RNA–Protein interactions for RNA: ENST00000639895.1

SPIN3-231, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 4,234 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-231	ENST00000639895	ADCY5	O95622	1261 aa		13.69	□□□□□ -0.22
SPIN3-231	ENST00000639895	TNNT1	P13805	278 aa		13.69	□□□□□ -0.22
SPIN3-231	ENST00000639895	FAM184A	Q8NB25	1140 aa		13.69	□□□□□ -0.22
SPIN3-231	ENST00000639895	CAMSAP2	Q08AD1	1489 aa		13.69	□□□□□ -0.22
SPIN3-231	ENST00000639895	RBM25	P49756	843 aa	Known RBP	13.69	□□□□□ -0.22
SPIN3-231	ENST00000639895	NEK4	P51957	841 aa		13.69	□□□□□ -0.22
SPIN3-231	ENST00000639895	CWC22	Q9HCG8	908 aa	Known RBP	13.68	□□□□□ -0.22
SPIN3-231	ENST00000639895	OGFR	Q9NZT2	677 aa		13.68	□□□□□ -0.22
SPIN3-231	ENST00000639895	ATP6V1D	Q9Y5K8	247 aa		13.68	□□□□□ -0.22
SPIN3-231	ENST00000639895	FIBP	O43427	364 aa		13.68	□□□□□ -0.22
SPIN3-231	ENST00000639895	PPP2R1A	P30153	589 aa		13.68	□□□□□ -0.22
SPIN3-231	ENST00000639895	LRSAM1	Q6UWE0	723 aa		13.68	□□□□□ -0.22
SPIN3-231	ENST00000639895	FEZ1	Q99689	392 aa		13.68	□□□□□ -0.22
SPIN3-231	ENST00000639895	TMX1	Q9H3N1	280 aa		13.68	□□□□□ -0.22
SPIN3-231	ENST00000639895	NOL10	Q9BSC4	688 aa	Known RBP	13.67	□□□□□ -0.22
SPIN3-231	ENST00000639895	SENP3	Q9H4L4	574 aa	Predicted RBP	13.67	□□□□□ -0.22
SPIN3-231	ENST00000639895	BCL2L12	Q9HB09	334 aa		13.67	□□□□□ -0.22
SPIN3-231	ENST00000639895	CCDC27	Q2M243	656 aa		13.66	□□□□□ -0.22
SPIN3-231	ENST00000639895	LEKR1	Q6ZMV7	388 aa		13.66	□□□□□ -0.22
SPIN3-231	ENST00000639895	ELL2	O00472	640 aa	Predicted RBP	13.66	□□□□□ -0.22
SPIN3-231	ENST00000639895	LRPPRC	P42704	1394 aa	Known RBP	13.66	□□□□□ -0.22
SPIN3-231	ENST00000639895	PCDHB15	Q9Y5E8	787 aa		13.66	□□□□□ -0.22
SPIN3-231	ENST00000639895	TPM4	P67936	248 aa		13.66	□□□□□ -0.22
SPIN3-231	ENST00000639895	INTS3	Q68E01	1043 aa	Known RBP	13.66	□□□□□ -0.22
SPIN3-231	ENST00000639895	RBM42	Q9BTD8	480 aa	Known RBP	13.66	□□□□□ -0.22
SPIN3-231	ENST00000639895	AK7	Q96M32	723 aa		13.65	□□□□□ -0.22
SPIN3-231	ENST00000639895	GDPD2	Q9HCC8	539 aa		13.65	□□□□□ -0.22
SPIN3-231	ENST00000639895	SAMD9	Q5K651	1589 aa		13.65	□□□□□ -0.22
SPIN3-231	ENST00000639895	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	13.65	□□□□□ -0.22
SPIN3-231	ENST00000639895		V9GYY5	206 aa	Predicted RBP	13.65	□□□□□ -0.22
SPIN3-231	ENST00000639895	SPAG9	O60271	1321 aa	Known RBP	13.64	□□□□□ -0.23
SPIN3-231	ENST00000639895	PLB1	Q6P1J6	1458 aa		13.64	□□□□□ -0.23
SPIN3-231	ENST00000639895	MVP	Q14764	893 aa	Known RBP	13.64	□□□□□ -0.23
SPIN3-231	ENST00000639895	SMC5	Q8IY18	1101 aa		13.64	□□□□□ -0.23
SPIN3-231	ENST00000639895	C10orf67	Q8IYJ2	551 aa		13.64	□□□□□ -0.23
SPIN3-231	ENST00000639895	VPS37C	A5D8V6	355 aa	Predicted RBP	13.63	□□□□□ -0.23
SPIN3-231	ENST00000639895	GAS2L2	Q8NHY3	880 aa		13.63	□□□□□ -0.23
SPIN3-231	ENST00000639895	RIOK3	O14730	519 aa	Known RBP	13.63	□□□□□ -0.23
SPIN3-231	ENST00000639895	NGEF	Q8N5V2	710 aa		13.63	□□□□□ -0.23
SPIN3-231	ENST00000639895	ANO2	Q9NQ90	1003 aa		13.63	□□□□□ -0.23
SPIN3-231	ENST00000639895	SYNJ2	O15056	1496 aa		13.63	□□□□□ -0.23
SPIN3-231	ENST00000639895	HCLS1	P14317	486 aa	Predicted RBP	13.63	□□□□□ -0.23
SPIN3-231	ENST00000639895	GRIN2A	Q12879	1464 aa		13.63	□□□□□ -0.23
SPIN3-231	ENST00000639895	ZSCAN20	P17040	1043 aa	Predicted RBP	13.63	□□□□□ -0.23
SPIN3-231	ENST00000639895	SRPK2	P78362	688 aa	Known RBP	13.63	□□□□□ -0.23
SPIN3-231	ENST00000639895	GABPB1	Q06547	395 aa	Predicted RBP	13.63	□□□□□ -0.23
SPIN3-231	ENST00000639895	RILPL2	Q969X0	211 aa		13.63	□□□□□ -0.23
SPIN3-231	ENST00000639895	ZBTB9	Q96C00	473 aa		13.63	□□□□□ -0.23
SPIN3-231	ENST00000639895	STAG3	Q9UJ98	1225 aa		13.62	□□□□□ -0.23
SPIN3-231	ENST00000639895	JARID2	Q92833	1246 aa	Predicted RBP	13.62	□□□□□ -0.23
SPIN3-231	ENST00000639895	FBXW7	Q969H0	707 aa		13.62	□□□□□ -0.23
SPIN3-231	ENST00000639895	C1orf115	Q9H7X2	142 aa		13.61	□□□□□ -0.23
SPIN3-231	ENST00000639895	CHD1L	Q86WJ1	897 aa		13.61	□□□□□ -0.23
SPIN3-231	ENST00000639895	ABCA5	Q8WWZ7	1642 aa		13.61	□□□□□ -0.23
SPIN3-231	ENST00000639895	WDR62	O43379	1518 aa		13.61	□□□□□ -0.23
SPIN3-231	ENST00000639895	ZNF608	Q9ULD9	1512 aa	Predicted RBP	13.61	□□□□□ -0.23
SPIN3-231	ENST00000639895	TCP11L2	Q8N4U5	519 aa		13.61	□□□□□ -0.23
SPIN3-231	ENST00000639895	BICD2	Q8TD16	824 aa		13.6	□□□□□ -0.23
SPIN3-231	ENST00000639895	KIF3B	O15066	747 aa		13.6	□□□□□ -0.23
SPIN3-231	ENST00000639895	CCDC192	P0DO97	292 aa		13.6	□□□□□ -0.23
SPIN3-231	ENST00000639895	HSP90B2P	Q58FF3	399 aa		13.6	□□□□□ -0.23
SPIN3-231	ENST00000639895	ZNF445	P59923	1031 aa		13.6	□□□□□ -0.23
SPIN3-231	ENST00000639895	ATP2B3	Q16720	1220 aa		13.6	□□□□□ -0.23
SPIN3-231	ENST00000639895	FILIP1	Q7Z7B0	1213 aa		13.6	□□□□□ -0.23
SPIN3-231	ENST00000639895	PIBF1	Q8WXW3	757 aa		13.6	□□□□□ -0.23
SPIN3-231	ENST00000639895	RASSF4	Q9H2L5	321 aa		13.6	□□□□□ -0.23
SPIN3-231	ENST00000639895	NUP153	P49790	1475 aa	Known RBP	13.59	□□□□□ -0.23
SPIN3-231	ENST00000639895	TMCO3	Q6UWJ1	677 aa		13.59	□□□□□ -0.23
SPIN3-231	ENST00000639895	SNX21	Q969T3	373 aa		13.59	□□□□□ -0.23
SPIN3-231	ENST00000639895	PTPN14	Q15678	1187 aa		13.59	□□□□□ -0.23
SPIN3-231	ENST00000639895	KIF21A	Q7Z4S6	1674 aa		13.59	□□□□□ -0.23
SPIN3-231	ENST00000639895	RSPH14	Q9UHP6	348 aa		13.59	□□□□□ -0.23
SPIN3-231	ENST00000639895	SMC3	Q9UQE7	1217 aa		13.59	□□□□□ -0.23
SPIN3-231	ENST00000639895	NINL	Q9Y2I6	1382 aa		13.59	□□□□□ -0.23
SPIN3-231	ENST00000639895		H0YHG0	523 aa		13.58	□□□□□ -0.24
SPIN3-231	ENST00000639895	CALR	P27797	417 aa	Known RBP	13.58	□□□□□ -0.24
SPIN3-231	ENST00000639895	DHX29	Q7Z478	1369 aa	Known RBP	13.58	□□□□□ -0.24
SPIN3-231	ENST00000639895	RARS	P54136	660 aa	Known RBP	13.58	□□□□□ -0.24
SPIN3-231	ENST00000639895	UBXN4	Q92575	508 aa		13.58	□□□□□ -0.24
SPIN3-231	ENST00000639895	RUNDC1	Q96C34	613 aa		13.58	□□□□□ -0.24
SPIN3-231	ENST00000639895	MAGI3	Q5TCQ9	1506 aa		13.58	□□□□□ -0.24
SPIN3-231	ENST00000639895	GPATCH8	Q9UKJ3	1502 aa	Known RBP	13.58	□□□□□ -0.24
SPIN3-231	ENST00000639895	ADAMTS12	P58397	1594 aa		13.58	□□□□□ -0.24
SPIN3-231	ENST00000639895	BMS1	Q14692	1282 aa	Known RBP	13.57	□□□□□ -0.24
SPIN3-231	ENST00000639895	TRMT1	Q9NXH9	659 aa	Known RBP	13.57	□□□□□ -0.24
SPIN3-231	ENST00000639895	RAPGEF6	Q8TEU7	1601 aa		13.57	□□□□□ -0.24
SPIN3-231	ENST00000639895	ARHGEF11	O15085	1522 aa		13.57	□□□□□ -0.24
SPIN3-231	ENST00000639895	MAGI1	Q96QZ7	1491 aa	Predicted RBP	13.57	□□□□□ -0.24
SPIN3-231	ENST00000639895	LMOD3	Q0VAK6	560 aa		13.57	□□□□□ -0.24
SPIN3-231	ENST00000639895	TSR2	Q969E8	191 aa	Known RBP	13.57	□□□□□ -0.24
SPIN3-231	ENST00000639895	ARHGAP5	Q13017	1502 aa		13.57	□□□□□ -0.24
SPIN3-231	ENST00000639895	HAP1	P54257	671 aa	Predicted RBP	13.56	□□□□□ -0.24
SPIN3-231	ENST00000639895	HDAC5	Q9UQL6	1122 aa		13.56	□□□□□ -0.24
SPIN3-231	ENST00000639895	NKTR	P30414	1462 aa	Known RBP	13.56	□□□□□ -0.24
SPIN3-231	ENST00000639895	HSP90AB3P	Q58FF7	597 aa		13.56	□□□□□ -0.24
SPIN3-231	ENST00000639895	DHX37	Q8IY37	1157 aa	Known RBP	13.56	□□□□□ -0.24
SPIN3-231	ENST00000639895	GTF3C6	Q969F1	213 aa		13.56	□□□□□ -0.24
SPIN3-231	ENST00000639895	LMAN1	P49257	510 aa		13.55	□□□□□ -0.24
SPIN3-231	ENST00000639895	EXOSC9	Q06265	439 aa	Known RBP	13.55	□□□□□ -0.24
SPIN3-231	ENST00000639895	OS9	Q13438	667 aa	Predicted RBP	13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms