RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W AIM46P38885 310 aa2.93□□□□□ -1.94
SNC1YAL030W FPR3P38911 411 aaKnown RBP2.93□□□□□ -1.94
SNC1YAL030W IOC3P43596 787 aa2.93□□□□□ -1.94
SNC1YAL030W SAP155P43612 1002 aa2.93□□□□□ -1.94
SNC1YAL030W ADI1Q03677 179 aa2.93□□□□□ -1.94
SNC1YAL030W DAL4Q04895 635 aa2.93□□□□□ -1.94
SNC1YAL030W WRS1Q12109 432 aaKnown RBP2.93□□□□□ -1.94
SNC1YAL030W RPP1AP05318 106 aaPredicted RBP2.92□□□□□ -1.94
SNC1YAL030W TAF13P11747 167 aa2.92□□□□□ -1.94
SNC1YAL030W PDC6P26263 563 aaKnown RBP2.92□□□□□ -1.94
SNC1YAL030W SRP40P32583 406 aaPredicted RBP2.92□□□□□ -1.94
SNC1YAL030W FAR11P53917 953 aa2.92□□□□□ -1.94
SNC1YAL030W CTR9P89105 1077 aa2.92□□□□□ -1.94
SNC1YAL030W CUS1Q02554 436 aaPredicted RBP2.92□□□□□ -1.94
SNC1YAL030W YDR444WQ04093 687 aa2.92□□□□□ -1.94
SNC1YAL030W PSH1Q12161 406 aa2.92□□□□□ -1.94
SNC1YAL030W COBP00163 385 aa2.91□□□□□ -1.94
SNC1YAL030W RGP1P16664 663 aa2.91□□□□□ -1.94
SNC1YAL030W MCM5P29496 775 aaKnown RBP2.91□□□□□ -1.94
SNC1YAL030W DUT1P33317 147 aa2.91□□□□□ -1.94
SNC1YAL030W YKL091CP33324 310 aaKnown RBP2.91□□□□□ -1.94
SNC1YAL030W TAT2P38967 592 aa2.91□□□□□ -1.94
SNC1YAL030W YER156CP40093 338 aaKnown RBP2.91□□□□□ -1.94
SNC1YAL030W YIL165CP40446 119 aa2.91□□□□□ -1.94
SNC1YAL030W KRI1P42846 591 aaKnown RBP2.91□□□□□ -1.94
SNC1YAL030W YJR098CP47139 656 aa2.91□□□□□ -1.94
SNC1YAL030W ENT3P47160 408 aa2.91□□□□□ -1.94
SNC1YAL030W MTO1P53070 669 aa2.91□□□□□ -1.94
SNC1YAL030W NUT1P53114 1132 aa2.91□□□□□ -1.94
SNC1YAL030W YGR053CP53234 283 aa2.91□□□□□ -1.94
SNC1YAL030W RNH70P53331 553 aa2.91□□□□□ -1.94
SNC1YAL030W CWC24P53769 259 aa2.91□□□□□ -1.94
SNC1YAL030W ULP1Q02724 621 aa2.91□□□□□ -1.94
SNC1YAL030W EMG1Q06287 252 aaKnown RBP2.91□□□□□ -1.94
SNC1YAL030W PMT7Q06644 662 aa2.91□□□□□ -1.94
SNC1YAL030W BDF2Q07442 638 aa2.91□□□□□ -1.94
SNC1YAL030W RTT10Q08924 1013 aa2.91□□□□□ -1.94
SNC1YAL030W TY1A-DR3Q12441 440 aa2.91□□□□□ -1.94
SNC1YAL030W CIT2P08679 460 aa2.9□□□□□ -1.95
SNC1YAL030W PYC2P32327 1180 aaKnown RBP2.9□□□□□ -1.95
SNC1YAL030W ECM2P38241 364 aaKnown RBP2.9□□□□□ -1.95
SNC1YAL030W RVS167P39743 482 aaKnown RBP2.9□□□□□ -1.95
SNC1YAL030W PIC2P40035 300 aa2.9□□□□□ -1.95
SNC1YAL030W BUD6P41697 788 aa2.9□□□□□ -1.95
SNC1YAL030W NUP85P46673 744 aa2.9□□□□□ -1.95
SNC1YAL030W PTK2P47116 818 aaKnown RBP2.9□□□□□ -1.95
SNC1YAL030W UBP15P50101 1230 aa2.9□□□□□ -1.95
SNC1YAL030W ITC1P53125 1264 aa2.9□□□□□ -1.95
SNC1YAL030W LSC2P53312 427 aa2.9□□□□□ -1.95
SNC1YAL030W NAN1Q02931 896 aaKnown RBP2.9□□□□□ -1.95
SNC1YAL030W YLR346CQ06139 101 aa2.9□□□□□ -1.95
SNC1YAL030W RSC2Q06488 889 aa2.9□□□□□ -1.95
SNC1YAL030W TMA46Q12000 345 aaKnown RBP2.9□□□□□ -1.95
SNC1YAL030W CDC53Q12018 815 aaKnown RBP2.9□□□□□ -1.95
SNC1YAL030W YOR131CQ12486 218 aa2.9□□□□□ -1.95
SNC1YAL030W SEC23P15303 768 aaKnown RBP2.89□□□□□ -1.95
SNC1YAL030W PRP5P21372 849 aaPredicted RBP2.89□□□□□ -1.95
SNC1YAL030W NAB2P32505 525 aaKnown RBP RIP-Chip data2.89□□□□□ -1.95not detected
SNC1YAL030W RIM11P38615 370 aa2.89□□□□□ -1.95
SNC1YAL030W APM2P38700 605 aa2.89□□□□□ -1.95
SNC1YAL030W SPF1P39986 1215 aaKnown RBP2.89□□□□□ -1.95
SNC1YAL030W FAA4P47912 694 aaKnown RBP2.89□□□□□ -1.95
SNC1YAL030W GNP1P48813 663 aa2.89□□□□□ -1.95
SNC1YAL030W ALG12P53730 551 aa2.89□□□□□ -1.95
SNC1YAL030W UBP3Q01477 912 aaKnown RBP RIP-Chip data2.89□□□□□ -1.95 RIP-Chip
SNC1YAL030W GDE1Q02979 1223 aa2.89□□□□□ -1.95
SNC1YAL030W OPI10Q08202 246 aa2.89□□□□□ -1.95
SNC1YAL030W GRX1P25373 110 aaKnown RBP2.88□□□□□ -1.95
SNC1YAL030W UGA4P32837 571 aa2.88□□□□□ -1.95
SNC1YAL030W PPG1P32838 368 aa2.88□□□□□ -1.95
SNC1YAL030W DLD1P32891 587 aa2.88□□□□□ -1.95
SNC1YAL030W SQT1P35184 431 aa2.88□□□□□ -1.95
SNC1YAL030W PBP2P38151 413 aaKnown RBP RIP-Chip data2.88□□□□□ -1.95not detected
SNC1YAL030W NCL1P38205 684 aaKnown RBP2.88□□□□□ -1.95
SNC1YAL030W MON1P53129 644 aa2.88□□□□□ -1.95
SNC1YAL030W YGL081WP53156 320 aa2.88□□□□□ -1.95
SNC1YAL030W KRE33P53914 1056 aaKnown RBP2.88□□□□□ -1.95
SNC1YAL030W NOG1Q02892 647 aaKnown RBP2.88□□□□□ -1.95
SNC1YAL030W LCB5Q06147 687 aaKnown RBP2.88□□□□□ -1.95
SNC1YAL030W TDA5Q06417 326 aaKnown RBP2.88□□□□□ -1.95
SNC1YAL030W PPM2Q08282 695 aa2.88□□□□□ -1.95
SNC1YAL030W GCR1P07261 785 aa2.87□□□□□ -1.95
SNC1YAL030W FUS1P11710 512 aa2.87□□□□□ -1.95
SNC1YAL030W IDI1P15496 288 aa2.87□□□□□ -1.95
SNC1YAL030W AGP1P25376 633 aa2.87□□□□□ -1.95
SNC1YAL030W RAD27P26793 382 aa2.87□□□□□ -1.95
SNC1YAL030W DUR3P33413 735 aa2.87□□□□□ -1.95
SNC1YAL030W SHU2P38957 223 aa2.87□□□□□ -1.95
SNC1YAL030W RSM26P47141 266 aa2.87□□□□□ -1.95
SNC1YAL030W PPT1P53043 513 aa2.87□□□□□ -1.95
SNC1YAL030W SIW14P53965 281 aa2.87□□□□□ -1.95
SNC1YAL030W YPL062WQ02781 134 aa2.87□□□□□ -1.95
SNC1YAL030W EEB1Q02891 456 aa2.87□□□□□ -1.95
SNC1YAL030W HEH2Q03281 663 aa2.87□□□□□ -1.95
SNC1YAL030W SHE9Q04172 456 aa2.87□□□□□ -1.95
SNC1YAL030W OPT2Q06593 877 aa2.87□□□□□ -1.95
SNC1YAL030W CMR1Q12510 522 aaKnown RBP2.87□□□□□ -1.95
SNC1YAL030W CDC19P00549 500 aaKnown RBP2.86□□□□□ -1.95
SNC1YAL030W HVG1P0CE11 249 aa2.86□□□□□ -1.95
SNC1YAL030W RAD4P14736 754 aa2.86□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms