RNA–Protein interactions for RNA: ENST00000638443.1

ATM-226, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 2,146 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-226ENST00000638443 FYB1O15117 783 aa13.2□□□□□ -0.3
ATM-226ENST00000638443 SHPRHQ149N8 1683 aa13.2□□□□□ -0.3
ATM-226ENST00000638443 KCNA6P17658 529 aa13.19□□□□□ -0.3
ATM-226ENST00000638443 HDGFL2Q7Z4V5 671 aaPredicted RBP13.19□□□□□ -0.3
ATM-226ENST00000638443 SIRT1Q96EB6 747 aa13.19□□□□□ -0.3
ATM-226ENST00000638443 NKTRP30414 1462 aaKnown RBP13.19□□□□□ -0.3
ATM-226ENST00000638443 FBLN1P23142 703 aa13.19□□□□□ -0.3
ATM-226ENST00000638443 BBXQ8WY36 941 aaPredicted RBP13.19□□□□□ -0.3
ATM-226ENST00000638443 RBM33Q96EV2 1170 aaKnown RBP13.19□□□□□ -0.3
ATM-226ENST00000638443 PTCH1Q13635 1447 aa13.18□□□□□ -0.3
ATM-226ENST00000638443 CDC42BPGQ6DT37 1551 aa13.18□□□□□ -0.3
ATM-226ENST00000638443 MTHFSP49914 203 aa13.18□□□□□ -0.3
ATM-226ENST00000638443 NSD2O96028 1365 aa13.18□□□□□ -0.3
ATM-226ENST00000638443 KIF20BQ96Q89 1820 aa13.18□□□□□ -0.3
ATM-226ENST00000638443 CPSF1Q10570 1443 aaKnown RBP13.17□□□□□ -0.3
ATM-226ENST00000638443 ANKRD26Q9UPS8 1709 aa13.17□□□□□ -0.3
ATM-226ENST00000638443 ANKLE2Q86XL3 938 aa13.17□□□□□ -0.3
ATM-226ENST00000638443 CDCA7LQ96GN5 454 aa13.17□□□□□ -0.3
ATM-226ENST00000638443 ZRANB1Q9UGI0 708 aa13.17□□□□□ -0.3
ATM-226ENST00000638443 POLR3AO14802 1390 aaPredicted RBP13.17□□□□□ -0.3
ATM-226ENST00000638443 SMG6Q86US8 1419 aaKnown RBP13.17□□□□□ -0.3
ATM-226ENST00000638443 NUDCQ9Y266 331 aa13.16□□□□□ -0.3
ATM-226ENST00000638443 TOPAZ1Q8N9V7 1692 aa13.16□□□□□ -0.3
ATM-226ENST00000638443 NME9Q86XW9 330 aa13.16□□□□□ -0.3
ATM-226ENST00000638443 CCDC61Q9Y6R9 512 aa13.16□□□□□ -0.3
ATM-226ENST00000638443 SLC4A2P04920 1241 aa13.15□□□□□ -0.3
ATM-226ENST00000638443 MON2Q7Z3U7 1717 aa13.15□□□□□ -0.3
ATM-226ENST00000638443 INSRP06213 1382 aa13.14□□□□□ -0.31
ATM-226ENST00000638443 ITSN1Q15811 1721 aa13.14□□□□□ -0.31
ATM-226ENST00000638443 AKAP12Q02952 1782 aa13.14□□□□□ -0.31
ATM-226ENST00000638443 NEFLP07196 543 aa13.13□□□□□ -0.31
ATM-226ENST00000638443 EDC4Q6P2E9 1401 aaKnown RBP13.13□□□□□ -0.31
ATM-226ENST00000638443 SETD1BQ9UPS6 1966 aaKnown RBP13.13□□□□□ -0.31
ATM-226ENST00000638443 NPHP4O75161 1426 aaPredicted RBP13.13□□□□□ -0.31
ATM-226ENST00000638443 RGPD8O14715 1765 aaPredicted RBP13.12□□□□□ -0.31
ATM-226ENST00000638443 NALCNQ8IZF0 1738 aa13.12□□□□□ -0.31
ATM-226ENST00000638443 IGSF3O75054 1194 aa13.12□□□□□ -0.31
ATM-226ENST00000638443 PMFBP1Q8TBY8 1022 aa13.12□□□□□ -0.31
ATM-226ENST00000638443 RNF216Q9NWF9 866 aaPredicted RBP13.12□□□□□ -0.31
ATM-226ENST00000638443 NRKQ7Z2Y5 1582 aa13.12□□□□□ -0.31
ATM-226ENST00000638443 ACEP12821 1306 aa13.12□□□□□ -0.31
ATM-226ENST00000638443 COL3A1P02461 1466 aaPredicted RBP13.12□□□□□ -0.31
ATM-226ENST00000638443 CHD2O14647 1828 aaKnown RBP13.12□□□□□ -0.31
ATM-226ENST00000638443 APAF1O14727 1248 aa13.12□□□□□ -0.31
ATM-226ENST00000638443 PIK3R4Q99570 1358 aa13.1□□□□□ -0.31
ATM-226ENST00000638443 PPM1GO15355 546 aaPredicted RBP13.09□□□□□ -0.31
ATM-226ENST00000638443 RRP7AQ9Y3A4 280 aaKnown RBP13.09□□□□□ -0.31
ATM-226ENST00000638443 EMILIN1Q9Y6C2 1016 aa13.09□□□□□ -0.31
ATM-226ENST00000638443 USP6P35125 1406 aa13.08□□□□□ -0.32
ATM-226ENST00000638443 HSPA2P54652 639 aa13.08□□□□□ -0.32
ATM-226ENST00000638443 CFAP53Q96M91 514 aa13.08□□□□□ -0.32
ATM-226ENST00000638443 DMRT2Q9Y5R5 561 aa13.08□□□□□ -0.32
ATM-226ENST00000638443 ZNF521Q96K83 1311 aa13.08□□□□□ -0.32
ATM-226ENST00000638443 FMN2Q9NZ56 1722 aa13.07□□□□□ -0.32
ATM-226ENST00000638443 IQSEC2Q5JU85 1478 aa13.07□□□□□ -0.32
ATM-226ENST00000638443 U2SURPO15042 1029 aaKnown RBP13.07□□□□□ -0.32
ATM-226ENST00000638443 RRS1Q15050 365 aaKnown RBP13.07□□□□□ -0.32
ATM-226ENST00000638443 NEUROD2Q15784 382 aa13.07□□□□□ -0.32
ATM-226ENST00000638443 SPINK5Q9NQ38 1064 aaPredicted RBP13.07□□□□□ -0.32
ATM-226ENST00000638443 POLKQ9UBT6 870 aa13.07□□□□□ -0.32
ATM-226ENST00000638443 TTC21BQ7Z4L5 1316 aa13.07□□□□□ -0.32
ATM-226ENST00000638443 PLEKHG3A1L390 1219 aa13.06□□□□□ -0.32
ATM-226ENST00000638443 U2AF1L5P0DN76 240 aaPredicted RBP13.06□□□□□ -0.32
ATM-226ENST00000638443 U2AF1Q01081 240 aaKnown RBP eCLIP13.06□□□□□ -0.32
ATM-226ENST00000638443 CHMP4AQ9BY43 222 aa13.06□□□□□ -0.32
ATM-226ENST00000638443 KDM4FA0A1W2PPD8 638 aa13.05□□□□□ -0.32
ATM-226ENST00000638443 SOX12O15370 315 aa13.04□□□□□ -0.32
ATM-226ENST00000638443 PDE3BQ13370 1112 aa13.04□□□□□ -0.32
ATM-226ENST00000638443 COG3Q96JB2 828 aa13.04□□□□□ -0.32
ATM-226ENST00000638443 MAP2P11137 1827 aaKnown RBP13.04□□□□□ -0.32
ATM-226ENST00000638443 OVOS2A0A0J9YW53 1432 aa13.04□□□□□ -0.32
ATM-226ENST00000638443 OVOS2Q6IE36 1432 aa13.04□□□□□ -0.32
ATM-226ENST00000638443 SSH2Q76I76 1423 aa13.04□□□□□ -0.32
ATM-226ENST00000638443 NGDNQ8NEJ9 315 aaKnown RBP13.04□□□□□ -0.32
ATM-226ENST00000638443 ZNF692Q9BU19 519 aaPredicted RBP13.04□□□□□ -0.32
ATM-226ENST00000638443 PNPLA6Q8IY17 1366 aa13.04□□□□□ -0.32
ATM-226ENST00000638443 TCP11L2Q8N4U5 519 aa13.03□□□□□ -0.32
ATM-226ENST00000638443 CCDC9Q9Y3X0 531 aaKnown RBP13.03□□□□□ -0.32
ATM-226ENST00000638443 ADGRL3Q9HAR2 1447 aa13.03□□□□□ -0.32
ATM-226ENST00000638443 NWD1Q149M9 1564 aa13.03□□□□□ -0.32
ATM-226ENST00000638443 RUNDC1Q96C34 613 aa13.03□□□□□ -0.32
ATM-226ENST00000638443 DUSP27Q5VZP5 1158 aa13.02□□□□□ -0.33
ATM-226ENST00000638443 RCAN3Q9UKA8 241 aa13.02□□□□□ -0.33
ATM-226ENST00000638443 RNF123Q5XPI4 1314 aa13.02□□□□□ -0.33
ATM-226ENST00000638443 ANKARQ7Z5J8 1434 aa13.02□□□□□ -0.33
ATM-226ENST00000638443 PIK3C2AO00443 1686 aa13.02□□□□□ -0.33
ATM-226ENST00000638443 DIAPH1O60610 1272 aaKnown RBP13.01□□□□□ -0.33
ATM-226ENST00000638443 GOLGA2Q08379 1002 aa13.01□□□□□ -0.33
ATM-226ENST00000638443 LRRC7Q96NW7 1537 aa13.01□□□□□ -0.33
ATM-226ENST00000638443 NUTM2GQ5VZR2 741 aa13.01□□□□□ -0.33
ATM-226ENST00000638443 WWC1Q8IX03 1113 aa13□□□□□ -0.33
ATM-226ENST00000638443 STRCP1A6NGW2 1772 aa13□□□□□ -0.33
ATM-226ENST00000638443 PEAK1Q9H792 1746 aa13□□□□□ -0.33
ATM-226ENST00000638443 CDK12Q9NYV4 1490 aaPredicted RBP13□□□□□ -0.33
ATM-226ENST00000638443 AATKQ6ZMQ8 1374 aa13□□□□□ -0.33
ATM-226ENST00000638443 PLEKHF1Q96S99 279 aa13□□□□□ -0.33
ATM-226ENST00000638443 HMOX1P09601 288 aa12.99□□□□□ -0.33
ATM-226ENST00000638443 SLFN5Q08AF3 891 aa12.99□□□□□ -0.33
ATM-226ENST00000638443 LMTK3Q96Q04 1460 aa12.99□□□□□ -0.33
ATM-226ENST00000638443 PLIN1O60240 522 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms