.26	□□□□□ -0.29
RRT12	YCR045C	HDA1	P53973	706 aa		13.26	□□□□□ -0.29
RRT12	YCR045C	PTK2	P47116	818 aa	Known RBP	13.25	□□□□□ -0.29
RRT12	YCR045C	HOS3	Q02959	697 aa	Known RBP	13.25	□□□□□ -0.29
RRT12	YCR045C	DPH6	Q12429	685 aa		13.25	□□□□□ -0.29
RRT12	YCR045C	CYB2	P00175	591 aa		13.24	□□□□□ -0.29
RRT12	YCR045C	CDC6	P09119	513 aa		13.24	□□□□□ -0.29
RRT12	YCR045C	HCA4	P20448	770 aa	Known RBP	13.24	□□□□□ -0.29
RRT12	YCR045C	SWI4	P25302	1093 aa	Known RBP	13.24	□□□□□ -0.29
RRT12	YCR045C	MFT1	P33441	392 aa	Known RBP	13.24	□□□□□ -0.29
RRT12	YCR045C	SIS2	P36024	562 aa		13.24	□□□□□ -0.29
RRT12	YCR045C	SPL2	P38839	148 aa		13.24	□□□□□ -0.29
RRT12	YCR045C	RPS15	Q01855	142 aa	Known RBP	13.24	□□□□□ -0.29
RRT12	YCR045C	SYF1	Q04048	859 aa	Predicted RBP	13.24	□□□□□ -0.29
RRT12	YCR045C	ISW2	Q08773	1120 aa		13.24	□□□□□ -0.29
RRT12	YCR045C	PSY4	P38193	441 aa		13.23	□□□□□ -0.29
RRT12	YCR045C	HXK1	P04806	485 aa	Known RBP	13.23	□□□□□ -0.29
RRT12	YCR045C	VPS1	P21576	704 aa	Known RBP	13.23	□□□□□ -0.29
RRT12	YCR045C	BMH2	P34730	273 aa	Known RBP	13.23	□□□□□ -0.29
RRT12	YCR045C	NOC2	P39744	710 aa	Known RBP	13.23	□□□□□ -0.29
RRT12	YCR045C	BUG1	Q12191	341 aa		13.23	□□□□□ -0.29
RRT12	YCR045C	GEF1	P37020	779 aa		13.22	□□□□□ -0.29
RRT12	YCR045C	LEO1	P38439	464 aa		13.22	□□□□□ -0.29
RRT12	YCR045C	TFG2	P41896	400 aa	Predicted RBP	13.22	□□□□□ -0.29
RRT12	YCR045C	DIB1	Q06819	143 aa	Predicted RBP	13.22	□□□□□ -0.29
RRT12	YCR045C	RGP1	P16664	663 aa		13.21	□□□□□ -0.3
RRT12	YCR045C	URA1	P28272	314 aa	Predicted RBP	13.21	□□□□□ -0.3
RRT12	YCR045C	RPN1	P38764	993 aa	Known RBP	13.21	□□□□□ -0.3
RRT12	YCR045C	TFC6	Q06339	672 aa		13.21	□□□□□ -0.3
RRT12	YCR045C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	13.21	□□□□□ -0.3	not detected
RRT12	YCR045C	LCB1	P25045	558 aa	Known RBP	13.2	□□□□□ -0.3
RRT12	YCR045C	UFD2	P54860	961 aa		13.2	□□□□□ -0.3
RRT12	YCR045C	FIG2	P25653	1609 aa		13.19	□□□□□ -0.3
RRT12	YCR045C	RRP8	P38961	392 aa	Known RBP	13.19	□□□□□ -0.3
RRT12	YCR045C	CTH1	P47976	325 aa		13.19	□□□□□ -0.3
RRT12	YCR045C	CUE3	P53137	624 aa	Known RBP	13.19	□□□□□ -0.3
RRT12	YCR045C	UTP22	P53254	1237 aa	Predicted RBP	13.19	□□□□□ -0.3
RRT12	YCR045C	RPL22A	P05749	121 aa	Known RBP	13.18	□□□□□ -0.3
RRT12	YCR045C	MYO3	P36006	1272 aa		13.18	□□□□□ -0.3
RRT12	YCR045C	CEP3	P40969	608 aa		13.18	□□□□□ -0.3
RRT12	YCR045C	STR2	P47164	639 aa		13.18	□□□□□ -0.3
RRT12	YCR045C	RPT4	P53549	437 aa	Known RBP	13.18	□□□□□ -0.3
RRT12	YCR045C	FAR11	P53917	953 aa		13.18	□□□□□ -0.3
RRT12	YCR045C	BDF2	Q07442	638 aa		13.18	□□□□□ -0.3
RRT12	YCR045C	PMD1	P32634	1753 aa		13.18	□□□□□ -0.3
RRT12	YCR045C	ANP1	P32629	500 aa		13.17	□□□□□ -0.3
RRT12	YCR045C	RPT3	P33298	428 aa	Known RBP	13.17	□□□□□ -0.3
RRT12	YCR045C	LYS4	P49367	693 aa	Predicted RBP	13.17	□□□□□ -0.3
RRT12	YCR045C	IRC4	Q03036	179 aa		13.17	□□□□□ -0.3
RRT12	YCR045C	GET3	Q12154	354 aa	Known RBP	13.17	□□□□□ -0.3
RRT12	YCR045C	BOI1	P38041	980 aa	Known RBP	13.16	□□□□□ -0.3
RRT12	YCR045C	YHL050C	P38721	697 aa		13.16	□□□□□ -0.3
RRT12	YCR045C	RIX7	Q07844	837 aa	Known RBP	13.16	□□□□□ -0.3
RRT12	YCR045C	TMA16	Q08687	178 aa		13.16	□□□□□ -0.3
RRT12	YCR045C	KRE2	P27809	442 aa		13.16	□□□□□ -0.3
RRT12	YCR045C	FRD1	P32614	470 aa	Known RBP	13.16	□□□□□ -0.3
RRT12	YCR045C	PTK1	P36002	662 aa	Predicted RBP	13.16	□□□□□ -0.3
RRT12	YCR045C	PXL1	P36166	706 aa		13.16	□□□□□ -0.3
RRT12	YCR045C	PTC5	Q12511	572 aa		13.16	□□□□□ -0.3
RRT12	YCR045C	PCI8	P40512	444 aa		13.15	□□□□□ -0.3
RRT12	YCR045C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	13.15	□□□□□ -0.3	not detected
RRT12	YCR045C	ALD2	P47771	506 aa		13.15	□□□□□ -0.3
RRT12	YCR045C	SSA2	P10592	639 aa	Known RBP	13.14	□□□□□ -0.31
RRT12	YCR045C	CAF20	P12962	161 aa	Known RBP	13.14	□□□□□ -0.31
RRT12	YCR045C	MCM3	P24279	971 aa	Known RBP	13.14	□□□□□ -0.31
RRT12	YCR045C	RTS1	P38903	757 aa		13.14	□□□□□ -0.31
RRT12	YCR045C	MAL31	P38156	614 aa		13.13	□□□□□ -0.31
RRT12	YCR045C	RXT2	P38255	430 aa		13.13	□□□□□ -0.31
RRT12	YCR045C	APL4	Q12028	832 aa		13.13	□□□□□ -0.31
RRT12	YCR045C	SFI1	Q12369	946 aa		13.13	□□□□□ -0.31
RRT12	YCR045C	MAK31	P23059	88 aa		13.12	□□□□□ -0.31
RRT12	YCR045C	BMH1	P29311	267 aa	Known RBP	13.12	□□□□□ -0.31
RRT12	YCR045C	BDF1	P35817	686 aa		13.12	□□□□□ -0.31
RRT12	YCR045C	RPG1	P38249	964 aa	Known RBP	13.12	□□□□□ -0.31
RRT12	YCR045C	TOS1	P38288	455 aa		13.12	□□□□□ -0.31
RRT12	YCR045C	CSM2	P40465	213 aa		13.12	□□□□□ -0.31
RRT12	YCR045C	YFH7	P43591	353 aa		13.12	□□□□□ -0.31
RRT12	YCR045C	VPS75	P53853	264 aa		13.12	□□□□□ -0.31
RRT12	YCR045C	YMR074C	Q04773	145 aa		13.12	□□□□□ -0.31
RRT12	YCR045C	YOR111W	Q99210	232 aa		13.12	□□□□□ -0.31
RRT12	YCR045C	HKR1	P41809	1802 aa		13.12	□□□□□ -0.31
RRT12	YCR045C	PCH2	P38126	564 aa		13.11	□□□□□ -0.31
RRT12	YCR045C	CSC1	Q06538	782 aa		13.11	□□□□□ -0.31
RRT12	YCR045C	SNF3	P10870	884 aa		13.1	□□□□□ -0.31
RRT12	YCR045C	CDC15	P27636	974 aa		13.1	□□□□□ -0.31
RRT12	YCR045C	TCD1	P38756	429 aa		13.1	□□□□□ -0.31

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms