RNA–Protein interactions for RNA: ENST00000641309.1

CASC19-221, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,382 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-221ENST00000641309 C3orf80F5H4A9 247 aa8.19□□□□□ -1.1
CASC19-221ENST00000641309 RSPH4AQ5TD94 716 aa8.19□□□□□ -1.1
CASC19-221ENST00000641309 SAMD7Q7Z3H4 446 aa8.19□□□□□ -1.1
CASC19-221ENST00000641309 MAGI2Q86UL8 1455 aa8.18□□□□□ -1.1
CASC19-221ENST00000641309 LRRIQ1Q96JM4 1722 aa8.18□□□□□ -1.1
CASC19-221ENST00000641309 SETD1BQ9UPS6 1966 aaKnown RBP8.18□□□□□ -1.1
CASC19-221ENST00000641309 C9orf84Q5VXU9 1444 aa8.18□□□□□ -1.1
CASC19-221ENST00000641309 THSD4Q6ZMP0 1018 aa8.18□□□□□ -1.1
CASC19-221ENST00000641309 SLF2Q8IX21 1173 aa8.18□□□□□ -1.1
CASC19-221ENST00000641309 ARHGEF12Q9NZN5 1544 aa8.17□□□□□ -1.1
CASC19-221ENST00000641309 CDC42BPBQ9Y5S2 1711 aa8.17□□□□□ -1.1
CASC19-221ENST00000641309 PPP4CP60510 307 aa8.17□□□□□ -1.1
CASC19-221ENST00000641309 SWT1Q5T5J6 900 aaKnown RBP8.17□□□□□ -1.1
CASC19-221ENST00000641309 CCDC102AQ96A19 550 aa8.17□□□□□ -1.1
CASC19-221ENST00000641309 AK7Q96M32 723 aa8.17□□□□□ -1.1
CASC19-221ENST00000641309 TMEM134Q9H6X4 195 aa8.17□□□□□ -1.1
CASC19-221ENST00000641309 TIMELESSQ9UNS1 1208 aa8.17□□□□□ -1.1
CASC19-221ENST00000641309 C3P01024 1663 aa8.17□□□□□ -1.1
CASC19-221ENST00000641309 UHRF1BP1Q6BDS2 1440 aa8.16□□□□□ -1.1
CASC19-221ENST00000641309 RNF40O75150 1001 aa8.16□□□□□ -1.1
CASC19-221ENST00000641309 PTPN5P54829 565 aa8.16□□□□□ -1.1
CASC19-221ENST00000641309 SOCS7O14512 581 aa8.15□□□□□ -1.1
CASC19-221ENST00000641309 BCAMP50895 628 aa8.15□□□□□ -1.1
CASC19-221ENST00000641309 HNRNPMP52272 730 aaKnown RBP eCLIP8.15□□□□□ -1.1
CASC19-221ENST00000641309 TSR3Q9UJK0 312 aaKnown RBP8.15□□□□□ -1.1
CASC19-221ENST00000641309 HPS5Q9UPZ3 1129 aa8.15□□□□□ -1.1
CASC19-221ENST00000641309 ZNF518AQ6AHZ1 1483 aa8.14□□□□□ -1.11
CASC19-221ENST00000641309 ARHGAP35Q9NRY4 1499 aa8.14□□□□□ -1.11
CASC19-221ENST00000641309 NYAP1Q6ZVC0 841 aa8.14□□□□□ -1.11
CASC19-221ENST00000641309 ABCA6Q8N139 1617 aa8.14□□□□□ -1.11
CASC19-221ENST00000641309 FMN1Q68DA7 1419 aa8.14□□□□□ -1.11
CASC19-221ENST00000641309 TRAPPC8Q9Y2L5 1435 aa8.14□□□□□ -1.11
CASC19-221ENST00000641309 DIP2CQ9Y2E4 1556 aa8.14□□□□□ -1.11
CASC19-221ENST00000641309 SUPT6HQ7KZ85 1726 aaKnown RBP8.14□□□□□ -1.11
CASC19-221ENST00000641309 IFFO2Q5TF58 517 aa8.13□□□□□ -1.11
CASC19-221ENST00000641309 SULF1Q8IWU6 871 aa8.13□□□□□ -1.11
CASC19-221ENST00000641309 CLIP1P30622 1438 aa8.13□□□□□ -1.11
CASC19-221ENST00000641309 UBAP1LF5GYI3 381 aa8.12□□□□□ -1.11
CASC19-221ENST00000641309 GGT6Q6P531 493 aa8.12□□□□□ -1.11
CASC19-221ENST00000641309 SLC24A3Q9HC58 644 aa8.12□□□□□ -1.11
CASC19-221ENST00000641309 TROQ12816 1431 aaPredicted RBP8.12□□□□□ -1.11
CASC19-221ENST00000641309 CEP162Q5TB80 1403 aa8.12□□□□□ -1.11
CASC19-221ENST00000641309 CLCN1P35523 988 aa8.11□□□□□ -1.11
CASC19-221ENST00000641309 PRR14Q9BWN1 585 aa8.11□□□□□ -1.11
CASC19-221ENST00000641309 GTF3C3Q9Y5Q9 886 aa8.11□□□□□ -1.11
CASC19-221ENST00000641309 ZNF335Q9H4Z2 1342 aaPredicted RBP8.11□□□□□ -1.11
CASC19-221ENST00000641309 SPATA31D1Q6ZQQ2 1576 aa8.11□□□□□ -1.11
CASC19-221ENST00000641309 KIDINS220Q9ULH0 1771 aa8.11□□□□□ -1.11
CASC19-221ENST00000641309 MDM2Q00987 491 aaPredicted RBP8.1□□□□□ -1.11
CASC19-221ENST00000641309 TTLL12Q14166 644 aaPredicted RBP8.1□□□□□ -1.11
CASC19-221ENST00000641309 PHOX2BQ99453 314 aa8.1□□□□□ -1.11
CASC19-221ENST00000641309 WBP1LQ9NX94 342 aa8.1□□□□□ -1.11
CASC19-221ENST00000641309 ITSN2Q9NZM3 1697 aa8.1□□□□□ -1.11
CASC19-221ENST00000641309 CDC42BPAQ5VT25 1732 aa8.1□□□□□ -1.11
CASC19-221ENST00000641309 KDM5CP41229 1560 aa8.1□□□□□ -1.11
CASC19-221ENST00000641309 CAMSAP1Q5T5Y3 1602 aa8.1□□□□□ -1.11
CASC19-221ENST00000641309 TRIM66O15016 1216 aa8.1□□□□□ -1.11
CASC19-221ENST00000641309 PIP4K2BP78356 416 aa8.1□□□□□ -1.11
CASC19-221ENST00000641309 GPCPD1Q9NPB8 672 aa8.1□□□□□ -1.11
CASC19-221ENST00000641309 CLTCQ00610 1675 aaKnown RBP8.09□□□□□ -1.11
CASC19-221ENST00000641309 DDX11L8A8MPP1 907 aa8.09□□□□□ -1.12
CASC19-221ENST00000641309 RDH13Q8NBN7 331 aa8.09□□□□□ -1.12
CASC19-221ENST00000641309 SPAG9O60271 1321 aaKnown RBP8.08□□□□□ -1.12
CASC19-221ENST00000641309 PREX2Q70Z35 1606 aa8.08□□□□□ -1.12
CASC19-221ENST00000641309 LTBP4Q8N2S1 1624 aa8.08□□□□□ -1.12
CASC19-221ENST00000641309 ZMYM3Q14202 1370 aa8.08□□□□□ -1.12
CASC19-221ENST00000641309 PTPRTO14522 1441 aa8.08□□□□□ -1.12
CASC19-221ENST00000641309 AMHR2Q16671 573 aa8.08□□□□□ -1.12
CASC19-221ENST00000641309 KMT5BQ4FZB7 885 aa8.08□□□□□ -1.12
CASC19-221ENST00000641309 NLRP7Q8WX94 980 aa8.08□□□□□ -1.12
CASC19-221ENST00000641309 MLH3Q9UHC1 1453 aa8.07□□□□□ -1.12
CASC19-221ENST00000641309 ABCC1P33527 1531 aa8.07□□□□□ -1.12
CASC19-221ENST00000641309 CFDP1Q9UEE9 299 aaPredicted RBP8.07□□□□□ -1.12
CASC19-221ENST00000641309 ZNF644Q9H582 1327 aaPredicted RBP8.07□□□□□ -1.12
CASC19-221ENST00000641309 NCOA1Q15788 1441 aa8.06□□□□□ -1.12
CASC19-221ENST00000641309 SYCP2Q9BX26 1530 aa8.06□□□□□ -1.12
CASC19-221ENST00000641309 SAMD9LQ8IVG5 1584 aa8.05□□□□□ -1.12
CASC19-221ENST00000641309 IRX2Q9BZI1 471 aaPredicted RBP8.05□□□□□ -1.12
CASC19-221ENST00000641309 CFAP65Q6ZU64 1925 aaKnown RBP8.05□□□□□ -1.12
CASC19-221ENST00000641309 HSPA1LP34931 641 aa8.04□□□□□ -1.12
CASC19-221ENST00000641309 PDE4DQ08499 809 aa8.04□□□□□ -1.12
CASC19-221ENST00000641309 FBXO31Q5XUX0 539 aaPredicted RBP8.04□□□□□ -1.12
CASC19-221ENST00000641309 AGLP35573 1532 aa8.04□□□□□ -1.12
CASC19-221ENST00000641309 CASKIN1Q8WXD9 1431 aa8.04□□□□□ -1.12
CASC19-221ENST00000641309 REREQ9P2R6 1566 aa8.03□□□□□ -1.12
CASC19-221ENST00000641309 CCDC18Q5T9S5 1454 aa8.03□□□□□ -1.12
CASC19-221ENST00000641309 VPS8Q8N3P4 1428 aa8.03□□□□□ -1.12
CASC19-221ENST00000641309 CNTLNQ9NXG0 1405 aa8.03□□□□□ -1.12
CASC19-221ENST00000641309 CCNB3Q8WWL7 1395 aa8.03□□□□□ -1.12
CASC19-221ENST00000641309 CFHP08603 1231 aa8.03□□□□□ -1.12
CASC19-221ENST00000641309 SLC10A3P09131 477 aa8.03□□□□□ -1.12
CASC19-221ENST00000641309 SSTR3P32745 418 aaPredicted RBP8.03□□□□□ -1.12
CASC19-221ENST00000641309 GPATCH8Q9UKJ3 1502 aaKnown RBP8.02□□□□□ -1.12
CASC19-221ENST00000641309 KIF3BO15066 747 aa8.02□□□□□ -1.13
CASC19-221ENST00000641309 TMEM132AQ24JP5 1023 aa8.02□□□□□ -1.13
CASC19-221ENST00000641309 GRIPAP1Q4V328 841 aa8.02□□□□□ -1.13
CASC19-221ENST00000641309 TMUB1Q9BVT8 246 aa8.02□□□□□ -1.13
CASC19-221ENST00000641309 FAM217BQ9NTX9 383 aaPredicted RBP8.02□□□□□ -1.13
CASC19-221ENST00000641309 MROH2AA6NES4 1674 aa8.02□□□□□ -1.13
CASC19-221ENST00000641309 MYO3AQ8NEV4 1616 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms