RNA–Protein interactions for RNA: YBL004W

UTP20, Transcript of Component of the small-subunit (SSU) processome, yeastyeast

Gene UTP20, Length 7,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UTP20YBL004W MRPL7P36519 292 aa1.21□□□□□ -2.22
UTP20YBL004W ALD5P40047 520 aaKnown RBP1.21□□□□□ -2.22
UTP20YBL004W LPD1P09624 499 aaKnown RBP1.21□□□□□ -2.22
UTP20YBL004W PCK1P10963 549 aa1.21□□□□□ -2.22
UTP20YBL004W BI4P03879 638 aa1.2□□□□□ -2.22
UTP20YBL004W CAN1P04817 590 aa1.2□□□□□ -2.22
UTP20YBL004W RCR1P38212 213 aa1.2□□□□□ -2.22
UTP20YBL004W LYS14P40971 790 aa1.2□□□□□ -2.22
UTP20YBL004W LSB3P43603 459 aaKnown RBP1.2□□□□□ -2.22
UTP20YBL004W SPO74P45819 413 aa1.2□□□□□ -2.22
UTP20YBL004W CDC53Q12018 815 aaKnown RBP1.2□□□□□ -2.22
UTP20YBL004W BUD16P39988 312 aa1.2□□□□□ -2.22
UTP20YBL004W PIN2Q12057 282 aa1.2□□□□□ -2.22
UTP20YBL004W OCT1P35999 772 aa1.2□□□□□ -2.22
UTP20YBL004W IML2P47031 731 aa1.2□□□□□ -2.22
UTP20YBL004W RIP1P08067 215 aa1.2□□□□□ -2.22
UTP20YBL004W SUT2Q12286 268 aa1.2□□□□□ -2.22
UTP20YBL004W PRE10P21242 288 aaKnown RBP RIP-Chip data1.2□□□□□ -2.22not detected
UTP20YBL004W CAF120P53836 1060 aa1.2□□□□□ -2.22
UTP20YBL004W RIX7Q07844 837 aaKnown RBP1.2□□□□□ -2.22
UTP20YBL004W CFT2Q12102 859 aaPredicted RBP1.2□□□□□ -2.22
UTP20YBL004W GIN4Q12263 1142 aa1.2□□□□□ -2.22
UTP20YBL004W GRX4P32642 244 aa1.2□□□□□ -2.22
UTP20YBL004W NSE1Q07913 336 aa1.2□□□□□ -2.22
UTP20YBL004W SWI6P09959 803 aa1.19□□□□□ -2.22
UTP20YBL004W MBR1P23493 339 aa1.19□□□□□ -2.22
UTP20YBL004W VID22Q05934 901 aa1.19□□□□□ -2.22
UTP20YBL004W SSP2Q08646 371 aa1.19□□□□□ -2.22
UTP20YBL004W RME1P32338 300 aaKnown RBP1.19□□□□□ -2.22
UTP20YBL004W NIT1P40447 199 aa1.19□□□□□ -2.22
UTP20YBL004W FUB1P25659 250 aa1.19□□□□□ -2.22
UTP20YBL004W ESL2P36168 1195 aa1.19□□□□□ -2.22
UTP20YBL004W AIM7Q12156 149 aa1.19□□□□□ -2.22
UTP20YBL004W HAT1Q12341 374 aa1.19□□□□□ -2.22
UTP20YBL004W LEU2P04173 364 aaPredicted RBP1.19□□□□□ -2.22
UTP20YBL004W MSD1P15179 658 aaKnown RBP1.19□□□□□ -2.22
UTP20YBL004W SEC8P32855 1065 aa1.19□□□□□ -2.22
UTP20YBL004W AVT3P36062 692 aa1.19□□□□□ -2.22
UTP20YBL004W LEU5P38702 357 aa1.19□□□□□ -2.22
UTP20YBL004W TRP2P00899 507 aaKnown RBP1.19□□□□□ -2.22
UTP20YBL004W SEC21P32074 935 aaKnown RBP1.19□□□□□ -2.22
UTP20YBL004W RAD55P38953 406 aa1.19□□□□□ -2.22
UTP20YBL004W YJR107WP47145 328 aa1.19□□□□□ -2.22
UTP20YBL004W TAP42Q04372 366 aa1.19□□□□□ -2.22
UTP20YBL004W RGA2Q06407 1009 aa1.19□□□□□ -2.22
UTP20YBL004W CCP1P00431 361 aa1.19□□□□□ -2.22
UTP20YBL004W MPD2Q99316 277 aa1.19□□□□□ -2.22
UTP20YBL004W KIN1P13185 1064 aa1.18□□□□□ -2.22
UTP20YBL004W NUG1P40010 520 aaKnown RBP1.18□□□□□ -2.22
UTP20YBL004W ATG1P53104 897 aa1.18□□□□□ -2.22
UTP20YBL004W CSL4P53859 292 aaPredicted RBP1.18□□□□□ -2.22
UTP20YBL004W MSB2P32334 1306 aa1.18□□□□□ -2.22
UTP20YBL004W RPS8AP0CX39 200 aaKnown RBP1.18□□□□□ -2.22
UTP20YBL004W RPS8BP0CX40 200 aaKnown RBP1.18□□□□□ -2.22
UTP20YBL004W PAF1P38351 445 aa1.18□□□□□ -2.22
UTP20YBL004W PCF11P39081 626 aaPredicted RBP1.18□□□□□ -2.22
UTP20YBL004W ADE16P54113 591 aaKnown RBP1.18□□□□□ -2.22
UTP20YBL004W SUB2Q07478 446 aaKnown RBP1.18□□□□□ -2.22
UTP20YBL004W NTH2P35172 780 aa1.18□□□□□ -2.22
UTP20YBL004W INP54Q08227 384 aaKnown RBP1.18□□□□□ -2.22
UTP20YBL004W ICL1P28240 557 aaPredicted RBP1.18□□□□□ -2.22
UTP20YBL004W MIC60P36112 540 aa1.18□□□□□ -2.22
UTP20YBL004W TPS3P38426 1054 aaKnown RBP1.18□□□□□ -2.22
UTP20YBL004W OSM1P21375 501 aaKnown RBP1.18□□□□□ -2.22
UTP20YBL004W SNU71P53207 620 aaKnown RBP1.18□□□□□ -2.22
UTP20YBL004W YML053CQ04978 212 aa1.18□□□□□ -2.22
UTP20YBL004W IKI3Q06706 1349 aaKnown RBP1.18□□□□□ -2.22
UTP20YBL004W RPL43AP0CX25 92 aaKnown RBP1.18□□□□□ -2.22
UTP20YBL004W RPL43BP0CX26 92 aa1.18□□□□□ -2.22
UTP20YBL004W TFA1P36100 482 aa1.18□□□□□ -2.22
UTP20YBL004W GPT2P36148 743 aa1.17□□□□□ -2.22
UTP20YBL004W YAP1801P38856 637 aa1.17□□□□□ -2.22
UTP20YBL004W SBE2P42223 864 aaKnown RBP1.17□□□□□ -2.22
UTP20YBL004W HOS3Q02959 697 aaKnown RBP1.17□□□□□ -2.22
UTP20YBL004W BRE1Q07457 700 aaKnown RBP1.17□□□□□ -2.22
UTP20YBL004W PIG1Q06216 648 aa1.17□□□□□ -2.22
UTP20YBL004W FLC1Q08967 793 aa1.17□□□□□ -2.22
UTP20YBL004W DNM1P54861 757 aa1.17□□□□□ -2.22
UTP20YBL004W CDC48P25694 835 aaKnown RBP1.17□□□□□ -2.22
UTP20YBL004W GEF1P37020 779 aa1.17□□□□□ -2.22
UTP20YBL004W SRC1Q03707 834 aa1.17□□□□□ -2.22
UTP20YBL004W YDJ1P25491 409 aaKnown RBP1.16□□□□□ -2.22
UTP20YBL004W RMT2Q03305 412 aa1.16□□□□□ -2.22
UTP20YBL004W RPP2BP02400 110 aaKnown RBP1.16□□□□□ -2.22
UTP20YBL004W GGA2P38817 585 aaKnown RBP1.16□□□□□ -2.22
UTP20YBL004W UBX6P47049 396 aa1.16□□□□□ -2.22
UTP20YBL004W YJR008WP47085 338 aa1.16□□□□□ -2.22
UTP20YBL004W BIR1P47134 954 aa1.16□□□□□ -2.22
UTP20YBL004W ISA1Q07821 250 aaPredicted RBP1.16□□□□□ -2.22
UTP20YBL004W CDA2Q06703 312 aa1.16□□□□□ -2.22
UTP20YBL004W APL2P36000 726 aaPredicted RBP1.16□□□□□ -2.22
UTP20YBL004W HPF1Q05164 967 aa1.16□□□□□ -2.22
UTP20YBL004W YDL129WQ07555 291 aa1.16□□□□□ -2.22
UTP20YBL004W TOM71P38825 639 aaKnown RBP1.16□□□□□ -2.22
UTP20YBL004W MOB1P40484 314 aa1.16□□□□□ -2.22
UTP20YBL004W HEF3P53978 1044 aaKnown RBP1.16□□□□□ -2.22
UTP20YBL004W SPO71Q03868 1245 aa1.16□□□□□ -2.22
UTP20YBL004W YDR338CQ05497 695 aa1.16□□□□□ -2.22
UTP20YBL004W YOR131CQ12486 218 aa1.16□□□□□ -2.22
UTP20YBL004W CDC19P00549 500 aaKnown RBP1.16□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 68.3 ms