RNA–Protein interactions for RNA: YAL021C

CCR4, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CCR4, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCR4YAL021C HSL1P34244 1518 aa8.08□□□□□ -1.12
CCR4YAL021C LEU1P07264 779 aaKnown RBP8.07□□□□□ -1.12
CCR4YAL021C NOC2P39744 710 aaKnown RBP8.07□□□□□ -1.12
CCR4YAL021C BUD27P43573 796 aaKnown RBP RIP-Chip data8.07□□□□□ -1.12not detected
CCR4YAL021C PEX21P50091 288 aa8.07□□□□□ -1.12
CCR4YAL021C YGL081WP53156 320 aa8.07□□□□□ -1.12
CCR4YAL021C FUS2Q05670 677 aa8.07□□□□□ -1.12
CCR4YAL021C SSF2Q12153 453 aaPredicted RBP8.07□□□□□ -1.12
CCR4YAL021C CYB2P00175 591 aa8.07□□□□□ -1.12
CCR4YAL021C CDC37P06101 506 aaKnown RBP8.07□□□□□ -1.12
CCR4YAL021C STE6P12866 1290 aa8.07□□□□□ -1.12
CCR4YAL021C MYO2P19524 1574 aaKnown RBP8.07□□□□□ -1.12
CCR4YAL021C MRPS28P21771 286 aa8.07□□□□□ -1.12
CCR4YAL021C RKM3P38222 552 aa8.07□□□□□ -1.12
CCR4YAL021C SWD1P39706 426 aa8.07□□□□□ -1.12
CCR4YAL021C YER034WP40022 185 aaKnown RBP8.07□□□□□ -1.12
CCR4YAL021C TSC11P40061 1430 aa8.07□□□□□ -1.12
CCR4YAL021C ATG3P40344 310 aa8.07□□□□□ -1.12
CCR4YAL021C RSM25P40496 264 aa8.07□□□□□ -1.12
CCR4YAL021C SNZ1Q03148 297 aa8.07□□□□□ -1.12
CCR4YAL021C SSK22P25390 1331 aaPredicted RBP8.07□□□□□ -1.12
CCR4YAL021C SIT4P20604 311 aa8.06□□□□□ -1.12
CCR4YAL021C CEP3P40969 608 aa8.06□□□□□ -1.12
CCR4YAL021C ALG2P43636 503 aa8.06□□□□□ -1.12
CCR4YAL021C CAF130P53280 1122 aaPredicted RBP8.06□□□□□ -1.12
CCR4YAL021C PET123P17558 318 aa8.06□□□□□ -1.12
CCR4YAL021C PPX1P38698 397 aa8.06□□□□□ -1.12
CCR4YAL021C ETP1P38748 585 aaKnown RBP8.06□□□□□ -1.12
CCR4YAL021C UTP18P40362 594 aaPredicted RBP8.06□□□□□ -1.12
CCR4YAL021C ENP2P48234 707 aaKnown RBP8.06□□□□□ -1.12
CCR4YAL021C ECL1P48235 211 aa8.06□□□□□ -1.12
CCR4YAL021C RIM21P48565 533 aa8.06□□□□□ -1.12
CCR4YAL021C VTI1Q04338 217 aa8.06□□□□□ -1.12
CCR4YAL021C NOC3Q07896 663 aaPredicted RBP8.06□□□□□ -1.12
CCR4YAL021C MET4P32389 672 aa8.05□□□□□ -1.12
CCR4YAL021C APL2P36000 726 aaPredicted RBP8.05□□□□□ -1.12
CCR4YAL021C STU2P46675 888 aa8.05□□□□□ -1.12
CCR4YAL021C UBP3Q01477 912 aaKnown RBP RIP-Chip data8.05□□□□□ -1.12not detected
CCR4YAL021C YKL068W-AQ3E826 78 aa8.05□□□□□ -1.12
CCR4YAL021C CPS1P27614 576 aa8.05□□□□□ -1.12
CCR4YAL021C GCD14P46959 383 aaPredicted RBP8.05□□□□□ -1.12
CCR4YAL021C MDM1Q01846 1127 aa8.05□□□□□ -1.12
CCR4YAL021C GYL1Q04322 720 aa8.05□□□□□ -1.12
CCR4YAL021C HEM1P09950 548 aaPredicted RBP8.04□□□□□ -1.12
CCR4YAL021C MRPL25P23369 157 aa8.04□□□□□ -1.12
CCR4YAL021C MFT1P33441 392 aaKnown RBP8.04□□□□□ -1.12
CCR4YAL021C SKI2P35207 1287 aaKnown RBP RIP-Chip data8.04□□□□□ -1.12not detected
CCR4YAL021C NUP120P35729 1037 aa8.04□□□□□ -1.12
CCR4YAL021C LAM5P43560 674 aa8.04□□□□□ -1.12
CCR4YAL021C DNA2P38859 1522 aa8.04□□□□□ -1.12
CCR4YAL021C SWI1P09547 1314 aa8.04□□□□□ -1.12
CCR4YAL021C TPM1P17536 199 aaKnown RBP8.04□□□□□ -1.12
CCR4YAL021C TPD3P31383 635 aa8.04□□□□□ -1.12
CCR4YAL021C HCS1P34243 683 aa8.04□□□□□ -1.12
CCR4YAL021C TMN3P40071 706 aa8.04□□□□□ -1.12
CCR4YAL021C RIC1P40395 1056 aa8.04□□□□□ -1.12
CCR4YAL021C SRB7P47822 140 aa8.04□□□□□ -1.12
CCR4YAL021C SDA1P53313 767 aaKnown RBP8.04□□□□□ -1.12
CCR4YAL021C PLP1Q04004 230 aa8.04□□□□□ -1.12
CCR4YAL021C TMA64Q04600 565 aaKnown RBP8.04□□□□□ -1.12
CCR4YAL021C SEN2P16658 377 aa8.03□□□□□ -1.12
CCR4YAL021C UGA2P38067 497 aa8.03□□□□□ -1.12
CCR4YAL021C FTR1P40088 404 aa8.03□□□□□ -1.12
CCR4YAL021C IES1P43579 692 aa8.03□□□□□ -1.12
CCR4YAL021C ALD4P46367 519 aaKnown RBP8.03□□□□□ -1.12
CCR4YAL021C CHS5Q12114 671 aaKnown RBP8.03□□□□□ -1.12
CCR4YAL021C RIO1Q12196 484 aaKnown RBP8.03□□□□□ -1.12
CCR4YAL021C YBL111CQ3E7Y5 667 aa8.03□□□□□ -1.12
CCR4YAL021C RFC5P38251 354 aa8.03□□□□□ -1.12
CCR4YAL021C GCD10P41814 478 aa8.03□□□□□ -1.12
CCR4YAL021C VAM6Q07468 1049 aa8.03□□□□□ -1.12
CCR4YAL021C BUD7Q08754 746 aa8.03□□□□□ -1.12
CCR4YAL021C NAT1P12945 854 aaKnown RBP8.02□□□□□ -1.12
CCR4YAL021C OCA4P25366 362 aa8.02□□□□□ -1.12
CCR4YAL021C PLC1P32383 869 aa8.02□□□□□ -1.12
CCR4YAL021C SEC8P32855 1065 aa8.02□□□□□ -1.12
CCR4YAL021C HOP2P53187 214 aa8.02□□□□□ -1.12
CCR4YAL021C TAP42Q04372 366 aa8.02□□□□□ -1.12
CCR4YAL021C BDF2Q07442 638 aa8.02□□□□□ -1.12
CCR4YAL021C TOM20P35180 183 aa8.02□□□□□ -1.13
CCR4YAL021C TAF5P38129 798 aa8.02□□□□□ -1.13
CCR4YAL021C BET4Q00618 327 aa8.02□□□□□ -1.13
CCR4YAL021C MLP2P40457 1679 aa8.02□□□□□ -1.13
CCR4YAL021C APN1P22936 367 aa8.01□□□□□ -1.13
CCR4YAL021C RTT105P40063 208 aa8.01□□□□□ -1.13
CCR4YAL021C IML2P47031 731 aa8.01□□□□□ -1.13
CCR4YAL021C ENT2Q05785 613 aa8.01□□□□□ -1.13
CCR4YAL021C HIS3P06633 220 aa8.01□□□□□ -1.13
CCR4YAL021C BUD2P33314 1104 aa8.01□□□□□ -1.13
CCR4YAL021C PAM1P37304 830 aaKnown RBP8.01□□□□□ -1.13
CCR4YAL021C IOC3P43596 787 aa8.01□□□□□ -1.13
CCR4YAL021C YGL082WP53155 381 aa8.01□□□□□ -1.13
CCR4YAL021C LSC1P53598 329 aaKnown RBP8.01□□□□□ -1.13
CCR4YAL021C NNT1Q05874 261 aa8.01□□□□□ -1.13
CCR4YAL021C COG4Q06096 861 aa8.01□□□□□ -1.13
CCR4YAL021C IQG1Q12280 1495 aa8.01□□□□□ -1.13
CCR4YAL021C NUP170P38181 1502 aa8□□□□□ -1.13
CCR4YAL021C MER1P16523 270 aa8□□□□□ -1.13
CCR4YAL021C PRP22P24384 1145 aaKnown RBP8□□□□□ -1.13
CCR4YAL021C DCP2P53550 970 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 67.3 ms